RNA–Protein interactions for RNA: ENST00000468864.1

TRAPPC10-207, Transcript of trafficking protein particle complex 10, humanhuman

TSL 2

Gene TRAPPC10, Length 3,909 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-207ENST00000468864 WWC1Q8IX03 1113 aa12.92□□□□□ -0.34
TRAPPC10-207ENST00000468864 CCAR2Q8N163 923 aaKnown RBP12.92□□□□□ -0.34
TRAPPC10-207ENST00000468864 IFT57Q9NWB7 429 aa12.92□□□□□ -0.34
TRAPPC10-207ENST00000468864 ANKRD30BQ9BXX2 1392 aa12.91□□□□□ -0.34
TRAPPC10-207ENST00000468864 MVPQ14764 893 aaKnown RBP12.91□□□□□ -0.34
TRAPPC10-207ENST00000468864 LMOD3Q0VAK6 560 aa12.91□□□□□ -0.34
TRAPPC10-207ENST00000468864 KIAA1107Q9UPP5 1409 aa12.91□□□□□ -0.34
TRAPPC10-207ENST00000468864 K7ELQ4 463 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC10-207ENST00000468864 API5Q9BZZ5 524 aaKnown RBP12.91□□□□□ -0.34
TRAPPC10-207ENST00000468864 CCDC39Q9UFE4 941 aa12.91□□□□□ -0.34
TRAPPC10-207ENST00000468864 EVC2Q86UK5 1308 aa12.9□□□□□ -0.34
TRAPPC10-207ENST00000468864 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.34
TRAPPC10-207ENST00000468864 MAP7D2Q96T17 732 aa12.9□□□□□ -0.34
TRAPPC10-207ENST00000468864 TOPBP1Q92547 1522 aa12.9□□□□□ -0.34
TRAPPC10-207ENST00000468864 SPC24Q8NBT2 197 aa12.9□□□□□ -0.34
TRAPPC10-207ENST00000468864 ATP6V1DQ9Y5K8 247 aa12.9□□□□□ -0.34
TRAPPC10-207ENST00000468864 HTATSF1O43719 755 aaKnown RBP12.9□□□□□ -0.34
TRAPPC10-207ENST00000468864 ZSCAN30Q86W11 494 aa12.9□□□□□ -0.34
TRAPPC10-207ENST00000468864 NPHP1O15259 732 aa12.89□□□□□ -0.35
TRAPPC10-207ENST00000468864 AAMPQ13685 434 aa12.89□□□□□ -0.35
TRAPPC10-207ENST00000468864 SF3A1Q15459 793 aaKnown RBP12.89□□□□□ -0.35
TRAPPC10-207ENST00000468864 ATF7IPQ6VMQ6 1270 aa12.89□□□□□ -0.35
TRAPPC10-207ENST00000468864 ARHGEF11O15085 1522 aa12.89□□□□□ -0.35
TRAPPC10-207ENST00000468864 FIBPO43427 364 aa12.89□□□□□ -0.35
TRAPPC10-207ENST00000468864 C8orf34Q49A92 452 aa12.89□□□□□ -0.35
TRAPPC10-207ENST00000468864 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.89□□□□□ -0.35
TRAPPC10-207ENST00000468864 ERCC6Q03468 1493 aa12.89□□□□□ -0.35
TRAPPC10-207ENST00000468864 SEC24BO95487 1268 aa12.88□□□□□ -0.35
TRAPPC10-207ENST00000468864 BICD2Q8TD16 824 aa12.88□□□□□ -0.35
TRAPPC10-207ENST00000468864 SMC3Q9UQE7 1217 aa12.88□□□□□ -0.35
TRAPPC10-207ENST00000468864 AQRO60306 1485 aaKnown RBP eCLIP12.88□□□□□ -0.35
TRAPPC10-207ENST00000468864 PDE4CQ08493 712 aa12.88□□□□□ -0.35
TRAPPC10-207ENST00000468864 H3BQV1 296 aa12.88□□□□□ -0.35
TRAPPC10-207ENST00000468864 FOSBP53539 338 aa12.88□□□□□ -0.35
TRAPPC10-207ENST00000468864 IFFO2Q5TF58 517 aa12.88□□□□□ -0.35
TRAPPC10-207ENST00000468864 CREBRFQ8IUR6 639 aa12.88□□□□□ -0.35
TRAPPC10-207ENST00000468864 TNPO1Q92973 898 aaKnown RBP12.88□□□□□ -0.35
TRAPPC10-207ENST00000468864 SSFA2P28290 1259 aa12.87□□□□□ -0.35
TRAPPC10-207ENST00000468864 DIAPH3Q9NSV4 1193 aa12.87□□□□□ -0.35
TRAPPC10-207ENST00000468864 EFCAB5A4FU69 1503 aa12.87□□□□□ -0.35
TRAPPC10-207ENST00000468864 RARSP54136 660 aaKnown RBP12.87□□□□□ -0.35
TRAPPC10-207ENST00000468864 CHD1LQ86WJ1 897 aa12.87□□□□□ -0.35
TRAPPC10-207ENST00000468864 TMEM57Q8N5G2 664 aa12.87□□□□□ -0.35
TRAPPC10-207ENST00000468864 GAPVD1Q14C86 1478 aa12.87□□□□□ -0.35
TRAPPC10-207ENST00000468864 SYCE3A1L190 88 aa12.86□□□□□ -0.35
TRAPPC10-207ENST00000468864 EIF2S2P20042 333 aaKnown RBP12.86□□□□□ -0.35
TRAPPC10-207ENST00000468864 FKBP5Q13451 457 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC10-207ENST00000468864 ZNF330Q9Y3S2 320 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC10-207ENST00000468864 RABEP1Q15276 862 aa12.86□□□□□ -0.35
TRAPPC10-207ENST00000468864 PRKAR2BP31323 418 aa12.86□□□□□ -0.35
TRAPPC10-207ENST00000468864 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
TRAPPC10-207ENST00000468864 ISY1Q9ULR0 285 aaKnown RBP12.86□□□□□ -0.35
TRAPPC10-207ENST00000468864 FAM184AQ8NB25 1140 aa12.85□□□□□ -0.35
TRAPPC10-207ENST00000468864 RRAGDQ9NQL2 400 aaPredicted RBP12.85□□□□□ -0.35
TRAPPC10-207ENST00000468864 AMPHP49418 695 aa12.85□□□□□ -0.35
TRAPPC10-207ENST00000468864 TSPY26PQ9H489 355 aa12.85□□□□□ -0.35
TRAPPC10-207ENST00000468864 MBD3O95983 291 aa12.85□□□□□ -0.35
TRAPPC10-207ENST00000468864 AFAP1Q8N556 730 aa12.85□□□□□ -0.35
TRAPPC10-207ENST00000468864 PTPRKQ15262 1439 aa12.84□□□□□ -0.35
TRAPPC10-207ENST00000468864 GNAI1P63096 354 aa12.84□□□□□ -0.35
TRAPPC10-207ENST00000468864 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.84□□□□□ -0.35
TRAPPC10-207ENST00000468864 MTERF4Q7Z6M4 381 aaKnown RBP12.84□□□□□ -0.35
TRAPPC10-207ENST00000468864 GPATCH3Q96I76 525 aa12.84□□□□□ -0.35
TRAPPC10-207ENST00000468864 PCDHB15Q9Y5E8 787 aa12.84□□□□□ -0.35
TRAPPC10-207ENST00000468864 HOMER1Q86YM7 354 aa12.83□□□□□ -0.35
TRAPPC10-207ENST00000468864 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.35
TRAPPC10-207ENST00000468864 THUMPD2Q9BTF0 503 aaKnown RBP12.83□□□□□ -0.35
TRAPPC10-207ENST00000468864 MRC2Q9UBG0 1479 aa12.83□□□□□ -0.36
TRAPPC10-207ENST00000468864 SSH1Q8WYL5 1049 aa12.83□□□□□ -0.36
TRAPPC10-207ENST00000468864 COG3Q96JB2 828 aa12.83□□□□□ -0.36
TRAPPC10-207ENST00000468864 TPM4P67936 248 aa12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 TRIM5Q9C035 493 aa12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 TNNQ9UQP3 1299 aa12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 PRG4Q92954 1404 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 ERBINQ96RT1 1412 aa12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 ZKSCAN1P17029 563 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 ZHX1Q9UKY1 873 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 SNAPC4Q5SXM2 1469 aa12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 VGFO15240 615 aaPredicted RBP12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 CLCN1P35523 988 aa12.82□□□□□ -0.36
TRAPPC10-207ENST00000468864 CBX1P83916 185 aa12.81□□□□□ -0.36
TRAPPC10-207ENST00000468864 TWISTNBQ3B726 338 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC10-207ENST00000468864 WDR63Q8IWG1 891 aa12.81□□□□□ -0.36
TRAPPC10-207ENST00000468864 PCF11O94913 1555 aaKnown RBP12.81□□□□□ -0.36
TRAPPC10-207ENST00000468864 SASS6Q6UVJ0 657 aa12.81□□□□□ -0.36
TRAPPC10-207ENST00000468864 ZNF428Q96B54 188 aa12.81□□□□□ -0.36
TRAPPC10-207ENST00000468864 GCC1Q96CN9 775 aa12.81□□□□□ -0.36
TRAPPC10-207ENST00000468864 UPF3BQ9BZI7 483 aaKnown RBP12.81□□□□□ -0.36
TRAPPC10-207ENST00000468864 POLA1P09884 1462 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC10-207ENST00000468864 HMGN5P82970 282 aaKnown RBP12.8□□□□□ -0.36
TRAPPC10-207ENST00000468864 NGDNQ8NEJ9 315 aaKnown RBP12.8□□□□□ -0.36
TRAPPC10-207ENST00000468864 GORABQ5T7V8 394 aa12.8□□□□□ -0.36
TRAPPC10-207ENST00000468864 PDCL3Q9H2J4 239 aa12.8□□□□□ -0.36
TRAPPC10-207ENST00000468864 LRPPRCP42704 1394 aaKnown RBP12.8□□□□□ -0.36
TRAPPC10-207ENST00000468864 PTPRGP23470 1445 aa12.8□□□□□ -0.36
TRAPPC10-207ENST00000468864 DAPK1P53355 1430 aa12.8□□□□□ -0.36
TRAPPC10-207ENST00000468864 GDPD2Q9HCC8 539 aa12.8□□□□□ -0.36
TRAPPC10-207ENST00000468864 TPD52L1Q16890 204 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC10-207ENST00000468864 FMNL2Q96PY5 1086 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms