RNA–Protein interactions for RNA: ENST00000469142.1

DMD-218, Transcript of dystrophin, humanhuman

TSL 4

Gene DMD, Length 555 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DMD-218ENST00000469142 PTCH1Q13635 1447 aa12.68□□□□□ -0.38
DMD-218ENST00000469142 NPHP3Q7Z494 1330 aa12.67□□□□□ -0.38
DMD-218ENST00000469142 BCL9LQ86UU0 1499 aa12.67□□□□□ -0.38
DMD-218ENST00000469142 DEFB132Q7Z7B7 95 aa12.67□□□□□ -0.38
DMD-218ENST00000469142 RPGRIP1LQ68CZ1 1315 aa12.66□□□□□ -0.38
DMD-218ENST00000469142 NEXMIFQ5QGS0 1516 aa12.66□□□□□ -0.38
DMD-218ENST00000469142 RGL3Q3MIN7 710 aa12.65□□□□□ -0.38
DMD-218ENST00000469142 TMEM132EQ6IEE7 984 aa12.65□□□□□ -0.38
DMD-218ENST00000469142 UNC5CLQ8IV45 518 aa12.65□□□□□ -0.38
DMD-218ENST00000469142 SLC4A1APQ9BWU0 796 aaKnown RBP12.64□□□□□ -0.39
DMD-218ENST00000469142 ADGRF5Q8IZF2 1346 aa12.63□□□□□ -0.39
DMD-218ENST00000469142 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
DMD-218ENST00000469142 CABLES1Q8TDN4 633 aa12.63□□□□□ -0.39
DMD-218ENST00000469142 HFM1A2PYH4 1435 aa12.62□□□□□ -0.39
DMD-218ENST00000469142 CLTCL1P53675 1640 aa12.62□□□□□ -0.39
DMD-218ENST00000469142 NALCNQ8IZF0 1738 aa12.62□□□□□ -0.39
DMD-218ENST00000469142 MYOM2P54296 1465 aa12.62□□□□□ -0.39
DMD-218ENST00000469142 SEPT12Q8IYM1 358 aa12.62□□□□□ -0.39
DMD-218ENST00000469142 CCDC9Q9Y3X0 531 aaKnown RBP12.61□□□□□ -0.39
DMD-218ENST00000469142 SPATA31A3Q5VYP0 1347 aa12.61□□□□□ -0.39
DMD-218ENST00000469142 LRPPRCP42704 1394 aaKnown RBP12.6□□□□□ -0.39
DMD-218ENST00000469142 HAP1P54257 671 aaPredicted RBP12.6□□□□□ -0.39
DMD-218ENST00000469142 SF3B2Q13435 895 aaKnown RBP12.6□□□□□ -0.39
DMD-218ENST00000469142 SPHKAPQ2M3C7 1700 aa12.59□□□□□ -0.39
DMD-218ENST00000469142 PXDNQ92626 1479 aa12.59□□□□□ -0.39
DMD-218ENST00000469142 PLEKHH1Q9ULM0 1364 aa12.59□□□□□ -0.39
DMD-218ENST00000469142 LMOD2Q6P5Q4 547 aa12.59□□□□□ -0.39
DMD-218ENST00000469142 NAIPQ13075 1403 aa12.59□□□□□ -0.39
DMD-218ENST00000469142 RALGAPBQ86X10 1494 aa12.58□□□□□ -0.4
DMD-218ENST00000469142 EP400Q96L91 3159 aa12.57□□□□□ -0.4
DMD-218ENST00000469142 BLMP54132 1417 aaPredicted RBP12.57□□□□□ -0.4
DMD-218ENST00000469142 PSDA5PKW4 1024 aaPredicted RBP12.57□□□□□ -0.4
DMD-218ENST00000469142 FAM83GA6ND36 823 aa12.57□□□□□ -0.4
DMD-218ENST00000469142 ONECUT3O60422 494 aaPredicted RBP12.57□□□□□ -0.4
DMD-218ENST00000469142 VPS72Q15906 364 aa12.57□□□□□ -0.4
DMD-218ENST00000469142 LAMC1P11047 1609 aa12.57□□□□□ -0.4
DMD-218ENST00000469142 PSME1Q06323 249 aa12.56□□□□□ -0.4
DMD-218ENST00000469142 KRT27Q7Z3Y8 459 aa12.56□□□□□ -0.4
DMD-218ENST00000469142 PHF8Q9UPP1 1060 aa12.56□□□□□ -0.4
DMD-218ENST00000469142 PRAG1Q86YV5 1406 aa12.55□□□□□ -0.4
DMD-218ENST00000469142 A0A0G2JS52 829 aa12.55□□□□□ -0.4
DMD-218ENST00000469142 MYT1Q01538 1121 aa12.55□□□□□ -0.4
DMD-218ENST00000469142 SAFB2Q14151 953 aaKnown RBP eCLIP12.55□□□□□ -0.4
DMD-218ENST00000469142 SLIT2O94813 1529 aa12.55□□□□□ -0.4
DMD-218ENST00000469142 ABCC11Q96J66 1382 aa12.55□□□□□ -0.4
DMD-218ENST00000469142 FAM182BQ5T319 152 aa12.54□□□□□ -0.4
DMD-218ENST00000469142 COL22A1Q8NFW1 1626 aaPredicted RBP12.54□□□□□ -0.4
DMD-218ENST00000469142 FAM98CQ17RN3 349 aaKnown RBP12.53□□□□□ -0.4
DMD-218ENST00000469142 PMFBP1Q8TBY8 1022 aa12.53□□□□□ -0.4
DMD-218ENST00000469142 CFAP70Q5T0N1 1121 aa12.52□□□□□ -0.41
DMD-218ENST00000469142 GLI3P10071 1580 aa12.52□□□□□ -0.41
DMD-218ENST00000469142 HRCP23327 699 aa12.51□□□□□ -0.41
DMD-218ENST00000469142 EN1Q05925 392 aaPredicted RBP12.51□□□□□ -0.41
DMD-218ENST00000469142 SIRT1Q96EB6 747 aa12.51□□□□□ -0.41
DMD-218ENST00000469142 MPHOSPH9Q99550 1183 aa12.51□□□□□ -0.41
DMD-218ENST00000469142 RRBP1Q9P2E9 1410 aaKnown RBP12.51□□□□□ -0.41
DMD-218ENST00000469142 BAG6P46379 1132 aa12.5□□□□□ -0.41
DMD-218ENST00000469142 PRAM1Q96QH2 718 aa12.5□□□□□ -0.41
DMD-218ENST00000469142 C14orf93Q9H972 538 aaKnown RBP12.5□□□□□ -0.41
DMD-218ENST00000469142 BTG4Q9NY30 223 aa12.5□□□□□ -0.41
DMD-218ENST00000469142 CDC42BPGQ6DT37 1551 aa12.5□□□□□ -0.41
DMD-218ENST00000469142 KIF1BO60333 1816 aa12.5□□□□□ -0.41
DMD-218ENST00000469142 CCDC144AA2RUR9 1427 aa12.49□□□□□ -0.41
DMD-218ENST00000469142 TECPR2O15040 1411 aa12.49□□□□□ -0.41
DMD-218ENST00000469142 ANKRD30BQ9BXX2 1392 aa12.49□□□□□ -0.41
DMD-218ENST00000469142 YTHDC2Q9H6S0 1430 aaKnown RBP12.48□□□□□ -0.41
DMD-218ENST00000469142 R3HDM1Q15032 1099 aaKnown RBP12.48□□□□□ -0.41
DMD-218ENST00000469142 PELP1Q8IZL8 1130 aaKnown RBP12.48□□□□□ -0.41
DMD-218ENST00000469142 POGKQ9P215 609 aa12.48□□□□□ -0.41
DMD-218ENST00000469142 SPATA31E1Q6ZUB1 1445 aa12.47□□□□□ -0.41
DMD-218ENST00000469142 HIRIP3Q9BW71 556 aaPredicted RBP12.47□□□□□ -0.41
DMD-218ENST00000469142 TNS3Q68CZ2 1445 aa12.46□□□□□ -0.41
DMD-218ENST00000469142 SBNO1A3KN83 1393 aa12.46□□□□□ -0.41
DMD-218ENST00000469142 DHX57Q6P158 1386 aaKnown RBP12.45□□□□□ -0.42
DMD-218ENST00000469142 EZH2Q15910 746 aaKnown RBP12.45□□□□□ -0.42
DMD-218ENST00000469142 ARHGEF10O15013 1369 aa12.44□□□□□ -0.42
DMD-218ENST00000469142 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
DMD-218ENST00000469142 TRAK1Q9UPV9 953 aa12.44□□□□□ -0.42
DMD-218ENST00000469142 PIK3C2GO75747 1445 aa12.44□□□□□ -0.42
DMD-218ENST00000469142 PPLO60437 1756 aa12.43□□□□□ -0.42
DMD-218ENST00000469142 SPATA31A5Q5VU36 1347 aa12.42□□□□□ -0.42
DMD-218ENST00000469142 SPATA31A7Q8IWB4 1347 aa12.42□□□□□ -0.42
DMD-218ENST00000469142 MINK1Q8N4C8 1332 aaPredicted RBP12.42□□□□□ -0.42
DMD-218ENST00000469142 USP32Q8NFA0 1604 aa12.42□□□□□ -0.42
DMD-218ENST00000469142 TRIM37O94972 964 aa12.42□□□□□ -0.42
DMD-218ENST00000469142 NRXN1Q9ULB1 1477 aa12.41□□□□□ -0.42
DMD-218ENST00000469142 CHRNA2Q15822 529 aa12.41□□□□□ -0.42
DMD-218ENST00000469142 NGDNQ8NEJ9 315 aaKnown RBP12.41□□□□□ -0.42
DMD-218ENST00000469142 STRN4Q9NRL3 753 aa12.41□□□□□ -0.42
DMD-218ENST00000469142 MARF1Q9Y4F3 1742 aaKnown RBP12.41□□□□□ -0.42
DMD-218ENST00000469142 BRWD3Q6RI45 1802 aa12.41□□□□□ -0.42
DMD-218ENST00000469142 PRR36Q9H6K5 1346 aa12.4□□□□□ -0.42
DMD-218ENST00000469142 ACIN1Q9UKV3 1341 aaKnown RBP12.4□□□□□ -0.42
DMD-218ENST00000469142 APBA3O96018 575 aa12.4□□□□□ -0.42
DMD-218ENST00000469142 CAMKK2Q96RR4 588 aa12.4□□□□□ -0.42
DMD-218ENST00000469142 PRDM11Q9NQV5 511 aa12.4□□□□□ -0.42
DMD-218ENST00000469142 USP35Q9P2H5 1018 aa12.4□□□□□ -0.42
DMD-218ENST00000469142 KDM2AQ9Y2K7 1162 aa12.4□□□□□ -0.42
DMD-218ENST00000469142 GPRASP1Q5JY77 1395 aa12.4□□□□□ -0.42
DMD-218ENST00000469142 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.4□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms