RNA–Protein interactions for RNA: ENST00000466636.1

SRPRB-202, Transcript of SRP receptor subunit beta, humanhuman

TSL 3

Gene SRPRB, Length 917 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRB-202ENST00000466636 CEP170BQ9Y4F5 1589 aaPredicted RBP13.1□□□□□ -0.31
SRPRB-202ENST00000466636 MED14O60244 1454 aa13.1□□□□□ -0.31
SRPRB-202ENST00000466636 TULP4Q9NRJ4 1543 aa13.09□□□□□ -0.31
SRPRB-202ENST00000466636 QRICH2Q9H0J4 1663 aa13.09□□□□□ -0.31
SRPRB-202ENST00000466636 TECPR2O15040 1411 aa13.09□□□□□ -0.31
SRPRB-202ENST00000466636 PUS7Q96PZ0 661 aaKnown RBP13.09□□□□□ -0.31
SRPRB-202ENST00000466636 PRAM1Q96QH2 718 aa13.08□□□□□ -0.32
SRPRB-202ENST00000466636 EID1Q9Y6B2 187 aa13.08□□□□□ -0.32
SRPRB-202ENST00000466636 EVC2Q86UK5 1308 aa13.07□□□□□ -0.32
SRPRB-202ENST00000466636 KTN1Q86UP2 1357 aaKnown RBP13.07□□□□□ -0.32
SRPRB-202ENST00000466636 MYOM1P52179 1685 aa13.06□□□□□ -0.32
SRPRB-202ENST00000466636 SIRT1Q96EB6 747 aa13.06□□□□□ -0.32
SRPRB-202ENST00000466636 FKBP8Q14318 412 aa13.05□□□□□ -0.32
SRPRB-202ENST00000466636 RALBP1Q15311 655 aa13.05□□□□□ -0.32
SRPRB-202ENST00000466636 CCDC184Q52MB2 194 aa13.05□□□□□ -0.32
SRPRB-202ENST00000466636 POGKQ9P215 609 aa13.05□□□□□ -0.32
SRPRB-202ENST00000466636 ZNF142P52746 1687 aaPredicted RBP13.05□□□□□ -0.32
SRPRB-202ENST00000466636 PARD3Q8TEW0 1356 aa13.05□□□□□ -0.32
SRPRB-202ENST00000466636 PLEKHH1Q9ULM0 1364 aa13.05□□□□□ -0.32
SRPRB-202ENST00000466636 FAM135BQ49AJ0 1406 aa13.05□□□□□ -0.32
SRPRB-202ENST00000466636 SAFB2Q14151 953 aaKnown RBP eCLIP13.04□□□□□ -0.32
SRPRB-202ENST00000466636 AMER1Q5JTC6 1135 aaPredicted RBP13.04□□□□□ -0.32
SRPRB-202ENST00000466636 POTEHQ6S545 545 aa13.04□□□□□ -0.32
SRPRB-202ENST00000466636 BCANQ96GW7 911 aa13.04□□□□□ -0.32
SRPRB-202ENST00000466636 TBX22Q9Y458 520 aa13.04□□□□□ -0.32
SRPRB-202ENST00000466636 CPS1P31327 1500 aa13.03□□□□□ -0.32
SRPRB-202ENST00000466636 CENPBP07199 599 aaPredicted RBP13.03□□□□□ -0.32
SRPRB-202ENST00000466636 MINK1Q8N4C8 1332 aaPredicted RBP13.03□□□□□ -0.32
SRPRB-202ENST00000466636 WAPLQ7Z5K2 1190 aa13.02□□□□□ -0.33
SRPRB-202ENST00000466636 NPC1L1Q9UHC9 1359 aa13.02□□□□□ -0.33
SRPRB-202ENST00000466636 PTPRUQ92729 1446 aa13.02□□□□□ -0.33
SRPRB-202ENST00000466636 DIP2AQ14689 1571 aa13.02□□□□□ -0.33
SRPRB-202ENST00000466636 KNDC1Q76NI1 1749 aa13.02□□□□□ -0.33
SRPRB-202ENST00000466636 SLC26A8Q96RN1 970 aa13.01□□□□□ -0.33
SRPRB-202ENST00000466636 CARD14Q9BXL6 1004 aa13.01□□□□□ -0.33
SRPRB-202ENST00000466636 CABP2Q9NPB3 220 aa13.01□□□□□ -0.33
SRPRB-202ENST00000466636 RTN4Q9NQC3 1192 aaKnown RBP13.01□□□□□ -0.33
SRPRB-202ENST00000466636 MYBBP1AQ9BQG0 1328 aaKnown RBP13.01□□□□□ -0.33
SRPRB-202ENST00000466636 ATAD2Q6PL18 1390 aa13□□□□□ -0.33
SRPRB-202ENST00000466636 ROBO2Q9HCK4 1378 aa13□□□□□ -0.33
SRPRB-202ENST00000466636 NINLQ9Y2I6 1382 aa13□□□□□ -0.33
SRPRB-202ENST00000466636 CNGB1Q14028 1251 aaPredicted RBP13□□□□□ -0.33
SRPRB-202ENST00000466636 SLC12A5Q9H2X9 1139 aa13□□□□□ -0.33
SRPRB-202ENST00000466636 MRS2Q9HD23 443 aa13□□□□□ -0.33
SRPRB-202ENST00000466636 KNSTRNQ9Y448 316 aa13□□□□□ -0.33
SRPRB-202ENST00000466636 CC2D1BQ5T0F9 858 aaKnown RBP12.99□□□□□ -0.33
SRPRB-202ENST00000466636 ILDR1Q86SU0 546 aaPredicted RBP12.99□□□□□ -0.33
SRPRB-202ENST00000466636 ANKLE2Q86XL3 938 aa12.99□□□□□ -0.33
SRPRB-202ENST00000466636 CDK19Q9BWU1 502 aa12.99□□□□□ -0.33
SRPRB-202ENST00000466636 BRD4O60885 1362 aaPredicted RBP12.98□□□□□ -0.33
SRPRB-202ENST00000466636 SRPK2P78362 688 aaKnown RBP12.98□□□□□ -0.33
SRPRB-202ENST00000466636 TMC1Q8TDI8 760 aa12.98□□□□□ -0.33
SRPRB-202ENST00000466636 PTCH1Q13635 1447 aa12.97□□□□□ -0.33
SRPRB-202ENST00000466636 ANKRD36BQ8N2N9 1353 aa12.97□□□□□ -0.33
SRPRB-202ENST00000466636 PIK3R4Q99570 1358 aa12.97□□□□□ -0.33
SRPRB-202ENST00000466636 NSD3Q9BZ95 1437 aa12.96□□□□□ -0.33
SRPRB-202ENST00000466636 WASLO00401 505 aaPredicted RBP12.96□□□□□ -0.33
SRPRB-202ENST00000466636 NLRP13Q86W25 1043 aa12.96□□□□□ -0.33
SRPRB-202ENST00000466636 ATF5Q9Y2D1 282 aaPredicted RBP12.96□□□□□ -0.33
SRPRB-202ENST00000466636 AMOTL2Q9Y2J4 779 aa12.96□□□□□ -0.33
SRPRB-202ENST00000466636 SAMD1Q6SPF0 538 aaPredicted RBP12.95□□□□□ -0.34
SRPRB-202ENST00000466636 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
SRPRB-202ENST00000466636 CD163L1Q9NR16 1453 aa12.94□□□□□ -0.34
SRPRB-202ENST00000466636 NPHP4O75161 1426 aaPredicted RBP12.94□□□□□ -0.34
SRPRB-202ENST00000466636 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
SRPRB-202ENST00000466636 KDM4FA0A1W2PPD8 638 aa12.93□□□□□ -0.34
SRPRB-202ENST00000466636 PNISRQ8TF01 805 aaKnown RBP12.93□□□□□ -0.34
SRPRB-202ENST00000466636 A0A1W2PP64 1363 aa12.93□□□□□ -0.34
SRPRB-202ENST00000466636 USP32Q8NFA0 1604 aa12.92□□□□□ -0.34
SRPRB-202ENST00000466636 PPP2R1AP30153 589 aa12.92□□□□□ -0.34
SRPRB-202ENST00000466636 FAM9BQ8IZU0 186 aa12.91□□□□□ -0.34
SRPRB-202ENST00000466636 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
SRPRB-202ENST00000466636 ATP7BP35670 1465 aa12.91□□□□□ -0.34
SRPRB-202ENST00000466636 KCNA6P17658 529 aa12.9□□□□□ -0.34
SRPRB-202ENST00000466636 CABP1Q9NZU7 370 aa12.9□□□□□ -0.34
SRPRB-202ENST00000466636 U3KPZ7 1027 aaPredicted RBP12.9□□□□□ -0.34
SRPRB-202ENST00000466636 NSD2O96028 1365 aa12.9□□□□□ -0.34
SRPRB-202ENST00000466636 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.9□□□□□ -0.34
SRPRB-202ENST00000466636 CGNL1Q0VF96 1302 aa12.89□□□□□ -0.35
SRPRB-202ENST00000466636 PRR36Q9H6K5 1346 aa12.89□□□□□ -0.35
SRPRB-202ENST00000466636 NCKAP5LQ9HCH0 1330 aa12.89□□□□□ -0.35
SRPRB-202ENST00000466636 SETD1BQ9UPS6 1966 aaKnown RBP12.89□□□□□ -0.35
SRPRB-202ENST00000466636 NUDT16Q96DE0 195 aaKnown RBP12.89□□□□□ -0.35
SRPRB-202ENST00000466636 PPIP5K1Q6PFW1 1433 aa12.88□□□□□ -0.35
SRPRB-202ENST00000466636 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
SRPRB-202ENST00000466636 CPSF1Q10570 1443 aaKnown RBP12.88□□□□□ -0.35
SRPRB-202ENST00000466636 HNRNPUQ00839 825 aaKnown RBP eCLIP12.87□□□□□ -0.35
SRPRB-202ENST00000466636 CCDC61Q9Y6R9 512 aa12.87□□□□□ -0.35
SRPRB-202ENST00000466636 CDC42BPGQ6DT37 1551 aa12.86□□□□□ -0.35
SRPRB-202ENST00000466636 INSRP06213 1382 aa12.85□□□□□ -0.35
SRPRB-202ENST00000466636 MORC1Q86VD1 984 aa12.85□□□□□ -0.35
SRPRB-202ENST00000466636 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
SRPRB-202ENST00000466636 NWD1Q149M9 1564 aa12.84□□□□□ -0.35
SRPRB-202ENST00000466636 EDC4Q6P2E9 1401 aaKnown RBP12.83□□□□□ -0.36
SRPRB-202ENST00000466636 FYB1O15117 783 aa12.83□□□□□ -0.36
SRPRB-202ENST00000466636 ANKARQ7Z5J8 1434 aa12.82□□□□□ -0.36
SRPRB-202ENST00000466636 GGNBP2Q9H3C7 697 aa12.82□□□□□ -0.36
SRPRB-202ENST00000466636 NKTRP30414 1462 aaKnown RBP12.82□□□□□ -0.36
SRPRB-202ENST00000466636 LMTK3Q96Q04 1460 aa12.82□□□□□ -0.36
SRPRB-202ENST00000466636 TOPAZ1Q8N9V7 1692 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms