RNA–Protein interactions for RNA: ENST00000467065.1

UBXN4-205, Transcript of UBX domain protein 4, humanhuman

TSL 5

Gene UBXN4, Length 334 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-205ENST00000467065 CCDC144AA2RUR9 1427 aa9.73□□□□□ -0.85
UBXN4-205ENST00000467065 SETD5Q9C0A6 1442 aa9.73□□□□□ -0.85
UBXN4-205ENST00000467065 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
UBXN4-205ENST00000467065 NHSL1Q5SYE7 1610 aa9.72□□□□□ -0.85
UBXN4-205ENST00000467065 AHDC1Q5TGY3 1603 aaPredicted RBP9.71□□□□□ -0.85
UBXN4-205ENST00000467065 SHPRHQ149N8 1683 aa9.71□□□□□ -0.85
UBXN4-205ENST00000467065 KNDC1Q76NI1 1749 aa9.71□□□□□ -0.85
UBXN4-205ENST00000467065 MPHOSPH9Q99550 1183 aa9.71□□□□□ -0.86
UBXN4-205ENST00000467065 SLAIN2Q9P270 581 aa9.71□□□□□ -0.86
UBXN4-205ENST00000467065 RAB3GAP2Q9H2M9 1393 aa9.7□□□□□ -0.86
UBXN4-205ENST00000467065 SPATA31E1Q6ZUB1 1445 aa9.7□□□□□ -0.86
UBXN4-205ENST00000467065 DCCP43146 1447 aa9.69□□□□□ -0.86
UBXN4-205ENST00000467065 ASXL1Q8IXJ9 1541 aa9.69□□□□□ -0.86
UBXN4-205ENST00000467065 ADGRL3Q9HAR2 1447 aa9.69□□□□□ -0.86
UBXN4-205ENST00000467065 LAMC1P11047 1609 aa9.68□□□□□ -0.86
UBXN4-205ENST00000467065 MST1RQ04912 1400 aa9.68□□□□□ -0.86
UBXN4-205ENST00000467065 PTCH1Q13635 1447 aa9.68□□□□□ -0.86
UBXN4-205ENST00000467065 VGFO15240 615 aaPredicted RBP9.68□□□□□ -0.86
UBXN4-205ENST00000467065 ATF3P18847 181 aa9.68□□□□□ -0.86
UBXN4-205ENST00000467065 C19orf44Q9H6X5 657 aa9.68□□□□□ -0.86
UBXN4-205ENST00000467065 RPGRIP1LQ68CZ1 1315 aa9.67□□□□□ -0.86
UBXN4-205ENST00000467065 ADGRF5Q8IZF2 1346 aa9.67□□□□□ -0.86
UBXN4-205ENST00000467065 SOCS7O14512 581 aa9.67□□□□□ -0.86
UBXN4-205ENST00000467065 PRKAR2AP13861 404 aaKnown RBP9.67□□□□□ -0.86
UBXN4-205ENST00000467065 RGL3Q3MIN7 710 aa9.67□□□□□ -0.86
UBXN4-205ENST00000467065 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
UBXN4-205ENST00000467065 PRAG1Q86YV5 1406 aa9.66□□□□□ -0.86
UBXN4-205ENST00000467065 ROBO2Q9HCK4 1378 aa9.66□□□□□ -0.86
UBXN4-205ENST00000467065 RGPD8O14715 1765 aaPredicted RBP9.66□□□□□ -0.86
UBXN4-205ENST00000467065 LRP6O75581 1613 aa9.65□□□□□ -0.86
UBXN4-205ENST00000467065 CDC42BPGQ6DT37 1551 aa9.65□□□□□ -0.86
UBXN4-205ENST00000467065 FMN2Q9NZ56 1722 aa9.65□□□□□ -0.87
UBXN4-205ENST00000467065 PIK3C2GO75747 1445 aa9.65□□□□□ -0.87
UBXN4-205ENST00000467065 ANKRD30BQ9BXX2 1392 aa9.64□□□□□ -0.87
UBXN4-205ENST00000467065 JCADQ9P266 1359 aa9.64□□□□□ -0.87
UBXN4-205ENST00000467065 C19orf67A6NJJ6 358 aa9.64□□□□□ -0.87
UBXN4-205ENST00000467065 MKRN4PQ13434 485 aaPredicted RBP9.64□□□□□ -0.87
UBXN4-205ENST00000467065 BRINP3Q76B58 766 aa9.64□□□□□ -0.87
UBXN4-205ENST00000467065 SPDYE1Q8NFV5 336 aaPredicted RBP9.64□□□□□ -0.87
UBXN4-205ENST00000467065 MYOM2P54296 1465 aa9.64□□□□□ -0.87
UBXN4-205ENST00000467065 C1orf167Q5SNV9 1468 aa9.62□□□□□ -0.87
UBXN4-205ENST00000467065 NRXN1Q9ULB1 1477 aa9.62□□□□□ -0.87
UBXN4-205ENST00000467065 RGS17Q9UGC6 210 aaPredicted RBP9.62□□□□□ -0.87
UBXN4-205ENST00000467065 SSUH2Q9Y2M2 353 aa9.62□□□□□ -0.87
UBXN4-205ENST00000467065 HRCP23327 699 aa9.61□□□□□ -0.87
UBXN4-205ENST00000467065 DDX17Q92841 729 aaKnown RBP9.61□□□□□ -0.87
UBXN4-205ENST00000467065 STK26Q9P289 416 aa9.61□□□□□ -0.87
UBXN4-205ENST00000467065 CLEC11AQ9Y240 323 aa9.61□□□□□ -0.87
UBXN4-205ENST00000467065 TECPR2O15040 1411 aa9.61□□□□□ -0.87
UBXN4-205ENST00000467065 LRPPRCP42704 1394 aaKnown RBP9.61□□□□□ -0.87
UBXN4-205ENST00000467065 MARF1Q9Y4F3 1742 aaKnown RBP9.6□□□□□ -0.87
UBXN4-205ENST00000467065 YTHDC2Q9H6S0 1430 aaKnown RBP9.6□□□□□ -0.87
UBXN4-205ENST00000467065 TMEM132EQ6IEE7 984 aa9.6□□□□□ -0.87
UBXN4-205ENST00000467065 PLEKHH1Q9ULM0 1364 aa9.6□□□□□ -0.87
UBXN4-205ENST00000467065 KIF1AQ12756 1690 aa9.59□□□□□ -0.87
UBXN4-205ENST00000467065 ARHGEF28Q8N1W1 1705 aaKnown RBP9.59□□□□□ -0.87
UBXN4-205ENST00000467065 SPATA31A6Q5VVP1 1343 aa9.58□□□□□ -0.88
UBXN4-205ENST00000467065 COL22A1Q8NFW1 1626 aaPredicted RBP9.58□□□□□ -0.88
UBXN4-205ENST00000467065 WAPLQ7Z5K2 1190 aa9.58□□□□□ -0.88
UBXN4-205ENST00000467065 ADGRB1O14514 1584 aa9.58□□□□□ -0.88
UBXN4-205ENST00000467065 NUTM2BA6NNL0 878 aaPredicted RBP9.57□□□□□ -0.88
UBXN4-205ENST00000467065 NUTM2EB1AL46 878 aaPredicted RBP9.57□□□□□ -0.88
UBXN4-205ENST00000467065 CFAP70Q5T0N1 1121 aa9.57□□□□□ -0.88
UBXN4-205ENST00000467065 MEX3CQ5U5Q3 659 aaKnown RBP9.57□□□□□ -0.88
UBXN4-205ENST00000467065 POTEAQ6S8J7 498 aa9.57□□□□□ -0.88
UBXN4-205ENST00000467065 NUTM2AQ8IVF1 878 aaPredicted RBP9.57□□□□□ -0.88
UBXN4-205ENST00000467065 CCER1Q8TC90 406 aaPredicted RBP9.57□□□□□ -0.88
UBXN4-205ENST00000467065 ORAI2Q96SN7 254 aa9.57□□□□□ -0.88
UBXN4-205ENST00000467065 ABCC11Q96J66 1382 aa9.57□□□□□ -0.88
UBXN4-205ENST00000467065 USP32Q8NFA0 1604 aa9.56□□□□□ -0.88
UBXN4-205ENST00000467065 ADGRB2O60241 1585 aa9.56□□□□□ -0.88
UBXN4-205ENST00000467065 PNPLA6Q8IY17 1366 aa9.56□□□□□ -0.88
UBXN4-205ENST00000467065 GABBR2O75899 941 aa9.56□□□□□ -0.88
UBXN4-205ENST00000467065 ZNF692Q9BU19 519 aaPredicted RBP9.56□□□□□ -0.88
UBXN4-205ENST00000467065 DLC1Q96QB1 1528 aa9.56□□□□□ -0.88
UBXN4-205ENST00000467065 PXDNQ92626 1479 aa9.55□□□□□ -0.88
UBXN4-205ENST00000467065 NUTM2FA1L443 756 aa9.55□□□□□ -0.88
UBXN4-205ENST00000467065 C14orf93Q9H972 538 aaKnown RBP9.55□□□□□ -0.88
UBXN4-205ENST00000467065 ABCA3Q99758 1704 aa9.55□□□□□ -0.88
UBXN4-205ENST00000467065 KIAA1210Q9ULL0 1709 aa9.55□□□□□ -0.88
UBXN4-205ENST00000467065 DHX57Q6P158 1386 aaKnown RBP9.54□□□□□ -0.88
UBXN4-205ENST00000467065 LRRC59Q96AG4 307 aaKnown RBP9.54□□□□□ -0.88
UBXN4-205ENST00000467065 KDM2AQ9Y2K7 1162 aa9.54□□□□□ -0.88
UBXN4-205ENST00000467065 ITSN1Q15811 1721 aa9.53□□□□□ -0.88
UBXN4-205ENST00000467065 SAFB2Q14151 953 aaKnown RBP eCLIP9.53□□□□□ -0.88
UBXN4-205ENST00000467065 ESCO1Q5FWF5 840 aa9.53□□□□□ -0.88
UBXN4-205ENST00000467065 DCAF11Q8TEB1 546 aa9.53□□□□□ -0.88
UBXN4-205ENST00000467065 SOS2Q07890 1332 aaPredicted RBP9.53□□□□□ -0.88
UBXN4-205ENST00000467065 XPCQ01831 940 aaPredicted RBP9.52□□□□□ -0.89
UBXN4-205ENST00000467065 PRAM1Q96QH2 718 aa9.52□□□□□ -0.89
UBXN4-205ENST00000467065 TRPM3Q9HCF6 1732 aaPredicted RBP9.51□□□□□ -0.89
UBXN4-205ENST00000467065 AFF2P51816 1311 aa9.51□□□□□ -0.89
UBXN4-205ENST00000467065 NPHP3Q7Z494 1330 aa9.51□□□□□ -0.89
UBXN4-205ENST00000467065 FOXO3O43524 673 aa9.5□□□□□ -0.89
UBXN4-205ENST00000467065 C8orf37Q96NL8 207 aa9.5□□□□□ -0.89
UBXN4-205ENST00000467065 PLCH1Q4KWH8 1693 aa9.49□□□□□ -0.89
UBXN4-205ENST00000467065 TOPAZ1Q8N9V7 1692 aa9.49□□□□□ -0.89
UBXN4-205ENST00000467065 QRICH2Q9H0J4 1663 aa9.49□□□□□ -0.89
UBXN4-205ENST00000467065 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.49□□□□□ -0.89
UBXN4-205ENST00000467065 ADAMTS2O95450 1211 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms