RNA–Protein interactions for RNA: ENST00000467762.2

RIF1-209, Transcript of replication timing regulatory factor 1, humanhuman

TSL 4

Gene RIF1, Length 545 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-209ENST00000467762 ZFRQ96KR1 1074 aaKnown RBP7.37□□□□□ -1.23
RIF1-209ENST00000467762 NESP48681 1621 aa7.37□□□□□ -1.23
RIF1-209ENST00000467762 ARHGEF11O15085 1522 aa7.37□□□□□ -1.23
RIF1-209ENST00000467762 TCOF1Q13428 1488 aaKnown RBP7.36□□□□□ -1.23
RIF1-209ENST00000467762 MIA2Q96PC5 1412 aa7.36□□□□□ -1.23
RIF1-209ENST00000467762 PBRM1Q86U86 1689 aa7.36□□□□□ -1.23
RIF1-209ENST00000467762 SMAPO00193 183 aa7.36□□□□□ -1.23
RIF1-209ENST00000467762 SEMA3EO15041 775 aa7.36□□□□□ -1.23
RIF1-209ENST00000467762 ANKK1Q8NFD2 765 aa7.36□□□□□ -1.23
RIF1-209ENST00000467762 NPDC1Q9NQX5 325 aaPredicted RBP7.36□□□□□ -1.23
RIF1-209ENST00000467762 PLA2G2EQ9NZK7 142 aa7.36□□□□□ -1.23
RIF1-209ENST00000467762 ATP1B4Q9UN42 357 aaPredicted RBP7.36□□□□□ -1.23
RIF1-209ENST00000467762 UGGT2Q9NYU1 1516 aa7.36□□□□□ -1.23
RIF1-209ENST00000467762 NCOA2Q15596 1464 aa7.36□□□□□ -1.23
RIF1-209ENST00000467762 PTPN23Q9H3S7 1636 aa7.35□□□□□ -1.23
RIF1-209ENST00000467762 FAM98CQ17RN3 349 aaKnown RBP7.35□□□□□ -1.23
RIF1-209ENST00000467762 CERKQ8TCT0 537 aa7.35□□□□□ -1.23
RIF1-209ENST00000467762 IQGAP2Q13576 1575 aa7.34□□□□□ -1.23
RIF1-209ENST00000467762 PACS2Q86VP3 889 aa7.34□□□□□ -1.23
RIF1-209ENST00000467762 GCC2Q8IWJ2 1684 aa7.34□□□□□ -1.23
RIF1-209ENST00000467762 TONSLQ96HA7 1378 aa7.33□□□□□ -1.24
RIF1-209ENST00000467762 LRRIQ1Q96JM4 1722 aa7.33□□□□□ -1.24
RIF1-209ENST00000467762 MRC2Q9UBG0 1479 aa7.33□□□□□ -1.24
RIF1-209ENST00000467762 SOWAHBA6NEL2 793 aa7.33□□□□□ -1.24
RIF1-209ENST00000467762 PADI6Q6TGC4 694 aa7.33□□□□□ -1.24
RIF1-209ENST00000467762 NAIPQ13075 1403 aa7.33□□□□□ -1.24
RIF1-209ENST00000467762 TDRD9Q8NDG6 1382 aaKnown RBP7.33□□□□□ -1.24
RIF1-209ENST00000467762 PNMA3Q9UL41 463 aa7.32□□□□□ -1.24
RIF1-209ENST00000467762 ADAMTS12P58397 1594 aa7.32□□□□□ -1.24
RIF1-209ENST00000467762 IFT140Q96RY7 1462 aa7.31□□□□□ -1.24
RIF1-209ENST00000467762 NBPF26B4DH59 902 aa7.31□□□□□ -1.24
RIF1-209ENST00000467762 ANP32CO43423 234 aa7.31□□□□□ -1.24
RIF1-209ENST00000467762 TTC13Q8NBP0 860 aa7.31□□□□□ -1.24
RIF1-209ENST00000467762 TATDN2Q93075 761 aa7.31□□□□□ -1.24
RIF1-209ENST00000467762 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
RIF1-209ENST00000467762 CDK11AQ9UQ88 783 aaPredicted RBP7.31□□□□□ -1.24
RIF1-209ENST00000467762 ROCK1Q13464 1354 aa7.31□□□□□ -1.24
RIF1-209ENST00000467762 NUDT18Q6ZVK8 323 aa7.3□□□□□ -1.24
RIF1-209ENST00000467762 LRCH3Q96II8 777 aa7.3□□□□□ -1.24
RIF1-209ENST00000467762 WBP1LQ9NX94 342 aa7.3□□□□□ -1.24
RIF1-209ENST00000467762 EPRSP07814 1512 aaKnown RBP7.3□□□□□ -1.24
RIF1-209ENST00000467762 KIAA0586Q9BVV6 1533 aa7.29□□□□□ -1.24
RIF1-209ENST00000467762 PTGDRQ13258 359 aa7.29□□□□□ -1.24
RIF1-209ENST00000467762 SIN3AQ96ST3 1273 aa7.29□□□□□ -1.24
RIF1-209ENST00000467762 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.29□□□□□ -1.24
RIF1-209ENST00000467762 WDR62O43379 1518 aa7.28□□□□□ -1.24
RIF1-209ENST00000467762 TESPA1A2RU30 521 aaPredicted RBP7.28□□□□□ -1.24
RIF1-209ENST00000467762 EIF5BO60841 1220 aaKnown RBP7.28□□□□□ -1.24
RIF1-209ENST00000467762 SAMD7Q7Z3H4 446 aa7.28□□□□□ -1.24
RIF1-209ENST00000467762 ZC3H15Q8WU90 426 aaKnown RBP7.28□□□□□ -1.24
RIF1-209ENST00000467762 SLC24A3Q9HC58 644 aa7.28□□□□□ -1.24
RIF1-209ENST00000467762 HPS5Q9UPZ3 1129 aa7.28□□□□□ -1.24
RIF1-209ENST00000467762 SUPT16HQ9Y5B9 1047 aaKnown RBP7.28□□□□□ -1.24
RIF1-209ENST00000467762 PTPRKQ15262 1439 aa7.27□□□□□ -1.24
RIF1-209ENST00000467762 NUTM2FA1L443 756 aa7.27□□□□□ -1.25
RIF1-209ENST00000467762 HMGB1P09429 215 aaKnown RBP7.27□□□□□ -1.25
RIF1-209ENST00000467762 DDX10Q13206 875 aaKnown RBP7.27□□□□□ -1.25
RIF1-209ENST00000467762 RBM26Q5T8P6 1007 aaKnown RBP7.26□□□□□ -1.25
RIF1-209ENST00000467762 TSR3Q9UJK0 312 aaKnown RBP7.26□□□□□ -1.25
RIF1-209ENST00000467762 NEFLP07196 543 aa7.25□□□□□ -1.25
RIF1-209ENST00000467762 ERICH6BQ5W0A0 696 aa7.25□□□□□ -1.25
RIF1-209ENST00000467762 DNMT1P26358 1616 aaKnown RBP7.25□□□□□ -1.25
RIF1-209ENST00000467762 ITSN2Q9NZM3 1697 aa7.25□□□□□ -1.25
RIF1-209ENST00000467762 MAGI1Q96QZ7 1491 aaPredicted RBP7.24□□□□□ -1.25
RIF1-209ENST00000467762 KIAA0556O60303 1618 aa7.24□□□□□ -1.25
RIF1-209ENST00000467762 RAPGEF6Q8TEU7 1601 aa7.24□□□□□ -1.25
RIF1-209ENST00000467762 MAGI3Q5TCQ9 1506 aa7.24□□□□□ -1.25
RIF1-209ENST00000467762 FAM161AQ3B820 660 aa7.24□□□□□ -1.25
RIF1-209ENST00000467762 EYA1Q99502 592 aa7.24□□□□□ -1.25
RIF1-209ENST00000467762 C1orf115Q9H7X2 142 aa7.24□□□□□ -1.25
RIF1-209ENST00000467762 RNF40O75150 1001 aa7.23□□□□□ -1.25
RIF1-209ENST00000467762 EIF4G2P78344 907 aaKnown RBP eCLIP7.23□□□□□ -1.25
RIF1-209ENST00000467762 SWT1Q5T5J6 900 aaKnown RBP7.23□□□□□ -1.25
RIF1-209ENST00000467762 MPHOSPH9Q99550 1183 aa7.23□□□□□ -1.25
RIF1-209ENST00000467762 POLR1AO95602 1720 aaPredicted RBP7.23□□□□□ -1.25
RIF1-209ENST00000467762 ADCY10Q96PN6 1610 aa7.23□□□□□ -1.25
RIF1-209ENST00000467762 ADGBQ8N7X0 1667 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 DAPK1P53355 1430 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 CARMIL2Q6F5E8 1435 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 APBB1O00213 710 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 GPR37O15354 613 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 FCHSD2O94868 740 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 ITGBL1O95965 494 aaPredicted RBP7.22□□□□□ -1.25
RIF1-209ENST00000467762 NYAP1Q6ZVC0 841 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 ADGRG1Q9Y653 693 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 GRIN2AQ12879 1464 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 ARID4BQ4LE39 1312 aaPredicted RBP7.22□□□□□ -1.25
RIF1-209ENST00000467762 DISP1Q96F81 1524 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 KDM5BQ9UGL1 1544 aa7.22□□□□□ -1.25
RIF1-209ENST00000467762 PPP4CP60510 307 aa7.21□□□□□ -1.26
RIF1-209ENST00000467762 IFFO2Q5TF58 517 aa7.21□□□□□ -1.26
RIF1-209ENST00000467762 KCTD17Q8N5Z5 321 aa7.21□□□□□ -1.26
RIF1-209ENST00000467762 NECTIN2Q92692 538 aa7.21□□□□□ -1.26
RIF1-209ENST00000467762 TRIM52Q96A61 297 aa7.21□□□□□ -1.26
RIF1-209ENST00000467762 RPRD2Q5VT52 1461 aaKnown RBP7.21□□□□□ -1.26
RIF1-209ENST00000467762 TROQ12816 1431 aaPredicted RBP7.2□□□□□ -1.26
RIF1-209ENST00000467762 ADGRL2O95490 1459 aa7.2□□□□□ -1.26
RIF1-209ENST00000467762 ANKRD30BQ9BXX2 1392 aa7.2□□□□□ -1.26
RIF1-209ENST00000467762 ABCC5O15440 1437 aa7.19□□□□□ -1.26
RIF1-209ENST00000467762 SYNJ2O15056 1496 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms