RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 SALL2Q9Y467 1007 aaPredicted RBP8.99□□□□□ -0.97
GPNMB-207ENST00000468723 C6orf229H3BNL8 230 aa8.98□□□□□ -0.97
GPNMB-207ENST00000468723 DIXDC1Q155Q3 683 aa8.98□□□□□ -0.97
GPNMB-207ENST00000468723 CSPP1Q1MSJ5 1256 aa8.98□□□□□ -0.97
GPNMB-207ENST00000468723 RIC3Q7Z5B4 369 aa8.98□□□□□ -0.97
GPNMB-207ENST00000468723 POLR3EQ9NVU0 708 aa8.98□□□□□ -0.97
GPNMB-207ENST00000468723 MYSM1Q5VVJ2 828 aa8.97□□□□□ -0.97
GPNMB-207ENST00000468723 RSBN1LQ6PCB5 846 aaPredicted RBP8.97□□□□□ -0.97
GPNMB-207ENST00000468723 USB1Q9BQ65 265 aaKnown RBP8.97□□□□□ -0.97
GPNMB-207ENST00000468723 PCDHB15Q9Y5E8 787 aa8.97□□□□□ -0.97
GPNMB-207ENST00000468723 LIMD1Q9UGP4 676 aa8.96□□□□□ -0.98
GPNMB-207ENST00000468723 PLEKHG3A1L390 1219 aa8.95□□□□□ -0.98
GPNMB-207ENST00000468723 SPTLC1O15269 473 aa8.95□□□□□ -0.98
GPNMB-207ENST00000468723 IL27Q8NEV9 243 aa8.95□□□□□ -0.98
GPNMB-207ENST00000468723 DDRGK1Q96HY6 314 aa8.95□□□□□ -0.98
GPNMB-207ENST00000468723 MSS51Q4VC12 460 aa8.94□□□□□ -0.98
GPNMB-207ENST00000468723 PRKD2Q9BZL6 878 aa8.94□□□□□ -0.98
GPNMB-207ENST00000468723 ATP1B4Q9UN42 357 aaPredicted RBP8.94□□□□□ -0.98
GPNMB-207ENST00000468723 ANKLE1Q8NAG6 615 aa8.93□□□□□ -0.98
GPNMB-207ENST00000468723 CABLES1Q8TDN4 633 aa8.93□□□□□ -0.98
GPNMB-207ENST00000468723 RSPH6AQ9H0K4 717 aa8.93□□□□□ -0.98
GPNMB-207ENST00000468723 RGS20O76081 388 aa8.92□□□□□ -0.98
GPNMB-207ENST00000468723 MTMR2Q13614 643 aa8.92□□□□□ -0.98
GPNMB-207ENST00000468723 PLA2G2CQ5R387 149 aa8.92□□□□□ -0.98
GPNMB-207ENST00000468723 RETREG3Q86VR2 466 aa8.92□□□□□ -0.98
GPNMB-207ENST00000468723 FCF1Q9Y324 198 aaKnown RBP8.92□□□□□ -0.98
GPNMB-207ENST00000468723 HRCP23327 699 aa8.91□□□□□ -0.98
GPNMB-207ENST00000468723 CLK2P49760 499 aaKnown RBP8.91□□□□□ -0.98
GPNMB-207ENST00000468723 QPCTQ16769 361 aa8.91□□□□□ -0.98
GPNMB-207ENST00000468723 GJA5P36382 358 aa8.9□□□□□ -0.98
GPNMB-207ENST00000468723 PROCA1Q8NCQ7 364 aaPredicted RBP8.9□□□□□ -0.98
GPNMB-207ENST00000468723 PRR7Q8TB68 274 aa8.9□□□□□ -0.98
GPNMB-207ENST00000468723 EMID1Q96A84 441 aaPredicted RBP8.9□□□□□ -0.98
GPNMB-207ENST00000468723 NUTM2BA6NNL0 878 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-207ENST00000468723 NUTM2EB1AL46 878 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-207ENST00000468723 DXOO77932 396 aaKnown RBP8.89□□□□□ -0.99
GPNMB-207ENST00000468723 JUNDP17535 347 aa8.89□□□□□ -0.99
GPNMB-207ENST00000468723 MMP16P51512 607 aa8.89□□□□□ -0.99
GPNMB-207ENST00000468723 NUTM2DQ5VT03 806 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-207ENST00000468723 LIAT1Q6ZQX7 453 aa8.89□□□□□ -0.99
GPNMB-207ENST00000468723 NUTM2AQ8IVF1 878 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-207ENST00000468723 CCDC24Q8N4L8 307 aa8.89□□□□□ -0.99
GPNMB-207ENST00000468723 ZBTB3Q9H5J0 574 aa8.89□□□□□ -0.99
GPNMB-207ENST00000468723 SLC19A1P41440 591 aa8.88□□□□□ -0.99
GPNMB-207ENST00000468723 SKIV2LQ15477 1246 aaKnown RBP8.88□□□□□ -0.99
GPNMB-207ENST00000468723 SH3D19Q5HYK7 790 aa8.88□□□□□ -0.99
GPNMB-207ENST00000468723 TSC1Q92574 1164 aa8.88□□□□□ -0.99
GPNMB-207ENST00000468723 SPDYE5A6NIY4 337 aa8.86□□□□□ -0.99
GPNMB-207ENST00000468723 CFAP99D6REC4 459 aa8.86□□□□□ -0.99
GPNMB-207ENST00000468723 RTL5Q5HYW3 569 aaPredicted RBP8.86□□□□□ -0.99
GPNMB-207ENST00000468723 PRPF38BQ5VTL8 546 aaKnown RBP8.86□□□□□ -0.99
GPNMB-207ENST00000468723 V9GY48 417 aaPredicted RBP8.86□□□□□ -0.99
GPNMB-207ENST00000468723 LILRB3O75022 631 aa8.85□□□□□ -0.99
GPNMB-207ENST00000468723 TUSC1Q2TAM9 212 aa8.84□□□□□ -0.99
GPNMB-207ENST00000468723 FBXO31Q5XUX0 539 aaPredicted RBP8.84□□□□□ -0.99
GPNMB-207ENST00000468723 NUDT12Q9BQG2 462 aa8.84□□□□□ -0.99
GPNMB-207ENST00000468723 ZBTB24O43167 697 aaPredicted RBP8.83□□□□□ -1
GPNMB-207ENST00000468723 SPRYD7Q5W111 196 aa8.83□□□□□ -1
GPNMB-207ENST00000468723 PTCRAQ6ISU1 281 aaPredicted RBP8.81□□□□□ -1
GPNMB-207ENST00000468723 PCMTD1Q96MG8 357 aaPredicted RBP8.81□□□□□ -1
GPNMB-207ENST00000468723 ZNF697Q5TEC3 545 aa8.8□□□□□ -1
GPNMB-207ENST00000468723 DESI1Q6ICB0 168 aa8.8□□□□□ -1
GPNMB-207ENST00000468723 ZNF598Q86UK7 904 aaKnown RBP8.8□□□□□ -1
GPNMB-207ENST00000468723 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.8□□□□□ -1
GPNMB-207ENST00000468723 PER1O15534 1290 aaPredicted RBP8.79□□□□□ -1
GPNMB-207ENST00000468723 CD2BP2O95400 341 aaKnown RBP8.79□□□□□ -1
GPNMB-207ENST00000468723 CCNYL3P0C7X3 344 aa8.79□□□□□ -1
GPNMB-207ENST00000468723 RPIAP49247 311 aa8.79□□□□□ -1
GPNMB-207ENST00000468723 PTPRNQ16849 979 aa8.79□□□□□ -1
GPNMB-207ENST00000468723 LYPD8Q6UX82 237 aa8.79□□□□□ -1
GPNMB-207ENST00000468723 CTHP32929 405 aa8.78□□□□□ -1
GPNMB-207ENST00000468723 IRX2Q9BZI1 471 aaPredicted RBP8.78□□□□□ -1
GPNMB-207ENST00000468723 CTDSPL2Q05D32 466 aa8.77□□□□□ -1.01
GPNMB-207ENST00000468723 FOXC1Q12948 553 aa8.77□□□□□ -1.01
GPNMB-207ENST00000468723 TRIM32Q13049 653 aa8.77□□□□□ -1.01
GPNMB-207ENST00000468723 HELBQ8NG08 1087 aaPredicted RBP8.77□□□□□ -1.01
GPNMB-207ENST00000468723 GOPCQ9HD26 462 aa8.77□□□□□ -1.01
GPNMB-207ENST00000468723 EVA1BQ9NVM1 165 aa8.77□□□□□ -1.01
GPNMB-207ENST00000468723 TNFRSF10AO00220 468 aa8.76□□□□□ -1.01
GPNMB-207ENST00000468723 GFRA3O60609 400 aa8.76□□□□□ -1.01
GPNMB-207ENST00000468723 KCNH2Q12809 1159 aa8.76□□□□□ -1.01
GPNMB-207ENST00000468723 PPP2R2DQ66LE6 453 aa8.76□□□□□ -1.01
GPNMB-207ENST00000468723 MAP10Q9P2G4 905 aa8.76□□□□□ -1.01
GPNMB-207ENST00000468723 AP1G2O75843 785 aa8.75□□□□□ -1.01
GPNMB-207ENST00000468723 PDZRN3Q9UPQ7 1066 aa8.75□□□□□ -1.01
GPNMB-207ENST00000468723 LINC01559Q495D7 138 aa8.74□□□□□ -1.01
GPNMB-207ENST00000468723 TRIM67Q6ZTA4 783 aa8.74□□□□□ -1.01
GPNMB-207ENST00000468723 UNC93B1Q9H1C4 597 aa8.74□□□□□ -1.01
GPNMB-207ENST00000468723 RFC5P40937 340 aa8.73□□□□□ -1.01
GPNMB-207ENST00000468723 F12P00748 615 aaPredicted RBP8.72□□□□□ -1.01
GPNMB-207ENST00000468723 SKOR1P84550 965 aa8.72□□□□□ -1.01
GPNMB-207ENST00000468723 LRRN4Q8WUT4 740 aa8.72□□□□□ -1.01
GPNMB-207ENST00000468723 BAP1Q92560 729 aa8.72□□□□□ -1.01
GPNMB-207ENST00000468723 PKD2L1Q9P0L9 805 aa8.72□□□□□ -1.01
GPNMB-207ENST00000468723 GDF9O60383 454 aa8.71□□□□□ -1.02
GPNMB-207ENST00000468723 RC3H1Q5TC82 1133 aaKnown RBP8.69□□□□□ -1.02
GPNMB-207ENST00000468723 NRG2O14511 850 aaPredicted RBP8.68□□□□□ -1.02
GPNMB-207ENST00000468723 USP17L8P0C7I0 530 aa8.68□□□□□ -1.02
GPNMB-207ENST00000468723 WNT7BP56706 349 aa8.68□□□□□ -1.02
GPNMB-207ENST00000468723 SH3BP2P78314 561 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms