RNA–Protein interactions for RNA: ENST00000467366.1

PTPRE-206, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3

Gene PTPRE, Length 338 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-206ENST00000467366 RPRD2Q5VT52 1461 aaKnown RBP10.21□□□□□ -0.78
PTPRE-206ENST00000467366 ABCC5O15440 1437 aa10.2□□□□□ -0.78
PTPRE-206ENST00000467366 SLIT2O94813 1529 aa10.2□□□□□ -0.78
PTPRE-206ENST00000467366 RGPD1P0DJD0 1748 aa10.19□□□□□ -0.78
PTPRE-206ENST00000467366 CAMTA1Q9Y6Y1 1673 aa10.19□□□□□ -0.78
PTPRE-206ENST00000467366 EN1Q05925 392 aaPredicted RBP10.19□□□□□ -0.78
PTPRE-206ENST00000467366 UNC5CLQ8IV45 518 aa10.19□□□□□ -0.78
PTPRE-206ENST00000467366 KRT27Q7Z3Y8 459 aa10.18□□□□□ -0.78
PTPRE-206ENST00000467366 PTPN23Q9H3S7 1636 aa10.18□□□□□ -0.78
PTPRE-206ENST00000467366 METP08581 1390 aa10.17□□□□□ -0.78
PTPRE-206ENST00000467366 TNS1Q9HBL0 1735 aaKnown RBP10.17□□□□□ -0.78
PTPRE-206ENST00000467366 PXDNQ92626 1479 aa10.17□□□□□ -0.78
PTPRE-206ENST00000467366 ONECUT3O60422 494 aaPredicted RBP10.15□□□□□ -0.78
PTPRE-206ENST00000467366 APLP2Q06481 763 aa10.15□□□□□ -0.78
PTPRE-206ENST00000467366 ZNF784Q8NCA9 323 aaPredicted RBP10.15□□□□□ -0.78
PTPRE-206ENST00000467366 E9PCH4 1651 aa10.15□□□□□ -0.79
PTPRE-206ENST00000467366 PLCH1Q4KWH8 1693 aa10.15□□□□□ -0.79
PTPRE-206ENST00000467366 DAPK1P53355 1430 aa10.15□□□□□ -0.79
PTPRE-206ENST00000467366 USP32Q8NFA0 1604 aa10.14□□□□□ -0.79
PTPRE-206ENST00000467366 XPCQ01831 940 aaPredicted RBP10.13□□□□□ -0.79
PTPRE-206ENST00000467366 EZH2Q15910 746 aaKnown RBP10.13□□□□□ -0.79
PTPRE-206ENST00000467366 CHIC2Q9UKJ5 165 aa10.13□□□□□ -0.79
PTPRE-206ENST00000467366 IQGAP3Q86VI3 1631 aa10.13□□□□□ -0.79
PTPRE-206ENST00000467366 C1QTNF8P60827 252 aa10.12□□□□□ -0.79
PTPRE-206ENST00000467366 VPS72Q15906 364 aa10.12□□□□□ -0.79
PTPRE-206ENST00000467366 FAM182BQ5T319 152 aa10.12□□□□□ -0.79
PTPRE-206ENST00000467366 DISP2A7MBM2 1401 aa10.12□□□□□ -0.79
PTPRE-206ENST00000467366 NWD2Q9ULI1 1742 aa10.12□□□□□ -0.79
PTPRE-206ENST00000467366 ANKRD30AQ9BXX3 1397 aa10.12□□□□□ -0.79
PTPRE-206ENST00000467366 NPHP3Q7Z494 1330 aa10.11□□□□□ -0.79
PTPRE-206ENST00000467366 DCAF8L1A6NGE4 600 aa10.11□□□□□ -0.79
PTPRE-206ENST00000467366 CCDC9Q9Y3X0 531 aaKnown RBP10.11□□□□□ -0.79
PTPRE-206ENST00000467366 RREB1Q92766 1687 aa10.1□□□□□ -0.79
PTPRE-206ENST00000467366 KANK4Q5T7N3 995 aaPredicted RBP10.1□□□□□ -0.79
PTPRE-206ENST00000467366 NUP188Q5SRE5 1749 aa10.1□□□□□ -0.79
PTPRE-206ENST00000467366 ADGRL2O95490 1459 aa10.1□□□□□ -0.79
PTPRE-206ENST00000467366 A0A0G2JS52 829 aa10.09□□□□□ -0.79
PTPRE-206ENST00000467366 FOXO3O43524 673 aa10.09□□□□□ -0.79
PTPRE-206ENST00000467366 CAMKK2Q96RR4 588 aa10.09□□□□□ -0.79
PTPRE-206ENST00000467366 NRAPQ86VF7 1730 aa10.08□□□□□ -0.8
PTPRE-206ENST00000467366 ESCO1Q5FWF5 840 aa10.08□□□□□ -0.8
PTPRE-206ENST00000467366 PPP1R1BQ9UD71 204 aaPredicted RBP10.08□□□□□ -0.8
PTPRE-206ENST00000467366 ROBO2Q9HCK4 1378 aa10.08□□□□□ -0.8
PTPRE-206ENST00000467366 NINLQ9Y2I6 1382 aa10.08□□□□□ -0.8
PTPRE-206ENST00000467366 ABCA3Q99758 1704 aa10.07□□□□□ -0.8
PTPRE-206ENST00000467366 FAM98CQ17RN3 349 aaKnown RBP10.07□□□□□ -0.8
PTPRE-206ENST00000467366 ADGRB2O60241 1585 aa10.06□□□□□ -0.8
PTPRE-206ENST00000467366 SPATA31A3Q5VYP0 1347 aa10.06□□□□□ -0.8
PTPRE-206ENST00000467366 CDC42BPGQ6DT37 1551 aa10.05□□□□□ -0.8
PTPRE-206ENST00000467366 SPON1Q9HCB6 807 aa10.05□□□□□ -0.8
PTPRE-206ENST00000467366 ANKRD50Q9ULJ7 1429 aa10.05□□□□□ -0.8
PTPRE-206ENST00000467366 NEXMIFQ5QGS0 1516 aa10.04□□□□□ -0.8
PTPRE-206ENST00000467366 THSD7AQ9UPZ6 1657 aa10.04□□□□□ -0.8
PTPRE-206ENST00000467366 KCNQ2O43526 872 aa10.04□□□□□ -0.8
PTPRE-206ENST00000467366 CABLES1Q8TDN4 633 aa10.04□□□□□ -0.8
PTPRE-206ENST00000467366 PLEKHG5O94827 1062 aa10.03□□□□□ -0.8
PTPRE-206ENST00000467366 PRKCSHP14314 528 aaPredicted RBP10.03□□□□□ -0.8
PTPRE-206ENST00000467366 ZNF326Q5BKZ1 582 aaKnown RBP10.03□□□□□ -0.8
PTPRE-206ENST00000467366 NRKQ7Z2Y5 1582 aa10.03□□□□□ -0.8
PTPRE-206ENST00000467366 UTRNP46939 3433 aa10.03□□□□□ -0.8
PTPRE-206ENST00000467366 CHD4Q14839 1912 aa10.03□□□□□ -0.8
PTPRE-206ENST00000467366 LRPPRCP42704 1394 aaKnown RBP10.02□□□□□ -0.8
PTPRE-206ENST00000467366 TRIM37O94972 964 aa10.02□□□□□ -0.81
PTPRE-206ENST00000467366 HAP1P54257 671 aaPredicted RBP10.02□□□□□ -0.81
PTPRE-206ENST00000467366 PARD3Q8TEW0 1356 aa10.01□□□□□ -0.81
PTPRE-206ENST00000467366 HFM1A2PYH4 1435 aa10.01□□□□□ -0.81
PTPRE-206ENST00000467366 PRAG1Q86YV5 1406 aa10.01□□□□□ -0.81
PTPRE-206ENST00000467366 NUTM2FA1L443 756 aa10.01□□□□□ -0.81
PTPRE-206ENST00000467366 APBA3O96018 575 aa10.01□□□□□ -0.81
PTPRE-206ENST00000467366 MYOM1P52179 1685 aa10.01□□□□□ -0.81
PTPRE-206ENST00000467366 CEP350Q5VT06 3117 aa10□□□□□ -0.81
PTPRE-206ENST00000467366 KIF1AQ12756 1690 aa10□□□□□ -0.81
PTPRE-206ENST00000467366 FAM83GA6ND36 823 aa10□□□□□ -0.81
PTPRE-206ENST00000467366 NBPF8Q3BBV2 869 aa10□□□□□ -0.81
PTPRE-206ENST00000467366 NBPF14Q5TI25 921 aa10□□□□□ -0.81
PTPRE-206ENST00000467366 TNS3Q68CZ2 1445 aa9.99□□□□□ -0.81
PTPRE-206ENST00000467366 CASZ1Q86V15 1759 aa9.99□□□□□ -0.81
PTPRE-206ENST00000467366 KRT28Q7Z3Y7 464 aa9.99□□□□□ -0.81
PTPRE-206ENST00000467366 FMN2Q9NZ56 1722 aa9.99□□□□□ -0.81
PTPRE-206ENST00000467366 CCDC144AA2RUR9 1427 aa9.99□□□□□ -0.81
PTPRE-206ENST00000467366 NAIPQ13075 1403 aa9.99□□□□□ -0.81
PTPRE-206ENST00000467366 VPS8Q8N3P4 1428 aa9.99□□□□□ -0.81
PTPRE-206ENST00000467366 CLTCL1P53675 1640 aa9.98□□□□□ -0.81
PTPRE-206ENST00000467366 BTG4Q9NY30 223 aa9.98□□□□□ -0.81
PTPRE-206ENST00000467366 RGPD8O14715 1765 aaPredicted RBP9.98□□□□□ -0.81
PTPRE-206ENST00000467366 COL14A1Q05707 1796 aaKnown RBP9.98□□□□□ -0.81
PTPRE-206ENST00000467366 SPATA31A5Q5VU36 1347 aa9.97□□□□□ -0.81
PTPRE-206ENST00000467366 SPATA31A7Q8IWB4 1347 aa9.97□□□□□ -0.81
PTPRE-206ENST00000467366 GIGYF1O75420 1035 aaPredicted RBP9.96□□□□□ -0.82
PTPRE-206ENST00000467366 FAM196AQ6ZSG2 479 aa9.96□□□□□ -0.82
PTPRE-206ENST00000467366 KIF1BO60333 1816 aa9.95□□□□□ -0.82
PTPRE-206ENST00000467366 LMOD2Q6P5Q4 547 aa9.94□□□□□ -0.82
PTPRE-206ENST00000467366 PDGFDQ9GZP0 370 aaPredicted RBP9.94□□□□□ -0.82
PTPRE-206ENST00000467366 PTGER2P43116 358 aa9.93□□□□□ -0.82
PTPRE-206ENST00000467366 SYT17Q9BSW7 474 aa9.93□□□□□ -0.82
PTPRE-206ENST00000467366 SHANK3Q9BYB0 1731 aa9.93□□□□□ -0.82
PTPRE-206ENST00000467366 SBNO1A3KN83 1393 aa9.92□□□□□ -0.82
PTPRE-206ENST00000467366 NUP155O75694 1391 aa9.92□□□□□ -0.82
PTPRE-206ENST00000467366 PSME1Q06323 249 aa9.92□□□□□ -0.82
PTPRE-206ENST00000467366 WAPLQ7Z5K2 1190 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms