RNA–Protein interactions for RNA: ENST00000467898.3

LCA5-203, Transcript of LCA5, lebercilin, humanhuman

TSL 5 BASIC

Gene LCA5, Length 2,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-203ENST00000467898 ZFYVE16Q7Z3T8 1539 aa11.63□□□□□ -0.55
LCA5-203ENST00000467898 MSNP26038 577 aaKnown RBP11.62□□□□□ -0.55
LCA5-203ENST00000467898 BECN1Q14457 450 aa11.62□□□□□ -0.55
LCA5-203ENST00000467898 CGNQ9P2M7 1197 aaKnown RBP11.62□□□□□ -0.55
LCA5-203ENST00000467898 CCDC66A2RUB6 948 aa11.62□□□□□ -0.55
LCA5-203ENST00000467898 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
LCA5-203ENST00000467898 INO80Q9ULG1 1556 aaPredicted RBP11.62□□□□□ -0.55
LCA5-203ENST00000467898 NINLQ9Y2I6 1382 aa11.62□□□□□ -0.55
LCA5-203ENST00000467898 SLC4A3P48751 1232 aa11.61□□□□□ -0.55
LCA5-203ENST00000467898 EFCAB2Q5VUJ9 269 aa11.61□□□□□ -0.55
LCA5-203ENST00000467898 ZNF500O60304 480 aaPredicted RBP11.61□□□□□ -0.55
LCA5-203ENST00000467898 PLA2R1Q13018 1463 aa11.61□□□□□ -0.55
LCA5-203ENST00000467898 KDM5CP41229 1560 aa11.61□□□□□ -0.55
LCA5-203ENST00000467898 EIF4G2P78344 907 aaKnown RBP eCLIP11.61□□□□□ -0.55
LCA5-203ENST00000467898 CARD10Q9BWT7 1032 aa11.61□□□□□ -0.55
LCA5-203ENST00000467898 EFCC1Q9HA90 598 aa11.61□□□□□ -0.55
LCA5-203ENST00000467898 PPP1R9BQ96SB3 815 aa11.6□□□□□ -0.55
LCA5-203ENST00000467898 DEPDC5O75140 1603 aa11.6□□□□□ -0.55
LCA5-203ENST00000467898 RTEL1-TNFRSF6BF6WH68 1400 aa11.6□□□□□ -0.55
LCA5-203ENST00000467898 ASXL2Q76L83 1435 aa11.6□□□□□ -0.55
LCA5-203ENST00000467898 SASS6Q6UVJ0 657 aa11.59□□□□□ -0.55
LCA5-203ENST00000467898 E9PSI1 815 aa11.59□□□□□ -0.55
LCA5-203ENST00000467898 NBPF1Q3BBV0 1214 aa11.59□□□□□ -0.55
LCA5-203ENST00000467898 BCORL1Q5H9F3 1711 aa11.59□□□□□ -0.55
LCA5-203ENST00000467898 RALGAPBQ86X10 1494 aa11.58□□□□□ -0.55
LCA5-203ENST00000467898 MAPK8IP2Q13387 824 aaPredicted RBP11.58□□□□□ -0.56
LCA5-203ENST00000467898 NBPF20Q3BBV1 942 aa11.58□□□□□ -0.56
LCA5-203ENST00000467898 R3HCC1Q9Y3T6 440 aaKnown RBP11.58□□□□□ -0.56
LCA5-203ENST00000467898 FANCAO15360 1455 aa11.58□□□□□ -0.56
LCA5-203ENST00000467898 FAM161AQ3B820 660 aa11.58□□□□□ -0.56
LCA5-203ENST00000467898 OSCARQ8IYS5 282 aa11.58□□□□□ -0.56
LCA5-203ENST00000467898 TMC1Q8TDI8 760 aa11.58□□□□□ -0.56
LCA5-203ENST00000467898 ATP10AO60312 1499 aa11.57□□□□□ -0.56
LCA5-203ENST00000467898 TULP2O00295 520 aa11.57□□□□□ -0.56
LCA5-203ENST00000467898 CCDC7Q96M83 1385 aa11.56□□□□□ -0.56
LCA5-203ENST00000467898 SCAPERQ9BY12 1400 aa11.56□□□□□ -0.56
LCA5-203ENST00000467898 ATP7AQ04656 1500 aa11.56□□□□□ -0.56
LCA5-203ENST00000467898 CNTLNQ9NXG0 1405 aa11.56□□□□□ -0.56
LCA5-203ENST00000467898 E9PCH4 1651 aa11.56□□□□□ -0.56
LCA5-203ENST00000467898 CFAP65Q6ZU64 1925 aaKnown RBP11.56□□□□□ -0.56
LCA5-203ENST00000467898 MCM5P33992 734 aa11.56□□□□□ -0.56
LCA5-203ENST00000467898 KIF3AQ9Y496 699 aa11.56□□□□□ -0.56
LCA5-203ENST00000467898 TRPM1Q7Z4N2 1603 aa11.55□□□□□ -0.56
LCA5-203ENST00000467898 VWDEQ8N2E2 1590 aa11.55□□□□□ -0.56
LCA5-203ENST00000467898 ZBTB22O15209 634 aa11.55□□□□□ -0.56
LCA5-203ENST00000467898 SETQ01105 290 aaPredicted RBP11.55□□□□□ -0.56
LCA5-203ENST00000467898 TMED8Q6PL24 325 aaPredicted RBP11.55□□□□□ -0.56
LCA5-203ENST00000467898 EGFL6Q8IUX8 553 aa11.55□□□□□ -0.56
LCA5-203ENST00000467898 TIGD1Q96MW7 591 aa11.55□□□□□ -0.56
LCA5-203ENST00000467898 GABPB1Q06547 395 aaPredicted RBP11.54□□□□□ -0.56
LCA5-203ENST00000467898 EIF2AK4Q9P2K8 1649 aaKnown RBP11.54□□□□□ -0.56
LCA5-203ENST00000467898 NGEFQ8N5V2 710 aa11.54□□□□□ -0.56
LCA5-203ENST00000467898 ADGRL1O94910 1474 aa11.53□□□□□ -0.56
LCA5-203ENST00000467898 KCNJ4P48050 445 aa11.53□□□□□ -0.56
LCA5-203ENST00000467898 KTN1Q86UP2 1357 aaKnown RBP11.53□□□□□ -0.56
LCA5-203ENST00000467898 MROH1Q8NDA8 1641 aa11.53□□□□□ -0.56
LCA5-203ENST00000467898 ANTXR1Q9H6X2 564 aa11.53□□□□□ -0.56
LCA5-203ENST00000467898 KIDINS220Q9ULH0 1771 aa11.53□□□□□ -0.56
LCA5-203ENST00000467898 MCM4P33991 863 aa11.53□□□□□ -0.56
LCA5-203ENST00000467898 AFAP1Q8N556 730 aa11.53□□□□□ -0.56
LCA5-203ENST00000467898 SPAG9O60271 1321 aaKnown RBP11.52□□□□□ -0.56
LCA5-203ENST00000467898 RRP1P56182 461 aaKnown RBP11.52□□□□□ -0.57
LCA5-203ENST00000467898 A2MP01023 1474 aa11.52□□□□□ -0.57
LCA5-203ENST00000467898 CCDC144AA2RUR9 1427 aa11.52□□□□□ -0.57
LCA5-203ENST00000467898 USP47Q96K76 1375 aa11.52□□□□□ -0.57
LCA5-203ENST00000467898 HSP90AB3PQ58FF7 597 aa11.52□□□□□ -0.57
LCA5-203ENST00000467898 TET3O43151 1660 aa11.51□□□□□ -0.57
LCA5-203ENST00000467898 KIF7Q2M1P5 1343 aa11.51□□□□□ -0.57
LCA5-203ENST00000467898 DDX11L8A8MPP1 907 aa11.51□□□□□ -0.57
LCA5-203ENST00000467898 TPRNQ4KMQ1 711 aa11.51□□□□□ -0.57
LCA5-203ENST00000467898 AEBP1Q8IUX7 1158 aa11.51□□□□□ -0.57
LCA5-203ENST00000467898 NOL7Q9UMY1 257 aaKnown RBP11.51□□□□□ -0.57
LCA5-203ENST00000467898 CFAP74Q9C0B2 1584 aa11.51□□□□□ -0.57
LCA5-203ENST00000467898 SPHKAPQ2M3C7 1700 aa11.51□□□□□ -0.57
LCA5-203ENST00000467898 GTF2F1P35269 517 aaKnown RBP eCLIP11.51□□□□□ -0.57
LCA5-203ENST00000467898 PRAG1Q86YV5 1406 aa11.51□□□□□ -0.57
LCA5-203ENST00000467898 LAMC1P11047 1609 aa11.51□□□□□ -0.57
LCA5-203ENST00000467898 PRDM15P57071 1507 aaPredicted RBP11.51□□□□□ -0.57
LCA5-203ENST00000467898 TRAK2O60296 914 aa11.5□□□□□ -0.57
LCA5-203ENST00000467898 CBX1P83916 185 aa11.5□□□□□ -0.57
LCA5-203ENST00000467898 C8orf34Q49A92 452 aa11.5□□□□□ -0.57
LCA5-203ENST00000467898 FAM43BQ6ZT52 329 aaPredicted RBP11.5□□□□□ -0.57
LCA5-203ENST00000467898 CALCOCO1Q9P1Z2 691 aa11.5□□□□□ -0.57
LCA5-203ENST00000467898 CTR9Q6PD62 1173 aa11.5□□□□□ -0.57
LCA5-203ENST00000467898 ZNF771Q7L3S4 317 aaPredicted RBP11.5□□□□□ -0.57
LCA5-203ENST00000467898 CEP152O94986 1710 aa11.5□□□□□ -0.57
LCA5-203ENST00000467898 MYRIPQ8NFW9 859 aa11.5□□□□□ -0.57
LCA5-203ENST00000467898 FEZ1Q99689 392 aa11.5□□□□□ -0.57
LCA5-203ENST00000467898 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.5□□□□□ -0.57
LCA5-203ENST00000467898 TRPM2O94759 1503 aa11.49□□□□□ -0.57
LCA5-203ENST00000467898 MFAP1P55081 439 aaKnown RBP11.49□□□□□ -0.57
LCA5-203ENST00000467898 CREBRFQ8IUR6 639 aa11.49□□□□□ -0.57
LCA5-203ENST00000467898 LMOD3Q0VAK6 560 aa11.49□□□□□ -0.57
LCA5-203ENST00000467898 CERS3Q8IU89 383 aa11.49□□□□□ -0.57
LCA5-203ENST00000467898 PRIMPOLQ96LW4 560 aa11.49□□□□□ -0.57
LCA5-203ENST00000467898 MRS2Q9HD23 443 aa11.49□□□□□ -0.57
LCA5-203ENST00000467898 IBTKQ9P2D0 1353 aaPredicted RBP11.49□□□□□ -0.57
LCA5-203ENST00000467898 HMGN5P82970 282 aaKnown RBP11.48□□□□□ -0.57
LCA5-203ENST00000467898 PTPRTO14522 1441 aa11.48□□□□□ -0.57
LCA5-203ENST00000467898 RNF17Q9BXT8 1623 aaKnown RBP11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms