RNA–Protein interactions for RNA: ENST00000469455.1

TMC1-203, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-203ENST00000469455 CDK13Q14004 1512 aaKnown RBP10.56□□□□□ -0.72
TMC1-203ENST00000469455 ZCCHC11Q5TAX3 1644 aaKnown RBP10.55□□□□□ -0.72
TMC1-203ENST00000469455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.55□□□□□ -0.72
TMC1-203ENST00000469455 KDM5BQ9UGL1 1544 aa10.54□□□□□ -0.72
TMC1-203ENST00000469455 DIXDC1Q155Q3 683 aa10.54□□□□□ -0.72
TMC1-203ENST00000469455 COL9A1P20849 921 aa10.53□□□□□ -0.72
TMC1-203ENST00000469455 MYSM1Q5VVJ2 828 aa10.53□□□□□ -0.72
TMC1-203ENST00000469455 PROCA1Q8NCQ7 364 aaPredicted RBP10.53□□□□□ -0.72
TMC1-203ENST00000469455 POLR3EQ9NVU0 708 aa10.53□□□□□ -0.72
TMC1-203ENST00000469455 FAM198AQ9UFP1 575 aa10.53□□□□□ -0.72
TMC1-203ENST00000469455 TTBK1Q5TCY1 1321 aaPredicted RBP10.53□□□□□ -0.72
TMC1-203ENST00000469455 PPP1R3GB7ZBB8 358 aa10.52□□□□□ -0.73
TMC1-203ENST00000469455 PTPREP23469 700 aa10.52□□□□□ -0.73
TMC1-203ENST00000469455 EYA1Q99502 592 aa10.52□□□□□ -0.73
TMC1-203ENST00000469455 ATP1B4Q9UN42 357 aaPredicted RBP10.52□□□□□ -0.73
TMC1-203ENST00000469455 ATP10BO94823 1461 aa10.52□□□□□ -0.73
TMC1-203ENST00000469455 MAGI3Q5TCQ9 1506 aa10.52□□□□□ -0.73
TMC1-203ENST00000469455 LRRC9Q6ZRR7 1453 aa10.51□□□□□ -0.73
TMC1-203ENST00000469455 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
TMC1-203ENST00000469455 SNPHO15079 494 aa10.51□□□□□ -0.73
TMC1-203ENST00000469455 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.51□□□□□ -0.73
TMC1-203ENST00000469455 EHBP1L1Q8N3D4 1523 aa10.51□□□□□ -0.73
TMC1-203ENST00000469455 TBC1D2Q9BYX2 928 aa10.5□□□□□ -0.73
TMC1-203ENST00000469455 TSKSQ9UJT2 592 aa10.5□□□□□ -0.73
TMC1-203ENST00000469455 A6NJR5 290 aa10.49□□□□□ -0.73
TMC1-203ENST00000469455 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
TMC1-203ENST00000469455 SUPT6HQ7KZ85 1726 aaKnown RBP10.49□□□□□ -0.73
TMC1-203ENST00000469455 HOXB1P14653 301 aaPredicted RBP10.48□□□□□ -0.73
TMC1-203ENST00000469455 MCM6Q14566 821 aa10.48□□□□□ -0.73
TMC1-203ENST00000469455 NUDT18Q6ZVK8 323 aa10.48□□□□□ -0.73
TMC1-203ENST00000469455 TRIM6-TRIM34B2RNG4 842 aa10.47□□□□□ -0.73
TMC1-203ENST00000469455 NBPF26B4DH59 902 aa10.47□□□□□ -0.73
TMC1-203ENST00000469455 PACS2Q86VP3 889 aa10.47□□□□□ -0.73
TMC1-203ENST00000469455 SULF1Q8IWU6 871 aa10.47□□□□□ -0.73
TMC1-203ENST00000469455 CD46P15529 392 aa10.46□□□□□ -0.73
TMC1-203ENST00000469455 DNAJB2P25686 324 aa10.46□□□□□ -0.73
TMC1-203ENST00000469455 TATDN2Q93075 761 aa10.46□□□□□ -0.73
TMC1-203ENST00000469455 TROQ12816 1431 aaPredicted RBP10.46□□□□□ -0.74
TMC1-203ENST00000469455 MAPKBP1O60336 1514 aa10.46□□□□□ -0.74
TMC1-203ENST00000469455 KIF14Q15058 1648 aa10.46□□□□□ -0.74
TMC1-203ENST00000469455 KANK4Q5T7N3 995 aaPredicted RBP10.45□□□□□ -0.74
TMC1-203ENST00000469455 CCER1Q8TC90 406 aaPredicted RBP10.45□□□□□ -0.74
TMC1-203ENST00000469455 PNMA3Q9UL41 463 aa10.45□□□□□ -0.74
TMC1-203ENST00000469455 MTUS2Q5JR59 1369 aa10.44□□□□□ -0.74
TMC1-203ENST00000469455 ARID3CA6NKF2 412 aa10.44□□□□□ -0.74
TMC1-203ENST00000469455 CYB5RLQ6IPT4 315 aa10.44□□□□□ -0.74
TMC1-203ENST00000469455 SPIRE2Q8WWL2 714 aa10.44□□□□□ -0.74
TMC1-203ENST00000469455 CLUAP1Q96AJ1 413 aa10.44□□□□□ -0.74
TMC1-203ENST00000469455 WDR7Q9Y4E6 1490 aa10.43□□□□□ -0.74
TMC1-203ENST00000469455 C3orf80F5H4A9 247 aa10.43□□□□□ -0.74
TMC1-203ENST00000469455 TMEM134Q9H6X4 195 aa10.43□□□□□ -0.74
TMC1-203ENST00000469455 C1orf115Q9H7X2 142 aa10.43□□□□□ -0.74
TMC1-203ENST00000469455 CDC42BPAQ5VT25 1732 aa10.42□□□□□ -0.74
TMC1-203ENST00000469455 ITSN2Q9NZM3 1697 aa10.42□□□□□ -0.74
TMC1-203ENST00000469455 APBB1O00213 710 aa10.42□□□□□ -0.74
TMC1-203ENST00000469455 TRAK2O60296 914 aa10.42□□□□□ -0.74
TMC1-203ENST00000469455 TUSC1Q2TAM9 212 aa10.42□□□□□ -0.74
TMC1-203ENST00000469455 RIC3Q7Z5B4 369 aa10.42□□□□□ -0.74
TMC1-203ENST00000469455 BANK1Q8NDB2 785 aa10.42□□□□□ -0.74
TMC1-203ENST00000469455 CDK11AQ9UQ88 783 aaPredicted RBP10.42□□□□□ -0.74
TMC1-203ENST00000469455 NCOA2Q15596 1464 aa10.42□□□□□ -0.74
TMC1-203ENST00000469455 ASXL2Q76L83 1435 aa10.41□□□□□ -0.74
TMC1-203ENST00000469455 TTC37Q6PGP7 1564 aa10.41□□□□□ -0.74
TMC1-203ENST00000469455 DDX11L8A8MPP1 907 aa10.41□□□□□ -0.74
TMC1-203ENST00000469455 RFC5P40937 340 aa10.41□□□□□ -0.74
TMC1-203ENST00000469455 PPP2R2DQ66LE6 453 aa10.41□□□□□ -0.74
TMC1-203ENST00000469455 NUTM1Q86Y26 1132 aa10.41□□□□□ -0.74
TMC1-203ENST00000469455 KCNH8Q96L42 1107 aa10.41□□□□□ -0.74
TMC1-203ENST00000469455 LIMD1Q9UGP4 676 aa10.41□□□□□ -0.74
TMC1-203ENST00000469455 ABCC10Q5T3U5 1492 aa10.41□□□□□ -0.74
TMC1-203ENST00000469455 ABCA9Q8IUA7 1624 aa10.4□□□□□ -0.74
TMC1-203ENST00000469455 SPDYE5A6NIY4 337 aa10.4□□□□□ -0.74
TMC1-203ENST00000469455 SPTLC1O15269 473 aa10.4□□□□□ -0.74
TMC1-203ENST00000469455 TMEM259Q4ZIN3 620 aa10.4□□□□□ -0.74
TMC1-203ENST00000469455 MYO5CQ9NQX4 1742 aa10.4□□□□□ -0.74
TMC1-203ENST00000469455 PREX2Q70Z35 1606 aa10.4□□□□□ -0.75
TMC1-203ENST00000469455 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.39□□□□□ -0.75
TMC1-203ENST00000469455 CDC42BPBQ9Y5S2 1711 aa10.39□□□□□ -0.75
TMC1-203ENST00000469455 PLEKHD1A6NEE1 506 aa10.39□□□□□ -0.75
TMC1-203ENST00000469455 GJA5P36382 358 aa10.39□□□□□ -0.75
TMC1-203ENST00000469455 KCNK17Q96T54 332 aa10.39□□□□□ -0.75
TMC1-203ENST00000469455 KIF13AQ9H1H9 1805 aa10.38□□□□□ -0.75
TMC1-203ENST00000469455 RAD21O60216 631 aa10.38□□□□□ -0.75
TMC1-203ENST00000469455 PROX2Q3B8N5 592 aa10.38□□□□□ -0.75
TMC1-203ENST00000469455 DIP2BQ9P265 1576 aa10.38□□□□□ -0.75
TMC1-203ENST00000469455 PHLDB1Q86UU1 1377 aa10.38□□□□□ -0.75
TMC1-203ENST00000469455 RSBN1LQ6PCB5 846 aaPredicted RBP10.37□□□□□ -0.75
TMC1-203ENST00000469455 ARID3AQ99856 593 aa10.37□□□□□ -0.75
TMC1-203ENST00000469455 GLI2P10070 1586 aa10.36□□□□□ -0.75
TMC1-203ENST00000469455 MYOM3Q5VTT5 1437 aa10.36□□□□□ -0.75
TMC1-203ENST00000469455 SMAPO00193 183 aa10.36□□□□□ -0.75
TMC1-203ENST00000469455 FBXO31Q5XUX0 539 aaPredicted RBP10.36□□□□□ -0.75
TMC1-203ENST00000469455 ARAP3Q8WWN8 1544 aa10.36□□□□□ -0.75
TMC1-203ENST00000469455 RRBP1Q9P2E9 1410 aaKnown RBP10.35□□□□□ -0.75
TMC1-203ENST00000469455 GPATCH8Q9UKJ3 1502 aaKnown RBP10.35□□□□□ -0.75
TMC1-203ENST00000469455 MOXD2PA6NHM9 499 aa10.35□□□□□ -0.75
TMC1-203ENST00000469455 RSPH4AQ5TD94 716 aa10.35□□□□□ -0.75
TMC1-203ENST00000469455 PROSER2Q86WR7 435 aaPredicted RBP10.35□□□□□ -0.75
TMC1-203ENST00000469455 ZBED2Q9BTP6 218 aa10.35□□□□□ -0.75
TMC1-203ENST00000469455 KIAA1468Q9P260 1216 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms