RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 PPP2R1AP30153 589 aa11.22□□□□□ -0.61
SMARCE1-207ENST00000469334 COG6Q9Y2V7 657 aa11.22□□□□□ -0.61
SMARCE1-207ENST00000469334 GRIN2AQ12879 1464 aa11.22□□□□□ -0.61
SMARCE1-207ENST00000469334 DISP3Q9P2K9 1392 aa11.22□□□□□ -0.61
SMARCE1-207ENST00000469334 PANK3Q9H999 370 aa11.21□□□□□ -0.61
SMARCE1-207ENST00000469334 DDX49Q9Y6V7 483 aaKnown RBP11.21□□□□□ -0.61
SMARCE1-207ENST00000469334 NUP160Q12769 1436 aa11.21□□□□□ -0.62
SMARCE1-207ENST00000469334 VGFO15240 615 aaPredicted RBP11.21□□□□□ -0.62
SMARCE1-207ENST00000469334 MYO5CQ9NQX4 1742 aa11.21□□□□□ -0.62
SMARCE1-207ENST00000469334 ASXL1Q8IXJ9 1541 aa11.21□□□□□ -0.62
SMARCE1-207ENST00000469334 SHANK2Q9UPX8 1470 aa11.2□□□□□ -0.62
SMARCE1-207ENST00000469334 RAD54L2Q9Y4B4 1467 aa11.2□□□□□ -0.62
SMARCE1-207ENST00000469334 PTPRGP23470 1445 aa11.2□□□□□ -0.62
SMARCE1-207ENST00000469334 KIAA2012Q0VF49 1180 aa11.2□□□□□ -0.62
SMARCE1-207ENST00000469334 ANKRD50Q9ULJ7 1429 aa11.19□□□□□ -0.62
SMARCE1-207ENST00000469334 TOPBP1Q92547 1522 aa11.19□□□□□ -0.62
SMARCE1-207ENST00000469334 ADCY10Q96PN6 1610 aa11.19□□□□□ -0.62
SMARCE1-207ENST00000469334 TMF1P82094 1093 aa11.19□□□□□ -0.62
SMARCE1-207ENST00000469334 PANK1Q8TE04 598 aa11.19□□□□□ -0.62
SMARCE1-207ENST00000469334 YEATS2Q9ULM3 1422 aa11.19□□□□□ -0.62
SMARCE1-207ENST00000469334 TESK2Q96S53 571 aa11.18□□□□□ -0.62
SMARCE1-207ENST00000469334 CHMP4BQ9H444 224 aaKnown RBP11.18□□□□□ -0.62
SMARCE1-207ENST00000469334 PCDHB15Q9Y5E8 787 aa11.18□□□□□ -0.62
SMARCE1-207ENST00000469334 WDR7Q9Y4E6 1490 aa11.18□□□□□ -0.62
SMARCE1-207ENST00000469334 ARID3AQ99856 593 aa11.18□□□□□ -0.62
SMARCE1-207ENST00000469334 REREQ9P2R6 1566 aa11.18□□□□□ -0.62
SMARCE1-207ENST00000469334 K7ELQ4 463 aaPredicted RBP11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 BAG4O95429 457 aaKnown RBP11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 ZSCAN23Q3MJ62 389 aa11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 RSPH4AQ5TD94 716 aa11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 IQGAP2Q13576 1575 aa11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 PBRM1Q86U86 1689 aa11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 CFAP74Q9C0B2 1584 aa11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 CCDC141Q6ZP82 1450 aa11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 SLC20A2Q08357 652 aa11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 NBPF1Q3BBV0 1214 aa11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 SPINK5Q9NQ38 1064 aaPredicted RBP11.17□□□□□ -0.62
SMARCE1-207ENST00000469334 MAGI2Q86UL8 1455 aa11.16□□□□□ -0.62
SMARCE1-207ENST00000469334 ZNF710Q8N1W2 664 aa11.16□□□□□ -0.62
SMARCE1-207ENST00000469334 RBSNQ9H1K0 784 aa11.16□□□□□ -0.62
SMARCE1-207ENST00000469334 KNSTRNQ9Y448 316 aa11.16□□□□□ -0.62
SMARCE1-207ENST00000469334 FANCD2Q9BXW9 1451 aa11.16□□□□□ -0.62
SMARCE1-207ENST00000469334 KIF16BQ96L93 1317 aa11.15□□□□□ -0.62
SMARCE1-207ENST00000469334 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
SMARCE1-207ENST00000469334 CBX1P83916 185 aa11.15□□□□□ -0.62
SMARCE1-207ENST00000469334 IQGAP1P46940 1657 aa11.15□□□□□ -0.62
SMARCE1-207ENST00000469334 MYOM1P52179 1685 aa11.15□□□□□ -0.62
SMARCE1-207ENST00000469334 NUCB2P80303 420 aa11.15□□□□□ -0.62
SMARCE1-207ENST00000469334 KDM2AQ9Y2K7 1162 aa11.15□□□□□ -0.62
SMARCE1-207ENST00000469334 UHRF1BP1LA0JNW5 1464 aa11.15□□□□□ -0.63
SMARCE1-207ENST00000469334 SSFA2P28290 1259 aa11.14□□□□□ -0.63
SMARCE1-207ENST00000469334 GABPB1Q06547 395 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-207ENST00000469334 HDAC1Q13547 482 aaPredicted RBP11.14□□□□□ -0.63
SMARCE1-207ENST00000469334 FEZ1Q99689 392 aa11.14□□□□□ -0.63
SMARCE1-207ENST00000469334 KIF3AQ9Y496 699 aa11.14□□□□□ -0.63
SMARCE1-207ENST00000469334 NUP155O75694 1391 aa11.14□□□□□ -0.63
SMARCE1-207ENST00000469334 APAF1O14727 1248 aa11.14□□□□□ -0.63
SMARCE1-207ENST00000469334 RARSP54136 660 aaKnown RBP11.14□□□□□ -0.63
SMARCE1-207ENST00000469334 LRSAM1Q6UWE0 723 aa11.14□□□□□ -0.63
SMARCE1-207ENST00000469334 CDC42BPAQ5VT25 1732 aa11.14□□□□□ -0.63
SMARCE1-207ENST00000469334 KANK1Q14678 1352 aa11.13□□□□□ -0.63
SMARCE1-207ENST00000469334 AMER1Q5JTC6 1135 aaPredicted RBP11.13□□□□□ -0.63
SMARCE1-207ENST00000469334 CAVIN1Q6NZI2 390 aaKnown RBP11.13□□□□□ -0.63
SMARCE1-207ENST00000469334 ATP2B3Q16720 1220 aa11.12□□□□□ -0.63
SMARCE1-207ENST00000469334 PIBF1Q8WXW3 757 aa11.12□□□□□ -0.63
SMARCE1-207ENST00000469334 AK9Q5TCS8 1911 aa11.12□□□□□ -0.63
SMARCE1-207ENST00000469334 MVPQ14764 893 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-207ENST00000469334 DNTTIP2Q5QJE6 756 aaKnown RBP11.12□□□□□ -0.63
SMARCE1-207ENST00000469334 PDCL2Q8N4E4 241 aa11.12□□□□□ -0.63
SMARCE1-207ENST00000469334 LMBRD1Q9NUN5 540 aa11.12□□□□□ -0.63
SMARCE1-207ENST00000469334 A2MP01023 1474 aa11.11□□□□□ -0.63
SMARCE1-207ENST00000469334 ZNF644Q9H582 1327 aaPredicted RBP11.11□□□□□ -0.63
SMARCE1-207ENST00000469334 CCDC66A2RUB6 948 aa11.11□□□□□ -0.63
SMARCE1-207ENST00000469334 PRIM1P49642 420 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-207ENST00000469334 RAPGEF6Q8TEU7 1601 aa11.11□□□□□ -0.63
SMARCE1-207ENST00000469334 SYNJ2O15056 1496 aa11.11□□□□□ -0.63
SMARCE1-207ENST00000469334 CDCA8Q53HL2 280 aa11.11□□□□□ -0.63
SMARCE1-207ENST00000469334 FTSJ3Q8IY81 847 aaKnown RBP11.11□□□□□ -0.63
SMARCE1-207ENST00000469334 CYP2E1P05181 493 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-207ENST00000469334 PTMAP06454 111 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-207ENST00000469334 CCDC146Q8IYE0 955 aa11.1□□□□□ -0.63
SMARCE1-207ENST00000469334 ZNF830Q96NB3 372 aaPredicted RBP11.1□□□□□ -0.63
SMARCE1-207ENST00000469334 DNAJC2Q99543 621 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-207ENST00000469334 IQSEC2Q5JU85 1478 aa11.1□□□□□ -0.63
SMARCE1-207ENST00000469334 KDM5AP29375 1690 aaKnown RBP11.1□□□□□ -0.63
SMARCE1-207ENST00000469334 RLBP1P12271 317 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 MCTP1Q6DN14 999 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 WWC1Q8IX03 1113 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 ANKRD7Q92527 254 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 KIF2CQ99661 725 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 DIAPH3Q9NSV4 1193 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 SPTLC3Q9NUV7 552 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 OGFRQ9NZT2 677 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 SHPRHQ149N8 1683 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 MBD3O95983 291 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 FAM193AP78312 1265 aa11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 FKBP5Q13451 457 aaPredicted RBP11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 NCBP3Q53F19 620 aaKnown RBP11.09□□□□□ -0.63
SMARCE1-207ENST00000469334 ZNF771Q7L3S4 317 aaPredicted RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms