RNA–Protein interactions for RNA: ENST00000468619.5

SHANK2-214, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 2

Gene SHANK2, Length 2,775 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-214ENST00000468619 MLECQ14165 292 aa17.14■□□□□ 0.33
SHANK2-214ENST00000468619 MCM4P33991 863 aa17.13■□□□□ 0.33
SHANK2-214ENST00000468619 ZC3H13Q5T200 1668 aaKnown RBP17.13■□□□□ 0.33
SHANK2-214ENST00000468619 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
SHANK2-214ENST00000468619 MYH16Q9H6N6 1097 aa17.12■□□□□ 0.33
SHANK2-214ENST00000468619 RALGAPBQ86X10 1494 aa17.12■□□□□ 0.33
SHANK2-214ENST00000468619 PLEKHH1Q9ULM0 1364 aa17.11■□□□□ 0.33
SHANK2-214ENST00000468619 AGLP35573 1532 aa17.11■□□□□ 0.33
SHANK2-214ENST00000468619 TRAK2O60296 914 aa17.1■□□□□ 0.33
SHANK2-214ENST00000468619 MRE11P49959 708 aa17.1■□□□□ 0.33
SHANK2-214ENST00000468619 KIF1BO60333 1816 aa17.09■□□□□ 0.33
SHANK2-214ENST00000468619 CLTCQ00610 1675 aaKnown RBP17.08■□□□□ 0.33
SHANK2-214ENST00000468619 BCAR3O75815 825 aa17.08■□□□□ 0.33
SHANK2-214ENST00000468619 GOLGA2Q08379 1002 aa17.08■□□□□ 0.33
SHANK2-214ENST00000468619 GRPEL1Q9HAV7 217 aa17.08■□□□□ 0.33
SHANK2-214ENST00000468619 UHRF1BP1Q6BDS2 1440 aa17.08■□□□□ 0.32
SHANK2-214ENST00000468619 MROH2AA6NES4 1674 aa17.07■□□□□ 0.32
SHANK2-214ENST00000468619 TRIM44Q96DX7 344 aaPredicted RBP17.06■□□□□ 0.32
SHANK2-214ENST00000468619 PDCL3Q9H2J4 239 aa17.06■□□□□ 0.32
SHANK2-214ENST00000468619 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
SHANK2-214ENST00000468619 PANK3Q9H999 370 aa17.06■□□□□ 0.32
SHANK2-214ENST00000468619 NLRP1Q9C000 1473 aa17.05■□□□□ 0.32
SHANK2-214ENST00000468619 PRAG1Q86YV5 1406 aa17.05■□□□□ 0.32
SHANK2-214ENST00000468619 SYNMO15061 1565 aa17.05■□□□□ 0.32
SHANK2-214ENST00000468619 CHGAP10645 457 aaKnown RBP17.05■□□□□ 0.32
SHANK2-214ENST00000468619 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
SHANK2-214ENST00000468619 MAPK8IP3Q9UPT6 1336 aa17.03■□□□□ 0.32
SHANK2-214ENST00000468619 TPM2P07951 284 aa17.03■□□□□ 0.32
SHANK2-214ENST00000468619 TBC1D32Q96NH3 1257 aa17.03■□□□□ 0.32
SHANK2-214ENST00000468619 ARHGAP31Q2M1Z3 1444 aa17.03■□□□□ 0.32
SHANK2-214ENST00000468619 EIF3AQ14152 1382 aaKnown RBP17.03■□□□□ 0.32
SHANK2-214ENST00000468619 NOS1P29475 1434 aa17.03■□□□□ 0.32
SHANK2-214ENST00000468619 WDR43Q15061 677 aaKnown RBP eCLIP17.03■□□□□ 0.32
SHANK2-214ENST00000468619 TRPM1Q7Z4N2 1603 aa17.03■□□□□ 0.32
SHANK2-214ENST00000468619 SPINK5Q9NQ38 1064 aaPredicted RBP17.02■□□□□ 0.32
SHANK2-214ENST00000468619 INSRP06213 1382 aa17.02■□□□□ 0.32
SHANK2-214ENST00000468619 FBXO31Q5XUX0 539 aaPredicted RBP17.02■□□□□ 0.31
SHANK2-214ENST00000468619 KIAA1211Q6ZU35 1233 aa17.02■□□□□ 0.31
SHANK2-214ENST00000468619 SLFN5Q08AF3 891 aa17.01■□□□□ 0.31
SHANK2-214ENST00000468619 VIRMAQ69YN4 1812 aaKnown RBP17.01■□□□□ 0.31
SHANK2-214ENST00000468619 A0A0U1RQG5 324 aaPredicted RBP17.01■□□□□ 0.31
SHANK2-214ENST00000468619 ZNF521Q96K83 1311 aa17■□□□□ 0.31
SHANK2-214ENST00000468619 RBM10P98175 930 aaKnown RBP17■□□□□ 0.31
SHANK2-214ENST00000468619 COG6Q9Y2V7 657 aa17■□□□□ 0.31
SHANK2-214ENST00000468619 CCDC146Q8IYE0 955 aa17■□□□□ 0.31
SHANK2-214ENST00000468619 ADGRB3O60242 1522 aa16.99■□□□□ 0.31
SHANK2-214ENST00000468619 PIK3C2BO00750 1634 aa16.99■□□□□ 0.31
SHANK2-214ENST00000468619 CHMP5Q9NZZ3 219 aa16.99■□□□□ 0.31
SHANK2-214ENST00000468619 MADDQ8WXG6 1647 aa16.99■□□□□ 0.31
SHANK2-214ENST00000468619 NBPF1Q3BBV0 1214 aa16.99■□□□□ 0.31
SHANK2-214ENST00000468619 PANK1Q8TE04 598 aa16.99■□□□□ 0.31
SHANK2-214ENST00000468619 CLUAP1Q96AJ1 413 aa16.98■□□□□ 0.31
SHANK2-214ENST00000468619 PRDM4Q9UKN5 801 aa16.98■□□□□ 0.31
SHANK2-214ENST00000468619 GAS2L3Q86XJ1 694 aa16.98■□□□□ 0.31
SHANK2-214ENST00000468619 ESF1Q9H501 851 aaKnown RBP16.98■□□□□ 0.31
SHANK2-214ENST00000468619 PPP6R1Q9UPN7 881 aa16.98■□□□□ 0.31
SHANK2-214ENST00000468619 IFT172Q9UG01 1749 aa16.98■□□□□ 0.31
SHANK2-214ENST00000468619 CENPJQ9HC77 1338 aaPredicted RBP16.97■□□□□ 0.31
SHANK2-214ENST00000468619 NEURL4Q96JN8 1562 aa16.97■□□□□ 0.31
SHANK2-214ENST00000468619 CALD1Q05682 793 aaKnown RBP16.97■□□□□ 0.31
SHANK2-214ENST00000468619 MYO5BQ9ULV0 1848 aa16.97■□□□□ 0.31
SHANK2-214ENST00000468619 CANXP27824 592 aaKnown RBP16.96■□□□□ 0.31
SHANK2-214ENST00000468619 IDI1Q13907 227 aa16.96■□□□□ 0.31
SHANK2-214ENST00000468619 ERVK-7P63135 1459 aa16.96■□□□□ 0.31
SHANK2-214ENST00000468619 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
SHANK2-214ENST00000468619 CGNL1Q0VF96 1302 aa16.94■□□□□ 0.3
SHANK2-214ENST00000468619 PPLO60437 1756 aa16.94■□□□□ 0.3
SHANK2-214ENST00000468619 ADGRF5Q8IZF2 1346 aa16.93■□□□□ 0.3
SHANK2-214ENST00000468619 PPP2R1AP30153 589 aa16.93■□□□□ 0.3
SHANK2-214ENST00000468619 ZMYM3Q14202 1370 aa16.93■□□□□ 0.3
SHANK2-214ENST00000468619 DDX11L8A8MPP1 907 aa16.93■□□□□ 0.3
SHANK2-214ENST00000468619 APAF1O14727 1248 aa16.92■□□□□ 0.3
SHANK2-214ENST00000468619 NUTM2DQ5VT03 806 aaPredicted RBP16.92■□□□□ 0.3
SHANK2-214ENST00000468619 TRMT2AQ8IZ69 625 aaKnown RBP16.92■□□□□ 0.3
SHANK2-214ENST00000468619 ARID3AQ99856 593 aa16.92■□□□□ 0.3
SHANK2-214ENST00000468619 FAM13BQ9NYF5 915 aa16.92■□□□□ 0.3
SHANK2-214ENST00000468619 MFAP1P55081 439 aaKnown RBP16.91■□□□□ 0.3
SHANK2-214ENST00000468619 SLC52A1Q9NWF4 448 aa16.91■□□□□ 0.3
SHANK2-214ENST00000468619 PDZRN3Q9UPQ7 1066 aa16.91■□□□□ 0.3
SHANK2-214ENST00000468619 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
SHANK2-214ENST00000468619 NKTRP30414 1462 aaKnown RBP16.91■□□□□ 0.3
SHANK2-214ENST00000468619 RIPK4P57078 832 aa16.91■□□□□ 0.3
SHANK2-214ENST00000468619 SPATA31D1Q6ZQQ2 1576 aa16.9■□□□□ 0.3
SHANK2-214ENST00000468619 TESK2Q96S53 571 aa16.9■□□□□ 0.3
SHANK2-214ENST00000468619 MYOM2P54296 1465 aa16.9■□□□□ 0.3
SHANK2-214ENST00000468619 C22orf23Q9BZE7 217 aa16.9■□□□□ 0.3
SHANK2-214ENST00000468619 ISY1Q9ULR0 285 aaKnown RBP16.9■□□□□ 0.3
SHANK2-214ENST00000468619 TMEM131LA2VDJ0 1609 aa16.9■□□□□ 0.3
SHANK2-214ENST00000468619 PLPPR3Q6T4P5 718 aa16.89■□□□□ 0.3
SHANK2-214ENST00000468619 PDE3AQ14432 1141 aa16.89■□□□□ 0.29
SHANK2-214ENST00000468619 SENP3Q9H4L4 574 aaPredicted RBP16.89■□□□□ 0.29
SHANK2-214ENST00000468619 PCDHB15Q9Y5E8 787 aa16.89■□□□□ 0.29
SHANK2-214ENST00000468619 GPRASP1Q5JY77 1395 aa16.89■□□□□ 0.29
SHANK2-214ENST00000468619 FER1L4A9Z1Z3 1794 aa16.88■□□□□ 0.29
SHANK2-214ENST00000468619 LAMC1P11047 1609 aa16.88■□□□□ 0.29
SHANK2-214ENST00000468619 CFAP70Q5T0N1 1121 aa16.88■□□□□ 0.29
SHANK2-214ENST00000468619 STAC3Q96MF2 364 aa16.88■□□□□ 0.29
SHANK2-214ENST00000468619 NEXMIFQ5QGS0 1516 aa16.87■□□□□ 0.29
SHANK2-214ENST00000468619 KNSTRNQ9Y448 316 aa16.87■□□□□ 0.29
SHANK2-214ENST00000468619 ZNF692Q9BU19 519 aaPredicted RBP16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms