RNA–Protein interactions for RNA: ENST00000469140.2

MTA1-209, Transcript of metastasis associated 1, humanhuman

TSL 5

Gene MTA1, Length 1,666 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTA1-209ENST00000469140 PTCH1Q13635 1447 aa32.52■■■□□ 2.8
MTA1-209ENST00000469140 TULP4Q9NRJ4 1543 aa32.52■■■□□ 2.8
MTA1-209ENST00000469140 HSPA2P54652 639 aa32.52■■■□□ 2.8
MTA1-209ENST00000469140 MIER1Q8N108 512 aa32.52■■■□□ 2.8
MTA1-209ENST00000469140 XRN1Q8IZH2 1706 aaKnown RBP32.49■■■□□ 2.79
MTA1-209ENST00000469140 ANP32CO43423 234 aa32.47■■■□□ 2.79
MTA1-209ENST00000469140 CHD2O14647 1828 aaKnown RBP32.44■■■□□ 2.78
MTA1-209ENST00000469140 KCNA6P17658 529 aa32.43■■■□□ 2.78
MTA1-209ENST00000469140 SRPK2P78362 688 aaKnown RBP32.42■■■□□ 2.78
MTA1-209ENST00000469140 CDK19Q9BWU1 502 aa32.42■■■□□ 2.78
MTA1-209ENST00000469140 PANK3Q9H999 370 aa32.42■■■□□ 2.78
MTA1-209ENST00000469140 CABP2Q9NPB3 220 aa32.41■■■□□ 2.78
MTA1-209ENST00000469140 MYOM1P52179 1685 aa32.41■■■□□ 2.78
MTA1-209ENST00000469140 ATAD2Q6PL18 1390 aa32.4■■■□□ 2.78
MTA1-209ENST00000469140 WASLO00401 505 aaPredicted RBP32.39■■■□□ 2.78
MTA1-209ENST00000469140 PER1O15534 1290 aaPredicted RBP32.37■■■□□ 2.77
MTA1-209ENST00000469140 ADGRB2O60241 1585 aa32.36■■■□□ 2.77
MTA1-209ENST00000469140 NINLQ9Y2I6 1382 aa32.36■■■□□ 2.77
MTA1-209ENST00000469140 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.35■■■□□ 2.77
MTA1-209ENST00000469140 NWD1Q149M9 1564 aa32.34■■■□□ 2.77
MTA1-209ENST00000469140 TMC1Q8TDI8 760 aa32.34■■■□□ 2.77
MTA1-209ENST00000469140 STRCQ7RTU9 1775 aa32.33■■■□□ 2.77
MTA1-209ENST00000469140 SLC12A5Q9H2X9 1139 aa32.31■■■□□ 2.76
MTA1-209ENST00000469140 PRKRIP1Q9H875 184 aaPredicted RBP32.29■■■□□ 2.76
MTA1-209ENST00000469140 KNSTRNQ9Y448 316 aa32.27■■■□□ 2.76
MTA1-209ENST00000469140 NKTRP30414 1462 aaKnown RBP32.25■■■□□ 2.75
MTA1-209ENST00000469140 ANKRD36BQ8N2N9 1353 aa32.24■■■□□ 2.75
MTA1-209ENST00000469140 NUDT16Q96DE0 195 aaKnown RBP32.23■■■□□ 2.75
MTA1-209ENST00000469140 KTN1Q86UP2 1357 aaKnown RBP32.23■■■□□ 2.75
MTA1-209ENST00000469140 CCER2I3L3R5 266 aa32.22■■■□□ 2.75
MTA1-209ENST00000469140 CCDC61Q9Y6R9 512 aa32.21■■■□□ 2.75
MTA1-209ENST00000469140 CARD14Q9BXL6 1004 aa32.21■■■□□ 2.75
MTA1-209ENST00000469140 TERF2IPQ9NYB0 399 aa32.21■■■□□ 2.75
MTA1-209ENST00000469140 DMRT2Q9Y5R5 561 aa32.21■■■□□ 2.75
MTA1-209ENST00000469140 CABP1Q9NZU7 370 aa32.2■■■□□ 2.74
MTA1-209ENST00000469140 PROSER2Q86WR7 435 aaPredicted RBP32.19■■■□□ 2.74
MTA1-209ENST00000469140 ATP7BP35670 1465 aa32.18■■■□□ 2.74
MTA1-209ENST00000469140 NPC1L1Q9UHC9 1359 aa32.18■■■□□ 2.74
MTA1-209ENST00000469140 RALBP1Q15311 655 aa32.18■■■□□ 2.74
MTA1-209ENST00000469140 ADGRL3Q9HAR2 1447 aa32.17■■■□□ 2.74
MTA1-209ENST00000469140 AMER1Q5JTC6 1135 aaPredicted RBP32.17■■■□□ 2.74
MTA1-209ENST00000469140 PPIP5K1Q6PFW1 1433 aa32.16■■■□□ 2.74
MTA1-209ENST00000469140 PRR36Q9H6K5 1346 aa32.16■■■□□ 2.74
MTA1-209ENST00000469140 HDGFL2Q7Z4V5 671 aaPredicted RBP32.15■■■□□ 2.74
MTA1-209ENST00000469140 A0A1W2PP64 1363 aa32.14■■■□□ 2.74
MTA1-209ENST00000469140 CDC42BPGQ6DT37 1551 aa32.14■■■□□ 2.74
MTA1-209ENST00000469140 CD163L1Q9NR16 1453 aa32.14■■■□□ 2.73
MTA1-209ENST00000469140 NSD3Q9BZ95 1437 aa32.13■■■□□ 2.73
MTA1-209ENST00000469140 NALCNQ8IZF0 1738 aa32.13■■■□□ 2.73
MTA1-209ENST00000469140 NCOA3Q9Y6Q9 1424 aa32.13■■■□□ 2.73
MTA1-209ENST00000469140 PARD3Q8TEW0 1356 aa32.12■■■□□ 2.73
MTA1-209ENST00000469140 CNGB1Q14028 1251 aaPredicted RBP32.12■■■□□ 2.73
MTA1-209ENST00000469140 ANKARQ7Z5J8 1434 aa32.12■■■□□ 2.73
MTA1-209ENST00000469140 CC2D1BQ5T0F9 858 aaKnown RBP32.11■■■□□ 2.73
MTA1-209ENST00000469140 RBM33Q96EV2 1170 aaKnown RBP32.11■■■□□ 2.73
MTA1-209ENST00000469140 C14orf37Q86TY3 774 aa32.11■■■□□ 2.73
MTA1-209ENST00000469140 STRCP1A6NGW2 1772 aa32.1■■■□□ 2.73
MTA1-209ENST00000469140 PLEKHG3A1L390 1219 aa32.08■■■□□ 2.73
MTA1-209ENST00000469140 USP32Q8NFA0 1604 aa32.08■■■□□ 2.73
MTA1-209ENST00000469140 TOPAZ1Q8N9V7 1692 aa32.08■■■□□ 2.73
MTA1-209ENST00000469140 FMN2Q9NZ56 1722 aa32.08■■■□□ 2.73
MTA1-209ENST00000469140 CGNL1Q0VF96 1302 aa32.07■■■□□ 2.73
MTA1-209ENST00000469140 CPSF1Q10570 1443 aaKnown RBP32.07■■■□□ 2.72
MTA1-209ENST00000469140 NUTM2FA1L443 756 aa32.07■■■□□ 2.72
MTA1-209ENST00000469140 ZNF692Q9BU19 519 aaPredicted RBP32.05■■■□□ 2.72
MTA1-209ENST00000469140 TMEM94Q12767 1356 aa32.05■■■□□ 2.72
MTA1-209ENST00000469140 C19orf44Q9H6X5 657 aa32.05■■■□□ 2.72
MTA1-209ENST00000469140 MYBBP1AQ9BQG0 1328 aaKnown RBP32.05■■■□□ 2.72
MTA1-209ENST00000469140 ITSN1Q15811 1721 aa32.03■■■□□ 2.72
MTA1-209ENST00000469140 NSD2O96028 1365 aa32.02■■■□□ 2.72
MTA1-209ENST00000469140 ZNF335Q9H4Z2 1342 aaPredicted RBP32.02■■■□□ 2.72
MTA1-209ENST00000469140 ACEP12821 1306 aa31.98■■■□□ 2.71
MTA1-209ENST00000469140 DCCP43146 1447 aa31.98■■■□□ 2.71
MTA1-209ENST00000469140 EDC4Q6P2E9 1401 aaKnown RBP31.98■■■□□ 2.71
MTA1-209ENST00000469140 AKAP12Q02952 1782 aa31.95■■■□□ 2.71
MTA1-209ENST00000469140 POLR3AO14802 1390 aaPredicted RBP31.95■■■□□ 2.71
MTA1-209ENST00000469140 NLRP13Q86W25 1043 aa31.95■■■□□ 2.7
MTA1-209ENST00000469140 LRRC7Q96NW7 1537 aa31.94■■■□□ 2.7
MTA1-209ENST00000469140 MRS2Q9HD23 443 aa31.94■■■□□ 2.7
MTA1-209ENST00000469140 RGPD8O14715 1765 aaPredicted RBP31.94■■■□□ 2.7
MTA1-209ENST00000469140 MON2Q7Z3U7 1717 aa31.93■■■□□ 2.7
MTA1-209ENST00000469140 BRD4O60885 1362 aaPredicted RBP31.92■■■□□ 2.7
MTA1-209ENST00000469140 ATF3P18847 181 aa31.92■■■□□ 2.7
MTA1-209ENST00000469140 PMFBP1Q8TBY8 1022 aa31.92■■■□□ 2.7
MTA1-209ENST00000469140 FYB1O15117 783 aa31.92■■■□□ 2.7
MTA1-209ENST00000469140 CCDC184Q52MB2 194 aa31.92■■■□□ 2.7
MTA1-209ENST00000469140 MORC1Q86VD1 984 aa31.92■■■□□ 2.7
MTA1-209ENST00000469140 NGDNQ8NEJ9 315 aaKnown RBP31.92■■■□□ 2.7
MTA1-209ENST00000469140 MSH6P52701 1360 aa31.91■■■□□ 2.7
MTA1-209ENST00000469140 USP6P35125 1406 aa31.89■■■□□ 2.7
MTA1-209ENST00000469140 CADPS2Q86UW7 1296 aa31.89■■■□□ 2.7
MTA1-209ENST00000469140 PHF8Q9UPP1 1060 aa31.89■■■□□ 2.7
MTA1-209ENST00000469140 PPP2R1AP30153 589 aa31.89■■■□□ 2.7
MTA1-209ENST00000469140 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.88■■■□□ 2.69
MTA1-209ENST00000469140 ESCO1Q5FWF5 840 aa31.86■■■□□ 2.69
MTA1-209ENST00000469140 GGNBP2Q9H3C7 697 aa31.86■■■□□ 2.69
MTA1-209ENST00000469140 XIRP1Q702N8 1843 aaKnown RBP31.85■■■□□ 2.69
MTA1-209ENST00000469140 AEBP2Q6ZN18 517 aaPredicted RBP31.85■■■□□ 2.69
MTA1-209ENST00000469140 C1orf167Q5SNV9 1468 aa31.85■■■□□ 2.69
MTA1-209ENST00000469140 TTC21BQ7Z4L5 1316 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms