RNA–Protein interactions for RNA: ENST00000467854.1

CNTNAP3B-204, Transcript of contactin associated protein like 3B, humanhuman

TSL 3

Gene CNTNAP3B, Length 1,238 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-204ENST00000467854 USP47Q96K76 1375 aa31.76■■■□□ 2.67
CNTNAP3B-204ENST00000467854 C14orf37Q86TY3 774 aa31.75■■■□□ 2.67
CNTNAP3B-204ENST00000467854 FBXO41Q8TF61 875 aa31.75■■■□□ 2.67
CNTNAP3B-204ENST00000467854 CENPJQ9HC77 1338 aaPredicted RBP31.74■■■□□ 2.67
CNTNAP3B-204ENST00000467854 IQSEC2Q5JU85 1478 aa31.73■■■□□ 2.67
CNTNAP3B-204ENST00000467854 ADGRB2O60241 1585 aa31.73■■■□□ 2.67
CNTNAP3B-204ENST00000467854 CERKQ8TCT0 537 aa31.72■■■□□ 2.67
CNTNAP3B-204ENST00000467854 MSH6P52701 1360 aa31.7■■■□□ 2.67
CNTNAP3B-204ENST00000467854 CDC42BPGQ6DT37 1551 aa31.7■■■□□ 2.67
CNTNAP3B-204ENST00000467854 MINK1Q8N4C8 1332 aaPredicted RBP31.68■■■□□ 2.66
CNTNAP3B-204ENST00000467854 DCCP43146 1447 aa31.66■■■□□ 2.66
CNTNAP3B-204ENST00000467854 HIRIP3Q9BW71 556 aaPredicted RBP31.64■■■□□ 2.66
CNTNAP3B-204ENST00000467854 C19orf44Q9H6X5 657 aa31.64■■■□□ 2.66
CNTNAP3B-204ENST00000467854 ST20-MTHFSA0A0A6YYL1 179 aa31.63■■■□□ 2.65
CNTNAP3B-204ENST00000467854 FMN2Q9NZ56 1722 aa31.63■■■□□ 2.65
CNTNAP3B-204ENST00000467854 SBNO2Q9Y2G9 1366 aa31.61■■■□□ 2.65
CNTNAP3B-204ENST00000467854 EIF4G2P78344 907 aaKnown RBP eCLIP31.61■■■□□ 2.65
CNTNAP3B-204ENST00000467854 TULP4Q9NRJ4 1543 aa31.6■■■□□ 2.65
CNTNAP3B-204ENST00000467854 HSPA5P11021 654 aaKnown RBP31.58■■■□□ 2.65
CNTNAP3B-204ENST00000467854 ATF3P18847 181 aa31.57■■■□□ 2.64
CNTNAP3B-204ENST00000467854 CADPS2Q86UW7 1296 aa31.55■■■□□ 2.64
CNTNAP3B-204ENST00000467854 TESK2Q96S53 571 aa31.54■■■□□ 2.64
CNTNAP3B-204ENST00000467854 MST1RQ04912 1400 aa31.54■■■□□ 2.64
CNTNAP3B-204ENST00000467854 WASLO00401 505 aaPredicted RBP31.52■■■□□ 2.64
CNTNAP3B-204ENST00000467854 USP32Q8NFA0 1604 aa31.52■■■□□ 2.64
CNTNAP3B-204ENST00000467854 UBAP1LF5GYI3 381 aa31.49■■■□□ 2.63
CNTNAP3B-204ENST00000467854 EVC2Q86UK5 1308 aa31.49■■■□□ 2.63
CNTNAP3B-204ENST00000467854 NUTM2FA1L443 756 aa31.48■■■□□ 2.63
CNTNAP3B-204ENST00000467854 CDK19Q9BWU1 502 aa31.48■■■□□ 2.63
CNTNAP3B-204ENST00000467854 RGPD8O14715 1765 aaPredicted RBP31.48■■■□□ 2.63
CNTNAP3B-204ENST00000467854 C1orf167Q5SNV9 1468 aa31.47■■■□□ 2.63
CNTNAP3B-204ENST00000467854 ANKARQ7Z5J8 1434 aa31.47■■■□□ 2.63
CNTNAP3B-204ENST00000467854 ATP7BP35670 1465 aa31.46■■■□□ 2.63
CNTNAP3B-204ENST00000467854 TOM1O60784 492 aa31.46■■■□□ 2.63
CNTNAP3B-204ENST00000467854 DISP3Q9P2K9 1392 aa31.45■■■□□ 2.63
CNTNAP3B-204ENST00000467854 ITSN1Q15811 1721 aa31.45■■■□□ 2.63
CNTNAP3B-204ENST00000467854 TOPAZ1Q8N9V7 1692 aa31.44■■■□□ 2.62
CNTNAP3B-204ENST00000467854 SRPK2P78362 688 aaKnown RBP31.44■■■□□ 2.62
CNTNAP3B-204ENST00000467854 CABP2Q9NPB3 220 aa31.43■■■□□ 2.62
CNTNAP3B-204ENST00000467854 SLAIN2Q9P270 581 aa31.43■■■□□ 2.62
CNTNAP3B-204ENST00000467854 PRR36Q9H6K5 1346 aa31.43■■■□□ 2.62
CNTNAP3B-204ENST00000467854 ROBO1Q9Y6N7 1651 aa31.42■■■□□ 2.62
CNTNAP3B-204ENST00000467854 SLC24A1O60721 1099 aa31.41■■■□□ 2.62
CNTNAP3B-204ENST00000467854 TMF1P82094 1093 aa31.41■■■□□ 2.62
CNTNAP3B-204ENST00000467854 KIF1AQ12756 1690 aa31.38■■■□□ 2.61
CNTNAP3B-204ENST00000467854 PIP4K2BP78356 416 aa31.37■■■□□ 2.61
CNTNAP3B-204ENST00000467854 NUDT16Q96DE0 195 aaKnown RBP31.37■■■□□ 2.61
CNTNAP3B-204ENST00000467854 SCAF1Q9H7N4 1312 aaKnown RBP31.36■■■□□ 2.61
CNTNAP3B-204ENST00000467854 ATAD2Q6PL18 1390 aa31.34■■■□□ 2.61
CNTNAP3B-204ENST00000467854 ESCO1Q5FWF5 840 aa31.34■■■□□ 2.61
CNTNAP3B-204ENST00000467854 ORAI2Q96SN7 254 aa31.34■■■□□ 2.61
CNTNAP3B-204ENST00000467854 BRINP3Q76B58 766 aa31.33■■■□□ 2.61
CNTNAP3B-204ENST00000467854 PPIP5K1Q6PFW1 1433 aa31.32■■■□□ 2.6
CNTNAP3B-204ENST00000467854 CDCA8Q53HL2 280 aa31.3■■■□□ 2.6
CNTNAP3B-204ENST00000467854 CCDC61Q9Y6R9 512 aa31.3■■■□□ 2.6
CNTNAP3B-204ENST00000467854 NHSL1Q5SYE7 1610 aa31.3■■■□□ 2.6
CNTNAP3B-204ENST00000467854 MYOM1P52179 1685 aa31.29■■■□□ 2.6
CNTNAP3B-204ENST00000467854 PUS7Q96PZ0 661 aaKnown RBP31.29■■■□□ 2.6
CNTNAP3B-204ENST00000467854 PHF8Q9UPP1 1060 aa31.28■■■□□ 2.6
CNTNAP3B-204ENST00000467854 C11orf95C9JLR9 678 aaPredicted RBP31.27■■■□□ 2.6
CNTNAP3B-204ENST00000467854 PMFBP1Q8TBY8 1022 aa31.26■■■□□ 2.59
CNTNAP3B-204ENST00000467854 AHDC1Q5TGY3 1603 aaPredicted RBP31.25■■■□□ 2.59
CNTNAP3B-204ENST00000467854 POLR3GLQ9BT43 218 aa31.25■■■□□ 2.59
CNTNAP3B-204ENST00000467854 CABP1Q9NZU7 370 aa31.22■■■□□ 2.59
CNTNAP3B-204ENST00000467854 KIF7Q2M1P5 1343 aa31.22■■■□□ 2.59
CNTNAP3B-204ENST00000467854 PHLPP1O60346 1717 aa31.21■■■□□ 2.59
CNTNAP3B-204ENST00000467854 TMC1Q8TDI8 760 aa31.21■■■□□ 2.59
CNTNAP3B-204ENST00000467854 AKAP12Q02952 1782 aa31.2■■■□□ 2.59
CNTNAP3B-204ENST00000467854 NINLQ9Y2I6 1382 aa31.2■■■□□ 2.59
CNTNAP3B-204ENST00000467854 PLEKHG3A1L390 1219 aa31.2■■■□□ 2.59
CNTNAP3B-204ENST00000467854 DDX17Q92841 729 aaKnown RBP31.2■■■□□ 2.59
CNTNAP3B-204ENST00000467854 POLR3AO14802 1390 aaPredicted RBP31.18■■■□□ 2.58
CNTNAP3B-204ENST00000467854 CCDC7Q96M83 1385 aa31.18■■■□□ 2.58
CNTNAP3B-204ENST00000467854 FOXO3O43524 673 aa31.18■■■□□ 2.58
CNTNAP3B-204ENST00000467854 NGDNQ8NEJ9 315 aaKnown RBP31.17■■■□□ 2.58
CNTNAP3B-204ENST00000467854 ACEP12821 1306 aa31.17■■■□□ 2.58
CNTNAP3B-204ENST00000467854 NPHP3Q7Z494 1330 aa31.17■■■□□ 2.58
CNTNAP3B-204ENST00000467854 PXDNQ92626 1479 aa31.16■■■□□ 2.58
CNTNAP3B-204ENST00000467854 CD163L1Q9NR16 1453 aa31.16■■■□□ 2.58
CNTNAP3B-204ENST00000467854 SLC12A5Q9H2X9 1139 aa31.16■■■□□ 2.58
CNTNAP3B-204ENST00000467854 WASHC2AQ641Q2 1341 aa31.16■■■□□ 2.58
CNTNAP3B-204ENST00000467854 COL16A1Q07092 1604 aaPredicted RBP31.16■■■□□ 2.58
CNTNAP3B-204ENST00000467854 MON2Q7Z3U7 1717 aa31.15■■■□□ 2.58
CNTNAP3B-204ENST00000467854 XPCQ01831 940 aaPredicted RBP31.14■■■□□ 2.58
CNTNAP3B-204ENST00000467854 TRPM3Q9HCF6 1732 aaPredicted RBP31.13■■■□□ 2.57
CNTNAP3B-204ENST00000467854 CPSF1Q10570 1443 aaKnown RBP31.12■■■□□ 2.57
CNTNAP3B-204ENST00000467854 NRKQ7Z2Y5 1582 aa31.12■■■□□ 2.57
CNTNAP3B-204ENST00000467854 A0A1W2PP64 1363 aa31.11■■■□□ 2.57
CNTNAP3B-204ENST00000467854 USP6P35125 1406 aa31.1■■■□□ 2.57
CNTNAP3B-204ENST00000467854 ANKRD36BQ8N2N9 1353 aa31.09■■■□□ 2.57
CNTNAP3B-204ENST00000467854 SOS2Q07890 1332 aaPredicted RBP31.09■■■□□ 2.57
CNTNAP3B-204ENST00000467854 PSME1Q06323 249 aa31.09■■■□□ 2.57
CNTNAP3B-204ENST00000467854 KRT28Q7Z3Y7 464 aa31.08■■■□□ 2.57
CNTNAP3B-204ENST00000467854 TERF2IPQ9NYB0 399 aa31.08■■■□□ 2.57
CNTNAP3B-204ENST00000467854 KTN1Q86UP2 1357 aaKnown RBP31.07■■■□□ 2.56
CNTNAP3B-204ENST00000467854 HSPA1LP34931 641 aa31.07■■■□□ 2.56
CNTNAP3B-204ENST00000467854 HDGFL2Q7Z4V5 671 aaPredicted RBP31.07■■■□□ 2.56
CNTNAP3B-204ENST00000467854 ZNF692Q9BU19 519 aaPredicted RBP31.03■■■□□ 2.56
CNTNAP3B-204ENST00000467854 TNS3Q68CZ2 1445 aa31.03■■■□□ 2.56
CNTNAP3B-204ENST00000467854 SBNO1A3KN83 1393 aa31.03■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms