RNA–Protein interactions for RNA: ENST00000466704.1

CALD1-214, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 903 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-214ENST00000466704 C6orf229H3BNL8 230 aa8.66□□□□□ -1.02
CALD1-214ENST00000466704 GJA5P36382 358 aa8.66□□□□□ -1.02
CALD1-214ENST00000466704 LIMD1Q9UGP4 676 aa8.66□□□□□ -1.02
CALD1-214ENST00000466704 RNF19BQ6ZMZ0 732 aa8.65□□□□□ -1.02
CALD1-214ENST00000466704 PCMTD1Q96MG8 357 aaPredicted RBP8.65□□□□□ -1.02
CALD1-214ENST00000466704 SPSB2Q99619 263 aa8.65□□□□□ -1.02
CALD1-214ENST00000466704 PCDHGC3Q9UN70 934 aa8.65□□□□□ -1.02
CALD1-214ENST00000466704 ADH1BP00325 375 aa8.64□□□□□ -1.03
CALD1-214ENST00000466704 GOPCQ9HD26 462 aa8.64□□□□□ -1.03
CALD1-214ENST00000466704 SALL2Q9Y467 1007 aaPredicted RBP8.64□□□□□ -1.03
CALD1-214ENST00000466704 MTMR2Q13614 643 aa8.63□□□□□ -1.03
CALD1-214ENST00000466704 BRICD5Q6PL45 260 aa8.63□□□□□ -1.03
CALD1-214ENST00000466704 NKX2-3Q8TAU0 364 aa8.63□□□□□ -1.03
CALD1-214ENST00000466704 SYMPKQ92797 1274 aaKnown RBP8.63□□□□□ -1.03
CALD1-214ENST00000466704 ZBTB3Q9H5J0 574 aa8.63□□□□□ -1.03
CALD1-214ENST00000466704 PCDHB15Q9Y5E8 787 aa8.63□□□□□ -1.03
CALD1-214ENST00000466704 NUTM2BA6NNL0 878 aaPredicted RBP8.62□□□□□ -1.03
CALD1-214ENST00000466704 NUTM2EB1AL46 878 aaPredicted RBP8.62□□□□□ -1.03
CALD1-214ENST00000466704 NUTM2DQ5VT03 806 aaPredicted RBP8.62□□□□□ -1.03
CALD1-214ENST00000466704 NUTM2AQ8IVF1 878 aaPredicted RBP8.62□□□□□ -1.03
CALD1-214ENST00000466704 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
CALD1-214ENST00000466704 TUSC1Q2TAM9 212 aa8.61□□□□□ -1.03
CALD1-214ENST00000466704 RETREG3Q86VR2 466 aa8.61□□□□□ -1.03
CALD1-214ENST00000466704 PROCA1Q8NCQ7 364 aaPredicted RBP8.61□□□□□ -1.03
CALD1-214ENST00000466704 USB1Q9BQ65 265 aaKnown RBP8.61□□□□□ -1.03
CALD1-214ENST00000466704 SPDYE5A6NIY4 337 aa8.6□□□□□ -1.03
CALD1-214ENST00000466704 HRCP23327 699 aa8.6□□□□□ -1.03
CALD1-214ENST00000466704 TMEM132AQ24JP5 1023 aa8.6□□□□□ -1.03
CALD1-214ENST00000466704 PRPF38BQ5VTL8 546 aaKnown RBP8.6□□□□□ -1.03
CALD1-214ENST00000466704 CABLES1Q8TDN4 633 aa8.6□□□□□ -1.03
CALD1-214ENST00000466704 SLC6A16Q9GZN6 736 aa8.6□□□□□ -1.03
CALD1-214ENST00000466704 GGCXP38435 758 aa8.59□□□□□ -1.03
CALD1-214ENST00000466704 QPCTQ16769 361 aa8.59□□□□□ -1.03
CALD1-214ENST00000466704 LILRB3O75022 631 aa8.58□□□□□ -1.04
CALD1-214ENST00000466704 S1PR4O95977 384 aa8.58□□□□□ -1.04
CALD1-214ENST00000466704 MSS51Q4VC12 460 aa8.58□□□□□ -1.04
CALD1-214ENST00000466704 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.58□□□□□ -1.04
CALD1-214ENST00000466704 FAM160A2Q8N612 972 aaPredicted RBP8.57□□□□□ -1.04
CALD1-214ENST00000466704 PRR7Q8TB68 274 aa8.57□□□□□ -1.04
CALD1-214ENST00000466704 TSC1Q92574 1164 aa8.57□□□□□ -1.04
CALD1-214ENST00000466704 PPP1R18Q6NYC8 613 aa8.56□□□□□ -1.04
CALD1-214ENST00000466704 Q6ZNB5 142 aa8.56□□□□□ -1.04
CALD1-214ENST00000466704 PRDM9Q9NQV7 894 aa8.56□□□□□ -1.04
CALD1-214ENST00000466704 RTL5Q5HYW3 569 aaPredicted RBP8.55□□□□□ -1.04
CALD1-214ENST00000466704 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.55□□□□□ -1.04
CALD1-214ENST00000466704 JUNDP17535 347 aa8.54□□□□□ -1.04
CALD1-214ENST00000466704 HELBQ8NG08 1087 aaPredicted RBP8.54□□□□□ -1.04
CALD1-214ENST00000466704 CFAP99D6REC4 459 aa8.53□□□□□ -1.04
CALD1-214ENST00000466704 PPEF1O14829 653 aaPredicted RBP8.53□□□□□ -1.04
CALD1-214ENST00000466704 PPP2R2DQ66LE6 453 aa8.53□□□□□ -1.04
CALD1-214ENST00000466704 RNF223E7ERA6 249 aa8.52□□□□□ -1.05
CALD1-214ENST00000466704 DXOO77932 396 aaKnown RBP8.52□□□□□ -1.05
CALD1-214ENST00000466704 RFC5P40937 340 aa8.52□□□□□ -1.05
CALD1-214ENST00000466704 MMP16P51512 607 aa8.52□□□□□ -1.05
CALD1-214ENST00000466704 LAPTM4AQ15012 233 aa8.51□□□□□ -1.05
CALD1-214ENST00000466704 DESI1Q6ICB0 168 aa8.51□□□□□ -1.05
CALD1-214ENST00000466704 AP1G2O75843 785 aa8.5□□□□□ -1.05
CALD1-214ENST00000466704 FBXO31Q5XUX0 539 aaPredicted RBP8.5□□□□□ -1.05
CALD1-214ENST00000466704 CCDC24Q8N4L8 307 aa8.5□□□□□ -1.05
CALD1-214ENST00000466704 ANKLE1Q8NAG6 615 aa8.5□□□□□ -1.05
CALD1-214ENST00000466704 FCF1Q9Y324 198 aaKnown RBP8.5□□□□□ -1.05
CALD1-214ENST00000466704 NUDT12Q9BQG2 462 aa8.49□□□□□ -1.05
CALD1-214ENST00000466704 LCE2BO14633 110 aa8.48□□□□□ -1.05
CALD1-214ENST00000466704 PTPRNQ16849 979 aa8.48□□□□□ -1.05
CALD1-214ENST00000466704 CCNYL3P0C7X3 344 aa8.47□□□□□ -1.05
CALD1-214ENST00000466704 TMEM259Q4ZIN3 620 aa8.47□□□□□ -1.05
CALD1-214ENST00000466704 CTDSPL2Q05D32 466 aa8.46□□□□□ -1.06
CALD1-214ENST00000466704 LYPD8Q6UX82 237 aa8.46□□□□□ -1.06
CALD1-214ENST00000466704 PER1O15534 1290 aaPredicted RBP8.45□□□□□ -1.06
CALD1-214ENST00000466704 ZBTB24O43167 697 aaPredicted RBP8.45□□□□□ -1.06
CALD1-214ENST00000466704 CTHP32929 405 aa8.45□□□□□ -1.06
CALD1-214ENST00000466704 USP17L8P0C7I0 530 aa8.44□□□□□ -1.06
CALD1-214ENST00000466704 KCNH2Q12809 1159 aa8.42□□□□□ -1.06
CALD1-214ENST00000466704 PLA2G2CQ5R387 149 aa8.42□□□□□ -1.06
CALD1-214ENST00000466704 TRAF7Q6Q0C0 670 aa8.42□□□□□ -1.06
CALD1-214ENST00000466704 BANK1Q8NDB2 785 aa8.42□□□□□ -1.06
CALD1-214ENST00000466704 LRRN4Q8WUT4 740 aa8.42□□□□□ -1.06
CALD1-214ENST00000466704 EVA1BQ9NVM1 165 aa8.42□□□□□ -1.06
CALD1-214ENST00000466704 SLC19A1P41440 591 aa8.41□□□□□ -1.06
CALD1-214ENST00000466704 PRKD2Q9BZL6 878 aa8.41□□□□□ -1.06
CALD1-214ENST00000466704 MAP10Q9P2G4 905 aa8.41□□□□□ -1.06
CALD1-214ENST00000466704 GFRA3O60609 400 aa8.4□□□□□ -1.06
CALD1-214ENST00000466704 F12P00748 615 aaPredicted RBP8.4□□□□□ -1.06
CALD1-214ENST00000466704 RPIAP49247 311 aa8.39□□□□□ -1.07
CALD1-214ENST00000466704 PTCRAQ6ISU1 281 aaPredicted RBP8.39□□□□□ -1.07
CALD1-214ENST00000466704 LIAT1Q6ZQX7 453 aa8.39□□□□□ -1.07
CALD1-214ENST00000466704 UNC93B1Q9H1C4 597 aa8.39□□□□□ -1.07
CALD1-214ENST00000466704 NRG2O14511 850 aaPredicted RBP8.38□□□□□ -1.07
CALD1-214ENST00000466704 V9GY48 417 aaPredicted RBP8.38□□□□□ -1.07
CALD1-214ENST00000466704 APBB1O00213 710 aa8.37□□□□□ -1.07
CALD1-214ENST00000466704 CD2BP2O95400 341 aaKnown RBP8.37□□□□□ -1.07
CALD1-214ENST00000466704 TRIM32Q13049 653 aa8.37□□□□□ -1.07
CALD1-214ENST00000466704 NR6A1Q15406 480 aa8.37□□□□□ -1.07
CALD1-214ENST00000466704 HMX1Q9NP08 348 aaPredicted RBP8.37□□□□□ -1.07
CALD1-214ENST00000466704 SNRKQ9NRH2 765 aa8.37□□□□□ -1.07
CALD1-214ENST00000466704 SPRYD7Q5W111 196 aa8.36□□□□□ -1.07
CALD1-214ENST00000466704 ARMC2Q8NEN0 867 aa8.36□□□□□ -1.07
CALD1-214ENST00000466704 PNMA1Q8ND90 353 aa8.35□□□□□ -1.07
CALD1-214ENST00000466704 EMID1Q96A84 441 aaPredicted RBP8.35□□□□□ -1.07
CALD1-214ENST00000466704 FLIIQ13045 1269 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms