RNA–Protein interactions for RNA: ENST00000467837.5

NCSTN-211, Transcript of nicastrin, humanhuman

TSL 5

Gene NCSTN, Length 726 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-211ENST00000467837 FMN2Q9NZ56 1722 aa23.19■■□□□ 1.3
NCSTN-211ENST00000467837 QRICH2Q9H0J4 1663 aa23.19■■□□□ 1.3
NCSTN-211ENST00000467837 UBAP1LF5GYI3 381 aa23.18■■□□□ 1.3
NCSTN-211ENST00000467837 C14orf37Q86TY3 774 aa23.18■■□□□ 1.3
NCSTN-211ENST00000467837 FBXO41Q8TF61 875 aa23.18■■□□□ 1.3
NCSTN-211ENST00000467837 MST1RQ04912 1400 aa23.17■■□□□ 1.3
NCSTN-211ENST00000467837 TOM1O60784 492 aa23.15■■□□□ 1.3
NCSTN-211ENST00000467837 ROBO1Q9Y6N7 1651 aa23.15■■□□□ 1.3
NCSTN-211ENST00000467837 CADPS2Q86UW7 1296 aa23.14■■□□□ 1.29
NCSTN-211ENST00000467837 POGKQ9P215 609 aa23.12■■□□□ 1.29
NCSTN-211ENST00000467837 EIF3AQ14152 1382 aaKnown RBP23.12■■□□□ 1.29
NCSTN-211ENST00000467837 USP32Q8NFA0 1604 aa23.11■■□□□ 1.29
NCSTN-211ENST00000467837 ATF3P18847 181 aa23.11■■□□□ 1.29
NCSTN-211ENST00000467837 SAFB2Q14151 953 aaKnown RBP eCLIP23.11■■□□□ 1.29
NCSTN-211ENST00000467837 CARD11Q9BXL7 1154 aa23.11■■□□□ 1.29
NCSTN-211ENST00000467837 C1orf167Q5SNV9 1468 aa23.1■■□□□ 1.29
NCSTN-211ENST00000467837 CENPJQ9HC77 1338 aaPredicted RBP23.09■■□□□ 1.29
NCSTN-211ENST00000467837 SLAIN2Q9P270 581 aa23.08■■□□□ 1.29
NCSTN-211ENST00000467837 TULP4Q9NRJ4 1543 aa23.08■■□□□ 1.28
NCSTN-211ENST00000467837 SBNO2Q9Y2G9 1366 aa23.07■■□□□ 1.28
NCSTN-211ENST00000467837 MINK1Q8N4C8 1332 aaPredicted RBP23.07■■□□□ 1.28
NCSTN-211ENST00000467837 RGPD8O14715 1765 aaPredicted RBP23.06■■□□□ 1.28
NCSTN-211ENST00000467837 NHSL1Q5SYE7 1610 aa23.05■■□□□ 1.28
NCSTN-211ENST00000467837 TOPAZ1Q8N9V7 1692 aa23.05■■□□□ 1.28
NCSTN-211ENST00000467837 AHDC1Q5TGY3 1603 aaPredicted RBP23.04■■□□□ 1.28
NCSTN-211ENST00000467837 PIP4K2BP78356 416 aa23.04■■□□□ 1.28
NCSTN-211ENST00000467837 HIRIP3Q9BW71 556 aaPredicted RBP23.04■■□□□ 1.28
NCSTN-211ENST00000467837 ANKARQ7Z5J8 1434 aa23.04■■□□□ 1.28
NCSTN-211ENST00000467837 ATP7BP35670 1465 aa23.04■■□□□ 1.28
NCSTN-211ENST00000467837 USP47Q96K76 1375 aa23.03■■□□□ 1.28
NCSTN-211ENST00000467837 KIF1AQ12756 1690 aa23.02■■□□□ 1.28
NCSTN-211ENST00000467837 ITSN1Q15811 1721 aa23.02■■□□□ 1.28
NCSTN-211ENST00000467837 ILDR1Q86SU0 546 aaPredicted RBP23.01■■□□□ 1.27
NCSTN-211ENST00000467837 WASLO00401 505 aaPredicted RBP23■■□□□ 1.27
NCSTN-211ENST00000467837 BRINP3Q76B58 766 aa23■■□□□ 1.27
NCSTN-211ENST00000467837 SCAF1Q9H7N4 1312 aaKnown RBP23■■□□□ 1.27
NCSTN-211ENST00000467837 COL16A1Q07092 1604 aaPredicted RBP22.99■■□□□ 1.27
NCSTN-211ENST00000467837 PHLPP1O60346 1717 aa22.98■■□□□ 1.27
NCSTN-211ENST00000467837 PRR36Q9H6K5 1346 aa22.98■■□□□ 1.27
NCSTN-211ENST00000467837 TESK2Q96S53 571 aa22.95■■□□□ 1.26
NCSTN-211ENST00000467837 ST20-MTHFSA0A0A6YYL1 179 aa22.94■■□□□ 1.26
NCSTN-211ENST00000467837 NUTM2FA1L443 756 aa22.94■■□□□ 1.26
NCSTN-211ENST00000467837 ORAI2Q96SN7 254 aa22.94■■□□□ 1.26
NCSTN-211ENST00000467837 CDK19Q9BWU1 502 aa22.93■■□□□ 1.26
NCSTN-211ENST00000467837 HSPA1LP34931 641 aa22.91■■□□□ 1.26
NCSTN-211ENST00000467837 PXDNQ92626 1479 aa22.91■■□□□ 1.26
NCSTN-211ENST00000467837 EVC2Q86UK5 1308 aa22.9■■□□□ 1.26
NCSTN-211ENST00000467837 ESCO1Q5FWF5 840 aa22.89■■□□□ 1.25
NCSTN-211ENST00000467837 NUDT16Q96DE0 195 aaKnown RBP22.88■■□□□ 1.25
NCSTN-211ENST00000467837 CABP2Q9NPB3 220 aa22.87■■□□□ 1.25
NCSTN-211ENST00000467837 TRPM3Q9HCF6 1732 aaPredicted RBP22.86■■□□□ 1.25
NCSTN-211ENST00000467837 PHF8Q9UPP1 1060 aa22.86■■□□□ 1.25
NCSTN-211ENST00000467837 DISP3Q9P2K9 1392 aa22.86■■□□□ 1.25
NCSTN-211ENST00000467837 SHPRHQ149N8 1683 aa22.85■■□□□ 1.25
NCSTN-211ENST00000467837 SRPK2P78362 688 aaKnown RBP22.85■■□□□ 1.25
NCSTN-211ENST00000467837 DDX17Q92841 729 aaKnown RBP22.85■■□□□ 1.25
NCSTN-211ENST00000467837 SOS2Q07890 1332 aaPredicted RBP22.84■■□□□ 1.25
NCSTN-211ENST00000467837 PPIP5K1Q6PFW1 1433 aa22.84■■□□□ 1.25
NCSTN-211ENST00000467837 ATAD2Q6PL18 1390 aa22.84■■□□□ 1.25
NCSTN-211ENST00000467837 NPHP3Q7Z494 1330 aa22.83■■□□□ 1.25
NCSTN-211ENST00000467837 EIF4G2P78344 907 aaKnown RBP eCLIP22.83■■□□□ 1.25
NCSTN-211ENST00000467837 CCDC61Q9Y6R9 512 aa22.83■■□□□ 1.25
NCSTN-211ENST00000467837 POLR3AO14802 1390 aaPredicted RBP22.83■■□□□ 1.25
NCSTN-211ENST00000467837 AKAP12Q02952 1782 aa22.82■■□□□ 1.24
NCSTN-211ENST00000467837 HSPA5P11021 654 aaKnown RBP22.82■■□□□ 1.24
NCSTN-211ENST00000467837 MYOM1P52179 1685 aa22.81■■□□□ 1.24
NCSTN-211ENST00000467837 PLEKHG3A1L390 1219 aa22.8■■□□□ 1.24
NCSTN-211ENST00000467837 FOXO3O43524 673 aa22.8■■□□□ 1.24
NCSTN-211ENST00000467837 SLC24A1O60721 1099 aa22.8■■□□□ 1.24
NCSTN-211ENST00000467837 PMFBP1Q8TBY8 1022 aa22.8■■□□□ 1.24
NCSTN-211ENST00000467837 PUS7Q96PZ0 661 aaKnown RBP22.8■■□□□ 1.24
NCSTN-211ENST00000467837 COL22A1Q8NFW1 1626 aaPredicted RBP22.79■■□□□ 1.24
NCSTN-211ENST00000467837 ALS2Q96Q42 1657 aa22.79■■□□□ 1.24
NCSTN-211ENST00000467837 NRKQ7Z2Y5 1582 aa22.78■■□□□ 1.24
NCSTN-211ENST00000467837 MON2Q7Z3U7 1717 aa22.78■■□□□ 1.24
NCSTN-211ENST00000467837 TMF1P82094 1093 aa22.77■■□□□ 1.24
NCSTN-211ENST00000467837 CD163L1Q9NR16 1453 aa22.77■■□□□ 1.24
NCSTN-211ENST00000467837 JCADQ9P266 1359 aa22.76■■□□□ 1.23
NCSTN-211ENST00000467837 TNS3Q68CZ2 1445 aa22.75■■□□□ 1.23
NCSTN-211ENST00000467837 XPCQ01831 940 aaPredicted RBP22.75■■□□□ 1.23
NCSTN-211ENST00000467837 SBNO1A3KN83 1393 aa22.75■■□□□ 1.23
NCSTN-211ENST00000467837 PNPLA6Q8IY17 1366 aa22.75■■□□□ 1.23
NCSTN-211ENST00000467837 CPSF1Q10570 1443 aaKnown RBP22.74■■□□□ 1.23
NCSTN-211ENST00000467837 CABP1Q9NZU7 370 aa22.74■■□□□ 1.23
NCSTN-211ENST00000467837 ACEP12821 1306 aa22.74■■□□□ 1.23
NCSTN-211ENST00000467837 NINLQ9Y2I6 1382 aa22.74■■□□□ 1.23
NCSTN-211ENST00000467837 ABCA3Q99758 1704 aa22.72■■□□□ 1.23
NCSTN-211ENST00000467837 KRT28Q7Z3Y7 464 aa22.72■■□□□ 1.23
NCSTN-211ENST00000467837 NGDNQ8NEJ9 315 aaKnown RBP22.72■■□□□ 1.23
NCSTN-211ENST00000467837 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
NCSTN-211ENST00000467837 USP6P35125 1406 aa22.72■■□□□ 1.23
NCSTN-211ENST00000467837 CRYBG1Q9Y4K1 1723 aa22.71■■□□□ 1.23
NCSTN-211ENST00000467837 SPATA31A3Q5VYP0 1347 aa22.71■■□□□ 1.23
NCSTN-211ENST00000467837 SSH2Q76I76 1423 aa22.71■■□□□ 1.23
NCSTN-211ENST00000467837 MED1Q15648 1581 aaPredicted RBP22.71■■□□□ 1.23
NCSTN-211ENST00000467837 ZEB1P37275 1124 aaPredicted RBP22.7■■□□□ 1.22
NCSTN-211ENST00000467837 PSME1Q06323 249 aa22.69■■□□□ 1.22
NCSTN-211ENST00000467837 CDCA8Q53HL2 280 aa22.69■■□□□ 1.22
NCSTN-211ENST00000467837 LRP6O75581 1613 aa22.68■■□□□ 1.22
NCSTN-211ENST00000467837 BRD4O60885 1362 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms