RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 REREQ9P2R6 1566 aa15.13■□□□□ 0.01
HPS1-208ENST00000467246 PPP6R1Q9UPN7 881 aa15.13■□□□□ 0.01
HPS1-208ENST00000467246 EXOC6Q8TAG9 804 aa15.12■□□□□ 0.01
HPS1-208ENST00000467246 ZNF521Q96K83 1311 aa15.12■□□□□ 0.01
HPS1-208ENST00000467246 PUS7Q96PZ0 661 aaKnown RBP15.12■□□□□ 0.01
HPS1-208ENST00000467246 APAF1O14727 1248 aa15.11■□□□□ 0.01
HPS1-208ENST00000467246 CLTCQ00610 1675 aaKnown RBP15.11■□□□□ 0.01
HPS1-208ENST00000467246 PLIN1O60240 522 aa15.11■□□□□ 0.01
HPS1-208ENST00000467246 PRAM1Q96QH2 718 aa15.1■□□□□ 0.01
HPS1-208ENST00000467246 DUSP27Q5VZP5 1158 aa15.1■□□□□ 0.01
HPS1-208ENST00000467246 CGNL1Q0VF96 1302 aa15.09■□□□□ 0.01
HPS1-208ENST00000467246 MINK1Q8N4C8 1332 aaPredicted RBP15.09■□□□□ 0.01
HPS1-208ENST00000467246 YTHDC2Q9H6S0 1430 aaKnown RBP15.09■□□□□ 0.01
HPS1-208ENST00000467246 POLR3AO14802 1390 aaPredicted RBP15.09■□□□□ 0.01
HPS1-208ENST00000467246 SRPK2P78362 688 aaKnown RBP15.09■□□□□ 0.01
HPS1-208ENST00000467246 GOLGA2Q08379 1002 aa15.09■□□□□ 0.01
HPS1-208ENST00000467246 PTPRMP28827 1452 aa15.09■□□□□ 0.01
HPS1-208ENST00000467246 ANKRD36BQ8N2N9 1353 aa15.09■□□□□ 0.01
HPS1-208ENST00000467246 POGKQ9P215 609 aa15.08■□□□□ 0.01
HPS1-208ENST00000467246 KIF13AQ9H1H9 1805 aa15.08■□□□□ 0
HPS1-208ENST00000467246 ALKQ9UM73 1620 aa15.07■□□□□ 0
HPS1-208ENST00000467246 A2ML1A8K2U0 1454 aa15.07■□□□□ 0
HPS1-208ENST00000467246 MTHFSP49914 203 aa15.06■□□□□ 0
HPS1-208ENST00000467246 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
HPS1-208ENST00000467246 SPATA31D1Q6ZQQ2 1576 aa15.06■□□□□ 0
HPS1-208ENST00000467246 SLFN5Q08AF3 891 aa15.06■□□□□ 0
HPS1-208ENST00000467246 ARHGEF40Q8TER5 1519 aa15.05■□□□□ -0
HPS1-208ENST00000467246 A0A1W2PP64 1363 aa15.04■□□□□ -0
HPS1-208ENST00000467246 USP32Q8NFA0 1604 aa15.04■□□□□ -0
HPS1-208ENST00000467246 RIMS2Q9UQ26 1411 aa15.04■□□□□ -0
HPS1-208ENST00000467246 ZMYM3Q14202 1370 aa15.04■□□□□ -0
HPS1-208ENST00000467246 ESF1Q9H501 851 aaKnown RBP15.03■□□□□ -0
HPS1-208ENST00000467246 DMRT2Q9Y5R5 561 aa15.03■□□□□ -0
HPS1-208ENST00000467246 TRMT2AQ8IZ69 625 aaKnown RBP15.03■□□□□ -0
HPS1-208ENST00000467246 C20orf194Q5TEA3 1177 aa15.02□□□□□ -0.01
HPS1-208ENST00000467246 WAPLQ7Z5K2 1190 aa15.02□□□□□ -0.01
HPS1-208ENST00000467246 CDK19Q9BWU1 502 aa15.02□□□□□ -0.01
HPS1-208ENST00000467246 CRBNQ96SW2 442 aa15.02□□□□□ -0.01
HPS1-208ENST00000467246 SHPRHQ149N8 1683 aa15.01□□□□□ -0.01
HPS1-208ENST00000467246 NSD2O96028 1365 aa15.01□□□□□ -0.01
HPS1-208ENST00000467246 ATAD2Q6PL18 1390 aa15.01□□□□□ -0.01
HPS1-208ENST00000467246 GGNBP2Q9H3C7 697 aa15.01□□□□□ -0.01
HPS1-208ENST00000467246 NINLQ9Y2I6 1382 aa15.01□□□□□ -0.01
HPS1-208ENST00000467246 ABCC11Q96J66 1382 aa15□□□□□ -0.01
HPS1-208ENST00000467246 NEUROD2Q15784 382 aa14.99□□□□□ -0.01
HPS1-208ENST00000467246 TERF2IPQ9NYB0 399 aa14.99□□□□□ -0.01
HPS1-208ENST00000467246 RRP7AQ9Y3A4 280 aaKnown RBP14.99□□□□□ -0.01
HPS1-208ENST00000467246 CD163L1Q9NR16 1453 aa14.99□□□□□ -0.01
HPS1-208ENST00000467246 WWC1Q8IX03 1113 aa14.99□□□□□ -0.01
HPS1-208ENST00000467246 CFAP53Q96M91 514 aa14.99□□□□□ -0.01
HPS1-208ENST00000467246 CABP1Q9NZU7 370 aa14.99□□□□□ -0.01
HPS1-208ENST00000467246 E9PSI1 815 aa14.98□□□□□ -0.01
HPS1-208ENST00000467246 RUNDC1Q96C34 613 aa14.98□□□□□ -0.01
HPS1-208ENST00000467246 FYB1O15117 783 aa14.98□□□□□ -0.01
HPS1-208ENST00000467246 NGEFQ8N5V2 710 aa14.98□□□□□ -0.01
HPS1-208ENST00000467246 TCP11L2Q8N4U5 519 aa14.97□□□□□ -0.01
HPS1-208ENST00000467246 NKTRP30414 1462 aaKnown RBP14.96□□□□□ -0.01
HPS1-208ENST00000467246 METP08581 1390 aa14.96□□□□□ -0.01
HPS1-208ENST00000467246 FANCIQ9NVI1 1328 aa14.96□□□□□ -0.02
HPS1-208ENST00000467246 HDGFL2Q7Z4V5 671 aaPredicted RBP14.95□□□□□ -0.02
HPS1-208ENST00000467246 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.95□□□□□ -0.02
HPS1-208ENST00000467246 U2AF1L5P0DN76 240 aaPredicted RBP14.95□□□□□ -0.02
HPS1-208ENST00000467246 U2AF1Q01081 240 aaKnown RBP eCLIP14.95□□□□□ -0.02
HPS1-208ENST00000467246 SETD1AO15047 1707 aaKnown RBP14.95□□□□□ -0.02
HPS1-208ENST00000467246 BCAR3O75815 825 aa14.94□□□□□ -0.02
HPS1-208ENST00000467246 DLC1Q96QB1 1528 aa14.94□□□□□ -0.02
HPS1-208ENST00000467246 NLRP1Q9C000 1473 aa14.94□□□□□ -0.02
HPS1-208ENST00000467246 TNRQ92752 1358 aa14.94□□□□□ -0.02
HPS1-208ENST00000467246 TXNDC2Q86VQ3 553 aa14.94□□□□□ -0.02
HPS1-208ENST00000467246 ERICH6Q7L0X2 663 aa14.93□□□□□ -0.02
HPS1-208ENST00000467246 NRXN3Q9Y4C0 1643 aa14.93□□□□□ -0.02
HPS1-208ENST00000467246 IQSEC2Q5JU85 1478 aa14.93□□□□□ -0.02
HPS1-208ENST00000467246 PHF23Q9BUL5 403 aaPredicted RBP14.92□□□□□ -0.02
HPS1-208ENST00000467246 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.92□□□□□ -0.02
HPS1-208ENST00000467246 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.91□□□□□ -0.02
HPS1-208ENST00000467246 U2SURPO15042 1029 aaKnown RBP14.9□□□□□ -0.02
HPS1-208ENST00000467246 CEBPAP49715 358 aaPredicted RBP14.9□□□□□ -0.02
HPS1-208ENST00000467246 MED14O60244 1454 aa14.9□□□□□ -0.02
HPS1-208ENST00000467246 WASLO00401 505 aaPredicted RBP14.9□□□□□ -0.02
HPS1-208ENST00000467246 HDGFP51858 240 aaKnown RBP14.9□□□□□ -0.02
HPS1-208ENST00000467246 TMEM2Q9UHN6 1383 aa14.89□□□□□ -0.03
HPS1-208ENST00000467246 FBLN1P23142 703 aa14.89□□□□□ -0.03
HPS1-208ENST00000467246 PRKCSHP14314 528 aaPredicted RBP14.89□□□□□ -0.03
HPS1-208ENST00000467246 SKAP1Q86WV1 359 aa14.89□□□□□ -0.03
HPS1-208ENST00000467246 NCKAP5LQ9HCH0 1330 aa14.88□□□□□ -0.03
HPS1-208ENST00000467246 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
HPS1-208ENST00000467246 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
HPS1-208ENST00000467246 WDR63Q8IWG1 891 aa14.88□□□□□ -0.03
HPS1-208ENST00000467246 PLEKHF1Q96S99 279 aa14.87□□□□□ -0.03
HPS1-208ENST00000467246 LTKP29376 864 aa14.86□□□□□ -0.03
HPS1-208ENST00000467246 NBR1Q14596 966 aa14.86□□□□□ -0.03
HPS1-208ENST00000467246 ANKRD26Q9UPS8 1709 aa14.86□□□□□ -0.03
HPS1-208ENST00000467246 ATP7BP35670 1465 aa14.86□□□□□ -0.03
HPS1-208ENST00000467246 TCERG1O14776 1098 aaKnown RBP14.85□□□□□ -0.03
HPS1-208ENST00000467246 PLPPR3Q6T4P5 718 aa14.85□□□□□ -0.03
HPS1-208ENST00000467246 NUDT16Q96DE0 195 aaKnown RBP14.85□□□□□ -0.03
HPS1-208ENST00000467246 UBR1Q8IWV7 1749 aa14.85□□□□□ -0.03
HPS1-208ENST00000467246 PPIP5K1Q6PFW1 1433 aa14.85□□□□□ -0.03
HPS1-208ENST00000467246 KDM2BQ8NHM5 1336 aa14.85□□□□□ -0.03
HPS1-208ENST00000467246 PPM1GO15355 546 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms