RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 AMHR2Q16671 573 aa8.98□□□□□ -0.97
U2AF1-207ENST00000468039 SWT1Q5T5J6 900 aaKnown RBP8.98□□□□□ -0.97
U2AF1-207ENST00000468039 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
U2AF1-207ENST00000468039 ZNF697Q5TEC3 545 aa8.98□□□□□ -0.97
U2AF1-207ENST00000468039 SAMD7Q7Z3H4 446 aa8.98□□□□□ -0.97
U2AF1-207ENST00000468039 SLF2Q8IX21 1173 aa8.98□□□□□ -0.97
U2AF1-207ENST00000468039 NECTIN2Q92692 538 aa8.98□□□□□ -0.97
U2AF1-207ENST00000468039 TNFRSF10AO00220 468 aa8.97□□□□□ -0.97
U2AF1-207ENST00000468039 PHOX2BQ99453 314 aa8.97□□□□□ -0.97
U2AF1-207ENST00000468039 GPCPD1Q9NPB8 672 aa8.97□□□□□ -0.97
U2AF1-207ENST00000468039 DAXXQ9UER7 740 aaPredicted RBP8.97□□□□□ -0.97
U2AF1-207ENST00000468039 PDE4DQ08499 809 aa8.96□□□□□ -0.98
U2AF1-207ENST00000468039 LCE2CQ5TA81 110 aa8.96□□□□□ -0.98
U2AF1-207ENST00000468039 SULF1Q8IWU6 871 aa8.96□□□□□ -0.98
U2AF1-207ENST00000468039 NLRP7Q8WX94 980 aa8.96□□□□□ -0.98
U2AF1-207ENST00000468039 SUPT5HO00267 1087 aaKnown RBP8.95□□□□□ -0.98
U2AF1-207ENST00000468039 EMID1Q96A84 441 aaPredicted RBP8.95□□□□□ -0.98
U2AF1-207ENST00000468039 ZSCAN1Q8NBB4 408 aa8.94□□□□□ -0.98
U2AF1-207ENST00000468039 RNF223E7ERA6 249 aa8.93□□□□□ -0.98
U2AF1-207ENST00000468039 DACH1Q9UI36 760 aa8.93□□□□□ -0.98
U2AF1-207ENST00000468039 ERCC6Q03468 1493 aa8.93□□□□□ -0.98
U2AF1-207ENST00000468039 DDX11L8A8MPP1 907 aa8.92□□□□□ -0.98
U2AF1-207ENST00000468039 NEUROD2Q15784 382 aa8.92□□□□□ -0.98
U2AF1-207ENST00000468039 RDH13Q8NBN7 331 aa8.92□□□□□ -0.98
U2AF1-207ENST00000468039 LAMC3Q9Y6N6 1575 aa8.91□□□□□ -0.98
U2AF1-207ENST00000468039 CCDC88BA6NC98 1476 aa8.91□□□□□ -0.98
U2AF1-207ENST00000468039 CADPSQ9ULU8 1353 aa8.91□□□□□ -0.98
U2AF1-207ENST00000468039 AXIN1O15169 862 aa8.91□□□□□ -0.98
U2AF1-207ENST00000468039 CTC1Q2NKJ3 1217 aa8.91□□□□□ -0.98
U2AF1-207ENST00000468039 AVPP01185 164 aa8.9□□□□□ -0.98
U2AF1-207ENST00000468039 APLP1P51693 650 aa8.9□□□□□ -0.98
U2AF1-207ENST00000468039 GIGYF2Q6Y7W6 1299 aaKnown RBP8.9□□□□□ -0.98
U2AF1-207ENST00000468039 PARP9Q8IXQ6 854 aa8.9□□□□□ -0.98
U2AF1-207ENST00000468039 SSTR3P32745 418 aaPredicted RBP8.89□□□□□ -0.99
U2AF1-207ENST00000468039 ANKLE1Q8NAG6 615 aa8.89□□□□□ -0.99
U2AF1-207ENST00000468039 PRR14Q9BWN1 585 aa8.89□□□□□ -0.99
U2AF1-207ENST00000468039 ZPR1O75312 459 aa8.88□□□□□ -0.99
U2AF1-207ENST00000468039 COPS2P61201 443 aa8.88□□□□□ -0.99
U2AF1-207ENST00000468039 KMT5BQ4FZB7 885 aa8.88□□□□□ -0.99
U2AF1-207ENST00000468039 FAM217BQ9NTX9 383 aaPredicted RBP8.88□□□□□ -0.99
U2AF1-207ENST00000468039 REPIN1Q9BWE0 567 aaKnown RBP8.87□□□□□ -0.99
U2AF1-207ENST00000468039 KIF21AQ7Z4S6 1674 aa8.87□□□□□ -0.99
U2AF1-207ENST00000468039 CFTRP13569 1480 aa8.86□□□□□ -0.99
U2AF1-207ENST00000468039 KDM4CQ9H3R0 1056 aa8.86□□□□□ -0.99
U2AF1-207ENST00000468039 PDS5BQ9NTI5 1447 aa8.86□□□□□ -0.99
U2AF1-207ENST00000468039 CFHP08603 1231 aa8.85□□□□□ -0.99
U2AF1-207ENST00000468039 SMCPP49901 116 aaPredicted RBP8.85□□□□□ -0.99
U2AF1-207ENST00000468039 LIAT1Q6ZQX7 453 aa8.85□□□□□ -0.99
U2AF1-207ENST00000468039 SLC16A10Q8TF71 515 aa8.85□□□□□ -0.99
U2AF1-207ENST00000468039 GPBP1L1Q9HC44 474 aaPredicted RBP8.85□□□□□ -0.99
U2AF1-207ENST00000468039 SLC10A3P09131 477 aa8.84□□□□□ -0.99
U2AF1-207ENST00000468039 CD46P15529 392 aa8.84□□□□□ -0.99
U2AF1-207ENST00000468039 LORP23490 312 aaPredicted RBP8.84□□□□□ -0.99
U2AF1-207ENST00000468039 BRPF1P55201 1214 aaPredicted RBP8.84□□□□□ -0.99
U2AF1-207ENST00000468039 NUTM1Q86Y26 1132 aa8.83□□□□□ -1
U2AF1-207ENST00000468039 FANCD2Q9BXW9 1451 aa8.83□□□□□ -1
U2AF1-207ENST00000468039 THOC2Q8NI27 1593 aaKnown RBP8.82□□□□□ -1
U2AF1-207ENST00000468039 GCGRP47871 477 aa8.82□□□□□ -1
U2AF1-207ENST00000468039 GRIPAP1Q4V328 841 aa8.82□□□□□ -1
U2AF1-207ENST00000468039 DDRGK1Q96HY6 314 aa8.82□□□□□ -1
U2AF1-207ENST00000468039 BEGAINQ9BUH8 593 aa8.82□□□□□ -1
U2AF1-207ENST00000468039 MS4A1P11836 297 aa8.81□□□□□ -1
U2AF1-207ENST00000468039 DIXDC1Q155Q3 683 aa8.81□□□□□ -1
U2AF1-207ENST00000468039 KCTD17Q8N5Z5 321 aa8.81□□□□□ -1
U2AF1-207ENST00000468039 CEP164Q9UPV0 1460 aa8.81□□□□□ -1
U2AF1-207ENST00000468039 ACTN4O43707 911 aaKnown RBP8.8□□□□□ -1
U2AF1-207ENST00000468039 MRC2Q9UBG0 1479 aa8.79□□□□□ -1
U2AF1-207ENST00000468039 KDM4AO75164 1064 aa8.79□□□□□ -1
U2AF1-207ENST00000468039 USP46P62068 366 aa8.79□□□□□ -1
U2AF1-207ENST00000468039 KRTAP4-8Q9BYQ9 185 aa8.79□□□□□ -1
U2AF1-207ENST00000468039 SENP2Q9HC62 589 aa8.79□□□□□ -1
U2AF1-207ENST00000468039 CUX2O14529 1486 aa8.78□□□□□ -1
U2AF1-207ENST00000468039 PCDHB3Q9Y5E6 796 aa8.78□□□□□ -1
U2AF1-207ENST00000468039 SNRPBP14678 240 aaKnown RBP8.77□□□□□ -1.01
U2AF1-207ENST00000468039 XP32Q5T750 250 aa8.77□□□□□ -1.01
U2AF1-207ENST00000468039 TRIM47Q96LD4 638 aa8.77□□□□□ -1.01
U2AF1-207ENST00000468039 RSPH6AQ9H0K4 717 aa8.77□□□□□ -1.01
U2AF1-207ENST00000468039 PRDM2Q13029 1718 aa8.77□□□□□ -1.01
U2AF1-207ENST00000468039 GMPRP36959 345 aa8.76□□□□□ -1.01
U2AF1-207ENST00000468039 ATP6V1AP38606 617 aa8.76□□□□□ -1.01
U2AF1-207ENST00000468039 KCNMA1Q12791 1236 aa8.76□□□□□ -1.01
U2AF1-207ENST00000468039 FAM117AQ9C073 453 aa8.76□□□□□ -1.01
U2AF1-207ENST00000468039 PKD2L1Q9P0L9 805 aa8.76□□□□□ -1.01
U2AF1-207ENST00000468039 WDR62O43379 1518 aa8.75□□□□□ -1.01
U2AF1-207ENST00000468039 URB2Q14146 1524 aaKnown RBP8.75□□□□□ -1.01
U2AF1-207ENST00000468039 FUT2Q10981 343 aa8.75□□□□□ -1.01
U2AF1-207ENST00000468039 IL27Q8NEV9 243 aa8.75□□□□□ -1.01
U2AF1-207ENST00000468039 SPIRE2Q8WWL2 714 aa8.75□□□□□ -1.01
U2AF1-207ENST00000468039 NR1I2O75469 434 aa8.74□□□□□ -1.01
U2AF1-207ENST00000468039 FOXC1Q12948 553 aa8.74□□□□□ -1.01
U2AF1-207ENST00000468039 IRF7Q92985 503 aa8.74□□□□□ -1.01
U2AF1-207ENST00000468039 TBC1D2Q9BYX2 928 aa8.74□□□□□ -1.01
U2AF1-207ENST00000468039 ATP1B4Q9UN42 357 aaPredicted RBP8.74□□□□□ -1.01
U2AF1-207ENST00000468039 ATP13A2Q9NQ11 1180 aa8.73□□□□□ -1.01
U2AF1-207ENST00000468039 TOR4AQ9NXH8 423 aa8.73□□□□□ -1.01
U2AF1-207ENST00000468039 PPEF1O14829 653 aaPredicted RBP8.72□□□□□ -1.01
U2AF1-207ENST00000468039 HOXA2O43364 376 aa8.72□□□□□ -1.01
U2AF1-207ENST00000468039 PUS10Q3MIT2 529 aaKnown RBP8.72□□□□□ -1.01
U2AF1-207ENST00000468039 KIFC2Q96AC6 838 aa8.72□□□□□ -1.01
U2AF1-207ENST00000468039 BLOC1S3Q6QNY0 202 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms