RNA–Protein interactions for RNA: ENST00000468149.5

MSL3-210, Transcript of MSL complex subunit 3, humanhuman

TSL 2

Gene MSL3, Length 1,646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-210ENST00000468149 CHD2O14647 1828 aaKnown RBP10.34□□□□□ -0.75
MSL3-210ENST00000468149 CCDC144AA2RUR9 1427 aa10.33□□□□□ -0.76
MSL3-210ENST00000468149 RIMS2Q9UQ26 1411 aa10.33□□□□□ -0.76
MSL3-210ENST00000468149 NEXMIFQ5QGS0 1516 aa10.33□□□□□ -0.76
MSL3-210ENST00000468149 IGSF3O75054 1194 aa10.32□□□□□ -0.76
MSL3-210ENST00000468149 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.32□□□□□ -0.76
MSL3-210ENST00000468149 DIP2AQ14689 1571 aa10.32□□□□□ -0.76
MSL3-210ENST00000468149 CPS1P31327 1500 aa10.31□□□□□ -0.76
MSL3-210ENST00000468149 PLEKHG1Q9ULL1 1385 aa10.31□□□□□ -0.76
MSL3-210ENST00000468149 IQSEC2Q5JU85 1478 aa10.31□□□□□ -0.76
MSL3-210ENST00000468149 NRXN3Q9Y4C0 1643 aa10.31□□□□□ -0.76
MSL3-210ENST00000468149 XIRP1Q702N8 1843 aaKnown RBP10.3□□□□□ -0.76
MSL3-210ENST00000468149 SETBP1Q9Y6X0 1596 aa10.3□□□□□ -0.76
MSL3-210ENST00000468149 HMGB1P09429 215 aaKnown RBP10.29□□□□□ -0.76
MSL3-210ENST00000468149 ZNF335Q9H4Z2 1342 aaPredicted RBP10.29□□□□□ -0.76
MSL3-210ENST00000468149 PLCD3Q8N3E9 789 aa10.29□□□□□ -0.76
MSL3-210ENST00000468149 KCNV2Q8TDN2 545 aa10.29□□□□□ -0.76
MSL3-210ENST00000468149 SPATA31E1Q6ZUB1 1445 aa10.28□□□□□ -0.76
MSL3-210ENST00000468149 NWD1Q149M9 1564 aa10.28□□□□□ -0.76
MSL3-210ENST00000468149 SETD1AO15047 1707 aaKnown RBP10.28□□□□□ -0.76
MSL3-210ENST00000468149 ANKRD30BQ9BXX2 1392 aa10.28□□□□□ -0.76
MSL3-210ENST00000468149 APBB1O00213 710 aa10.28□□□□□ -0.76
MSL3-210ENST00000468149 PPP1R15AO75807 674 aaPredicted RBP10.28□□□□□ -0.76
MSL3-210ENST00000468149 RPGRIP1LQ68CZ1 1315 aa10.28□□□□□ -0.76
MSL3-210ENST00000468149 ZNF326Q5BKZ1 582 aaKnown RBP10.27□□□□□ -0.77
MSL3-210ENST00000468149 CERKQ8TCT0 537 aa10.27□□□□□ -0.77
MSL3-210ENST00000468149 KCTD17Q8N5Z5 321 aa10.26□□□□□ -0.77
MSL3-210ENST00000468149 ADAMTS13Q76LX8 1427 aa10.26□□□□□ -0.77
MSL3-210ENST00000468149 VGFO15240 615 aaPredicted RBP10.25□□□□□ -0.77
MSL3-210ENST00000468149 TBX22Q9Y458 520 aa10.25□□□□□ -0.77
MSL3-210ENST00000468149 PIK3R4Q99570 1358 aa10.24□□□□□ -0.77
MSL3-210ENST00000468149 NKTRP30414 1462 aaKnown RBP10.24□□□□□ -0.77
MSL3-210ENST00000468149 NUTM2DQ5VT03 806 aaPredicted RBP10.24□□□□□ -0.77
MSL3-210ENST00000468149 SLC26A8Q96RN1 970 aa10.24□□□□□ -0.77
MSL3-210ENST00000468149 LAMC1P11047 1609 aa10.24□□□□□ -0.77
MSL3-210ENST00000468149 XRN1Q8IZH2 1706 aaKnown RBP10.24□□□□□ -0.77
MSL3-210ENST00000468149 LRRC7Q96NW7 1537 aa10.23□□□□□ -0.77
MSL3-210ENST00000468149 CDK11BP21127 795 aaKnown RBP10.23□□□□□ -0.77
MSL3-210ENST00000468149 KCNA6P17658 529 aa10.22□□□□□ -0.77
MSL3-210ENST00000468149 ALKQ9UM73 1620 aa10.22□□□□□ -0.77
MSL3-210ENST00000468149 RAD21O60216 631 aa10.22□□□□□ -0.77
MSL3-210ENST00000468149 FBXO41Q8TF61 875 aa10.22□□□□□ -0.77
MSL3-210ENST00000468149 RNF25Q96BH1 459 aaPredicted RBP10.22□□□□□ -0.77
MSL3-210ENST00000468149 MYOM2P54296 1465 aa10.21□□□□□ -0.77
MSL3-210ENST00000468149 SPDYE2BA6NHP3 402 aa10.21□□□□□ -0.78
MSL3-210ENST00000468149 SOCS7O14512 581 aa10.21□□□□□ -0.78
MSL3-210ENST00000468149 SPDYE6P0CI01 402 aa10.21□□□□□ -0.78
MSL3-210ENST00000468149 RGL3Q3MIN7 710 aa10.21□□□□□ -0.78
MSL3-210ENST00000468149 SPDYE2Q495Y8 402 aa10.21□□□□□ -0.78
MSL3-210ENST00000468149 NRXN1Q9ULB1 1477 aa10.21□□□□□ -0.78
MSL3-210ENST00000468149 PIK3C2GO75747 1445 aa10.2□□□□□ -0.78
MSL3-210ENST00000468149 HSP90B1P14625 803 aaKnown RBP10.2□□□□□ -0.78
MSL3-210ENST00000468149 KNDC1Q76NI1 1749 aa10.2□□□□□ -0.78
MSL3-210ENST00000468149 STAC3Q96MF2 364 aa10.19□□□□□ -0.78
MSL3-210ENST00000468149 DHX57Q6P158 1386 aaKnown RBP10.19□□□□□ -0.78
MSL3-210ENST00000468149 RGS22Q8NE09 1264 aa10.18□□□□□ -0.78
MSL3-210ENST00000468149 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
MSL3-210ENST00000468149 PRAG1Q86YV5 1406 aa10.18□□□□□ -0.78
MSL3-210ENST00000468149 NCOA3Q9Y6Q9 1424 aa10.18□□□□□ -0.78
MSL3-210ENST00000468149 KIAA1210Q9ULL0 1709 aa10.18□□□□□ -0.78
MSL3-210ENST00000468149 PTPRUQ92729 1446 aa10.17□□□□□ -0.78
MSL3-210ENST00000468149 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.17□□□□□ -0.78
MSL3-210ENST00000468149 METP08581 1390 aa10.17□□□□□ -0.78
MSL3-210ENST00000468149 ADGRF5Q8IZF2 1346 aa10.17□□□□□ -0.78
MSL3-210ENST00000468149 ZNF692Q9BU19 519 aaPredicted RBP10.17□□□□□ -0.78
MSL3-210ENST00000468149 ZMYND10O75800 440 aa10.16□□□□□ -0.78
MSL3-210ENST00000468149 IL27Q8NEV9 243 aa10.16□□□□□ -0.78
MSL3-210ENST00000468149 TMEM94Q12767 1356 aa10.16□□□□□ -0.78
MSL3-210ENST00000468149 NALCNQ8IZF0 1738 aa10.15□□□□□ -0.78
MSL3-210ENST00000468149 PROSER2Q86WR7 435 aaPredicted RBP10.15□□□□□ -0.78
MSL3-210ENST00000468149 MIER1Q8N108 512 aa10.15□□□□□ -0.78
MSL3-210ENST00000468149 RYDENQ9NUL5 291 aaKnown RBP10.15□□□□□ -0.78
MSL3-210ENST00000468149 AMOTL2Q9Y2J4 779 aa10.15□□□□□ -0.78
MSL3-210ENST00000468149 PTCH1Q13635 1447 aa10.15□□□□□ -0.78
MSL3-210ENST00000468149 ASXL1Q8IXJ9 1541 aa10.15□□□□□ -0.78
MSL3-210ENST00000468149 TOM1O60784 492 aa10.15□□□□□ -0.79
MSL3-210ENST00000468149 SSUH2Q9Y2M2 353 aa10.15□□□□□ -0.79
MSL3-210ENST00000468149 MKRN3Q13064 507 aaKnown RBP10.14□□□□□ -0.79
MSL3-210ENST00000468149 DCAF11Q8TEB1 546 aa10.14□□□□□ -0.79
MSL3-210ENST00000468149 TRAIPQ9BWF2 469 aa10.14□□□□□ -0.79
MSL3-210ENST00000468149 TECPR2O15040 1411 aa10.13□□□□□ -0.79
MSL3-210ENST00000468149 UBAP1LF5GYI3 381 aa10.13□□□□□ -0.79
MSL3-210ENST00000468149 PCGF6Q9BYE7 350 aa10.13□□□□□ -0.79
MSL3-210ENST00000468149 C14orf93Q9H972 538 aaKnown RBP10.13□□□□□ -0.79
MSL3-210ENST00000468149 MSH6P52701 1360 aa10.13□□□□□ -0.79
MSL3-210ENST00000468149 GPBP1L1Q9HC44 474 aaPredicted RBP10.12□□□□□ -0.79
MSL3-210ENST00000468149 ADGRB1O14514 1584 aa10.12□□□□□ -0.79
MSL3-210ENST00000468149 DCCP43146 1447 aa10.12□□□□□ -0.79
MSL3-210ENST00000468149 CCDC82Q8N4S0 544 aa10.11□□□□□ -0.79
MSL3-210ENST00000468149 PUS7Q96PZ0 661 aaKnown RBP10.11□□□□□ -0.79
MSL3-210ENST00000468149 MTMR7Q9Y216 660 aa10.11□□□□□ -0.79
MSL3-210ENST00000468149 ROBO1Q9Y6N7 1651 aa10.11□□□□□ -0.79
MSL3-210ENST00000468149 YTHDC2Q9H6S0 1430 aaKnown RBP10.11□□□□□ -0.79
MSL3-210ENST00000468149 ARHGEF28Q8N1W1 1705 aaKnown RBP10.11□□□□□ -0.79
MSL3-210ENST00000468149 C19orf44Q9H6X5 657 aa10.11□□□□□ -0.79
MSL3-210ENST00000468149 ABCC11Q96J66 1382 aa10.11□□□□□ -0.79
MSL3-210ENST00000468149 TRPM1Q7Z4N2 1603 aa10.1□□□□□ -0.79
MSL3-210ENST00000468149 LRPPRCP42704 1394 aaKnown RBP10.1□□□□□ -0.79
MSL3-210ENST00000468149 STK25O00506 426 aa10.1□□□□□ -0.79
MSL3-210ENST00000468149 DLC1Q96QB1 1528 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms