RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 ADGRL3Q9HAR2 1447 aa15.91■□□□□ 0.14
MSH5-214ENST00000468602 XIRP1Q702N8 1843 aaKnown RBP15.9■□□□□ 0.14
MSH5-214ENST00000468602 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.9■□□□□ 0.14
MSH5-214ENST00000468602 CDC42BPGQ6DT37 1551 aa15.89■□□□□ 0.13
MSH5-214ENST00000468602 PRAM1Q96QH2 718 aa15.89■□□□□ 0.13
MSH5-214ENST00000468602 PLEKHH1Q9ULM0 1364 aa15.88■□□□□ 0.13
MSH5-214ENST00000468602 ST20-MTHFSA0A0A6YYL1 179 aa15.88■□□□□ 0.13
MSH5-214ENST00000468602 STK26Q9P289 416 aa15.88■□□□□ 0.13
MSH5-214ENST00000468602 QRICH2Q9H0J4 1663 aa15.88■□□□□ 0.13
MSH5-214ENST00000468602 TMEM94Q12767 1356 aa15.87■□□□□ 0.13
MSH5-214ENST00000468602 HSPA5P11021 654 aaKnown RBP15.86■□□□□ 0.13
MSH5-214ENST00000468602 WAPLQ7Z5K2 1190 aa15.86■□□□□ 0.13
MSH5-214ENST00000468602 PROSER2Q86WR7 435 aaPredicted RBP15.86■□□□□ 0.13
MSH5-214ENST00000468602 C19orf44Q9H6X5 657 aa15.86■□□□□ 0.13
MSH5-214ENST00000468602 NALCNQ8IZF0 1738 aa15.85■□□□□ 0.13
MSH5-214ENST00000468602 SENP3Q9H4L4 574 aaPredicted RBP15.85■□□□□ 0.13
MSH5-214ENST00000468602 POGKQ9P215 609 aa15.85■□□□□ 0.13
MSH5-214ENST00000468602 TULP4Q9NRJ4 1543 aa15.84■□□□□ 0.13
MSH5-214ENST00000468602 ANKARQ7Z5J8 1434 aa15.83■□□□□ 0.12
MSH5-214ENST00000468602 WASLO00401 505 aaPredicted RBP15.82■□□□□ 0.12
MSH5-214ENST00000468602 CDCA8Q53HL2 280 aa15.81■□□□□ 0.12
MSH5-214ENST00000468602 EVC2Q86UK5 1308 aa15.81■□□□□ 0.12
MSH5-214ENST00000468602 FMN2Q9NZ56 1722 aa15.81■□□□□ 0.12
MSH5-214ENST00000468602 MSH6P52701 1360 aa15.8■□□□□ 0.12
MSH5-214ENST00000468602 TMF1P82094 1093 aa15.8■□□□□ 0.12
MSH5-214ENST00000468602 NINLQ9Y2I6 1382 aa15.79■□□□□ 0.12
MSH5-214ENST00000468602 CADPS2Q86UW7 1296 aa15.79■□□□□ 0.12
MSH5-214ENST00000468602 ATP7BP35670 1465 aa15.78■□□□□ 0.12
MSH5-214ENST00000468602 ATAD2Q6PL18 1390 aa15.77■□□□□ 0.12
MSH5-214ENST00000468602 MST1RQ04912 1400 aa15.77■□□□□ 0.11
MSH5-214ENST00000468602 TOPAZ1Q8N9V7 1692 aa15.76■□□□□ 0.11
MSH5-214ENST00000468602 USP32Q8NFA0 1604 aa15.76■□□□□ 0.11
MSH5-214ENST00000468602 MINK1Q8N4C8 1332 aaPredicted RBP15.76■□□□□ 0.11
MSH5-214ENST00000468602 CDK19Q9BWU1 502 aa15.76■□□□□ 0.11
MSH5-214ENST00000468602 C1orf167Q5SNV9 1468 aa15.74■□□□□ 0.11
MSH5-214ENST00000468602 SAFB2Q14151 953 aaKnown RBP eCLIP15.74■□□□□ 0.11
MSH5-214ENST00000468602 ITSN1Q15811 1721 aa15.74■□□□□ 0.11
MSH5-214ENST00000468602 PLEKHG3A1L390 1219 aa15.73■□□□□ 0.11
MSH5-214ENST00000468602 C11orf95C9JLR9 678 aaPredicted RBP15.73■□□□□ 0.11
MSH5-214ENST00000468602 CCDC61Q9Y6R9 512 aa15.73■□□□□ 0.11
MSH5-214ENST00000468602 PRR36Q9H6K5 1346 aa15.72■□□□□ 0.11
MSH5-214ENST00000468602 ATF3P18847 181 aa15.72■□□□□ 0.11
MSH5-214ENST00000468602 CCDC7Q96M83 1385 aa15.72■□□□□ 0.11
MSH5-214ENST00000468602 KIF7Q2M1P5 1343 aa15.71■□□□□ 0.11
MSH5-214ENST00000468602 NUDT16Q96DE0 195 aaKnown RBP15.71■□□□□ 0.11
MSH5-214ENST00000468602 HIRIP3Q9BW71 556 aaPredicted RBP15.71■□□□□ 0.11
MSH5-214ENST00000468602 POLR3AO14802 1390 aaPredicted RBP15.71■□□□□ 0.11
MSH5-214ENST00000468602 BRD4O60885 1362 aaPredicted RBP15.71■□□□□ 0.11
MSH5-214ENST00000468602 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
MSH5-214ENST00000468602 KIF1AQ12756 1690 aa15.7■□□□□ 0.1
MSH5-214ENST00000468602 RBM33Q96EV2 1170 aaKnown RBP15.7■□□□□ 0.1
MSH5-214ENST00000468602 MYOM1P52179 1685 aa15.7■□□□□ 0.1
MSH5-214ENST00000468602 CPSF1Q10570 1443 aaKnown RBP15.69■□□□□ 0.1
MSH5-214ENST00000468602 ZNF316A6NFI3 1004 aaPredicted RBP15.69■□□□□ 0.1
MSH5-214ENST00000468602 C14orf37Q86TY3 774 aa15.69■□□□□ 0.1
MSH5-214ENST00000468602 SLAIN2Q9P270 581 aa15.69■□□□□ 0.1
MSH5-214ENST00000468602 TOM1O60784 492 aa15.68■□□□□ 0.1
MSH5-214ENST00000468602 SRPK2P78362 688 aaKnown RBP15.68■□□□□ 0.1
MSH5-214ENST00000468602 CABP2Q9NPB3 220 aa15.68■□□□□ 0.1
MSH5-214ENST00000468602 CD163L1Q9NR16 1453 aa15.67■□□□□ 0.1
MSH5-214ENST00000468602 RGPD8O14715 1765 aaPredicted RBP15.67■□□□□ 0.1
MSH5-214ENST00000468602 PPIP5K1Q6PFW1 1433 aa15.66■□□□□ 0.1
MSH5-214ENST00000468602 MED1Q15648 1581 aaPredicted RBP15.66■□□□□ 0.1
MSH5-214ENST00000468602 ANKRD36BQ8N2N9 1353 aa15.65■□□□□ 0.1
MSH5-214ENST00000468602 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
MSH5-214ENST00000468602 AKAP12Q02952 1782 aa15.64■□□□□ 0.1
MSH5-214ENST00000468602 BRINP3Q76B58 766 aa15.64■□□□□ 0.09
MSH5-214ENST00000468602 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
MSH5-214ENST00000468602 UBAP1LF5GYI3 381 aa15.63■□□□□ 0.09
MSH5-214ENST00000468602 CABP1Q9NZU7 370 aa15.63■□□□□ 0.09
MSH5-214ENST00000468602 PHF8Q9UPP1 1060 aa15.63■□□□□ 0.09
MSH5-214ENST00000468602 AHDC1Q5TGY3 1603 aaPredicted RBP15.63■□□□□ 0.09
MSH5-214ENST00000468602 NHSL1Q5SYE7 1610 aa15.62■□□□□ 0.09
MSH5-214ENST00000468602 MON2Q7Z3U7 1717 aa15.62■□□□□ 0.09
MSH5-214ENST00000468602 ORAI2Q96SN7 254 aa15.61■□□□□ 0.09
MSH5-214ENST00000468602 SLC12A5Q9H2X9 1139 aa15.61■□□□□ 0.09
MSH5-214ENST00000468602 TERF2IPQ9NYB0 399 aa15.61■□□□□ 0.09
MSH5-214ENST00000468602 PER1O15534 1290 aaPredicted RBP15.6■□□□□ 0.09
MSH5-214ENST00000468602 ESCO1Q5FWF5 840 aa15.6■□□□□ 0.09
MSH5-214ENST00000468602 ACEP12821 1306 aa15.6■□□□□ 0.09
MSH5-214ENST00000468602 SOS2Q07890 1332 aaPredicted RBP15.6■□□□□ 0.09
MSH5-214ENST00000468602 NPHP3Q7Z494 1330 aa15.6■□□□□ 0.09
MSH5-214ENST00000468602 ROBO1Q9Y6N7 1651 aa15.6■□□□□ 0.09
MSH5-214ENST00000468602 USP6P35125 1406 aa15.6■□□□□ 0.09
MSH5-214ENST00000468602 NRKQ7Z2Y5 1582 aa15.59■□□□□ 0.09
MSH5-214ENST00000468602 A0A1W2PP64 1363 aa15.59■□□□□ 0.09
MSH5-214ENST00000468602 SBNO1A3KN83 1393 aa15.59■□□□□ 0.09
MSH5-214ENST00000468602 NPC1L1Q9UHC9 1359 aa15.59■□□□□ 0.09
MSH5-214ENST00000468602 EDC4Q6P2E9 1401 aaKnown RBP15.59■□□□□ 0.09
MSH5-214ENST00000468602 PXDNQ92626 1479 aa15.59■□□□□ 0.09
MSH5-214ENST00000468602 USP54Q70EL1 1684 aa15.57■□□□□ 0.08
MSH5-214ENST00000468602 TRPM3Q9HCF6 1732 aaPredicted RBP15.57■□□□□ 0.08
MSH5-214ENST00000468602 HDGFL2Q7Z4V5 671 aaPredicted RBP15.57■□□□□ 0.08
MSH5-214ENST00000468602 PHF23Q9BUL5 403 aaPredicted RBP15.57■□□□□ 0.08
MSH5-214ENST00000468602 TTC21AQ8NDW8 1320 aa15.56■□□□□ 0.08
MSH5-214ENST00000468602 KTN1Q86UP2 1357 aaKnown RBP15.55■□□□□ 0.08
MSH5-214ENST00000468602 NUTM2FA1L443 756 aa15.55■□□□□ 0.08
MSH5-214ENST00000468602 CARD14Q9BXL6 1004 aa15.55■□□□□ 0.08
MSH5-214ENST00000468602 NSD2O96028 1365 aa15.54■□□□□ 0.08
MSH5-214ENST00000468602 USP31Q70CQ4 1352 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms