RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 XRN1Q8IZH2 1706 aaKnown RBP20.89■□□□□ 0.93
SNED1-208ENST00000466618 NWD1Q149M9 1564 aa20.88■□□□□ 0.93
SNED1-208ENST00000466618 HSPA5P11021 654 aaKnown RBP20.87■□□□□ 0.93
SNED1-208ENST00000466618 HNRNPUQ00839 825 aaKnown RBP eCLIP20.87■□□□□ 0.93
SNED1-208ENST00000466618 CPS1P31327 1500 aa20.87■□□□□ 0.93
SNED1-208ENST00000466618 ROBO2Q9HCK4 1378 aa20.87■□□□□ 0.93
SNED1-208ENST00000466618 PTCH1Q13635 1447 aa20.87■□□□□ 0.93
SNED1-208ENST00000466618 FAM135BQ49AJ0 1406 aa20.87■□□□□ 0.93
SNED1-208ENST00000466618 PPP4R2Q9NY27 417 aa20.87■□□□□ 0.93
SNED1-208ENST00000466618 KNDC1Q76NI1 1749 aa20.87■□□□□ 0.93
SNED1-208ENST00000466618 CHD2O14647 1828 aaKnown RBP20.87■□□□□ 0.93
SNED1-208ENST00000466618 EIF3AQ14152 1382 aaKnown RBP20.86■□□□□ 0.93
SNED1-208ENST00000466618 ST20-MTHFSA0A0A6YYL1 179 aa20.86■□□□□ 0.93
SNED1-208ENST00000466618 PRAM1Q96QH2 718 aa20.84■□□□□ 0.93
SNED1-208ENST00000466618 NOP58Q9Y2X3 529 aaKnown RBP20.84■□□□□ 0.93
SNED1-208ENST00000466618 ARHGEF28Q8N1W1 1705 aaKnown RBP20.84■□□□□ 0.93
SNED1-208ENST00000466618 PLEKHH1Q9ULM0 1364 aa20.83■□□□□ 0.93
SNED1-208ENST00000466618 WAPLQ7Z5K2 1190 aa20.83■□□□□ 0.92
SNED1-208ENST00000466618 TESK2Q96S53 571 aa20.83■□□□□ 0.92
SNED1-208ENST00000466618 CENPJQ9HC77 1338 aaPredicted RBP20.83■□□□□ 0.92
SNED1-208ENST00000466618 ZNF335Q9H4Z2 1342 aaPredicted RBP20.82■□□□□ 0.92
SNED1-208ENST00000466618 NKTRP30414 1462 aaKnown RBP20.82■□□□□ 0.92
SNED1-208ENST00000466618 SBNO2Q9Y2G9 1366 aa20.81■□□□□ 0.92
SNED1-208ENST00000466618 STRCP1A6NGW2 1772 aa20.79■□□□□ 0.92
SNED1-208ENST00000466618 PAK3O75914 559 aaPredicted RBP20.79■□□□□ 0.92
SNED1-208ENST00000466618 NBR1Q14596 966 aa20.79■□□□□ 0.92
SNED1-208ENST00000466618 POGKQ9P215 609 aa20.79■□□□□ 0.92
SNED1-208ENST00000466618 SAFB2Q14151 953 aaKnown RBP eCLIP20.76■□□□□ 0.91
SNED1-208ENST00000466618 PROSER2Q86WR7 435 aaPredicted RBP20.74■□□□□ 0.91
SNED1-208ENST00000466618 B4GALNT3Q6L9W6 998 aa20.73■□□□□ 0.91
SNED1-208ENST00000466618 SALL2Q9Y467 1007 aaPredicted RBP20.73■□□□□ 0.91
SNED1-208ENST00000466618 NCOA3Q9Y6Q9 1424 aa20.73■□□□□ 0.91
SNED1-208ENST00000466618 QRICH2Q9H0J4 1663 aa20.73■□□□□ 0.91
SNED1-208ENST00000466618 SLC24A1O60721 1099 aa20.73■□□□□ 0.91
SNED1-208ENST00000466618 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.72■□□□□ 0.91
SNED1-208ENST00000466618 RBM33Q96EV2 1170 aaKnown RBP20.72■□□□□ 0.91
SNED1-208ENST00000466618 LRRC7Q96NW7 1537 aa20.72■□□□□ 0.91
SNED1-208ENST00000466618 TMEM94Q12767 1356 aa20.72■□□□□ 0.91
SNED1-208ENST00000466618 LTBP4Q8N2S1 1624 aa20.72■□□□□ 0.91
SNED1-208ENST00000466618 MINK1Q8N4C8 1332 aaPredicted RBP20.72■□□□□ 0.91
SNED1-208ENST00000466618 C11orf95C9JLR9 678 aaPredicted RBP20.72■□□□□ 0.91
SNED1-208ENST00000466618 DISP3Q9P2K9 1392 aa20.7■□□□□ 0.9
SNED1-208ENST00000466618 ADGRB2O60241 1585 aa20.7■□□□□ 0.9
SNED1-208ENST00000466618 TULP4Q9NRJ4 1543 aa20.69■□□□□ 0.9
SNED1-208ENST00000466618 ADGRL3Q9HAR2 1447 aa20.69■□□□□ 0.9
SNED1-208ENST00000466618 TMF1P82094 1093 aa20.69■□□□□ 0.9
SNED1-208ENST00000466618 EVC2Q86UK5 1308 aa20.67■□□□□ 0.9
SNED1-208ENST00000466618 WASLO00401 505 aaPredicted RBP20.66■□□□□ 0.9
SNED1-208ENST00000466618 PUS7Q96PZ0 661 aaKnown RBP20.65■□□□□ 0.9
SNED1-208ENST00000466618 NALCNQ8IZF0 1738 aa20.65■□□□□ 0.9
SNED1-208ENST00000466618 CDK19Q9BWU1 502 aa20.65■□□□□ 0.9
SNED1-208ENST00000466618 C19orf44Q9H6X5 657 aa20.65■□□□□ 0.9
SNED1-208ENST00000466618 KIF7Q2M1P5 1343 aa20.64■□□□□ 0.89
SNED1-208ENST00000466618 WASHC2AQ641Q2 1341 aa20.64■□□□□ 0.89
SNED1-208ENST00000466618 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
SNED1-208ENST00000466618 CCDC7Q96M83 1385 aa20.62■□□□□ 0.89
SNED1-208ENST00000466618 DCCP43146 1447 aa20.62■□□□□ 0.89
SNED1-208ENST00000466618 CDCA8Q53HL2 280 aa20.62■□□□□ 0.89
SNED1-208ENST00000466618 XIRP1Q702N8 1843 aaKnown RBP20.62■□□□□ 0.89
SNED1-208ENST00000466618 C14orf37Q86TY3 774 aa20.61■□□□□ 0.89
SNED1-208ENST00000466618 CABP2Q9NPB3 220 aa20.61■□□□□ 0.89
SNED1-208ENST00000466618 CCDC184Q52MB2 194 aa20.61■□□□□ 0.89
SNED1-208ENST00000466618 IL27Q8NEV9 243 aa20.61■□□□□ 0.89
SNED1-208ENST00000466618 SRPK2P78362 688 aaKnown RBP20.59■□□□□ 0.89
SNED1-208ENST00000466618 IPO9Q96P70 1041 aaKnown RBP20.59■□□□□ 0.89
SNED1-208ENST00000466618 PRR36Q9H6K5 1346 aa20.58■□□□□ 0.89
SNED1-208ENST00000466618 MSH6P52701 1360 aa20.58■□□□□ 0.89
SNED1-208ENST00000466618 RTL5Q5HYW3 569 aaPredicted RBP20.57■□□□□ 0.88
SNED1-208ENST00000466618 ATP7BP35670 1465 aa20.57■□□□□ 0.88
SNED1-208ENST00000466618 ZBED9Q6R2W3 1325 aa20.57■□□□□ 0.88
SNED1-208ENST00000466618 ATAD2Q6PL18 1390 aa20.56■□□□□ 0.88
SNED1-208ENST00000466618 ANKARQ7Z5J8 1434 aa20.56■□□□□ 0.88
SNED1-208ENST00000466618 NUDT16Q96DE0 195 aaKnown RBP20.55■□□□□ 0.88
SNED1-208ENST00000466618 FMN2Q9NZ56 1722 aa20.55■□□□□ 0.88
SNED1-208ENST00000466618 CADPS2Q86UW7 1296 aa20.55■□□□□ 0.88
SNED1-208ENST00000466618 ATF3P18847 181 aa20.54■□□□□ 0.88
SNED1-208ENST00000466618 USP32Q8NFA0 1604 aa20.54■□□□□ 0.88
SNED1-208ENST00000466618 CCDC136Q96JN2 1154 aa20.53■□□□□ 0.88
SNED1-208ENST00000466618 CCDC61Q9Y6R9 512 aa20.53■□□□□ 0.88
SNED1-208ENST00000466618 ANP32AP39687 249 aaKnown RBP20.53■□□□□ 0.88
SNED1-208ENST00000466618 MST1RQ04912 1400 aa20.53■□□□□ 0.88
SNED1-208ENST00000466618 NUTM2FA1L443 756 aa20.52■□□□□ 0.88
SNED1-208ENST00000466618 POLR3GLQ9BT43 218 aa20.51■□□□□ 0.87
SNED1-208ENST00000466618 C1orf167Q5SNV9 1468 aa20.51■□□□□ 0.87
SNED1-208ENST00000466618 NINLQ9Y2I6 1382 aa20.5■□□□□ 0.87
SNED1-208ENST00000466618 IQSEC2Q5JU85 1478 aa20.5■□□□□ 0.87
SNED1-208ENST00000466618 SLC12A5Q9H2X9 1139 aa20.5■□□□□ 0.87
SNED1-208ENST00000466618 ZBTB47Q9UFB7 747 aaPredicted RBP20.5■□□□□ 0.87
SNED1-208ENST00000466618 CABP1Q9NZU7 370 aa20.49■□□□□ 0.87
SNED1-208ENST00000466618 PLEKHG3A1L390 1219 aa20.49■□□□□ 0.87
SNED1-208ENST00000466618 PPIP5K1Q6PFW1 1433 aa20.49■□□□□ 0.87
SNED1-208ENST00000466618 MYOM1P52179 1685 aa20.48■□□□□ 0.87
SNED1-208ENST00000466618 TOPAZ1Q8N9V7 1692 aa20.48■□□□□ 0.87
SNED1-208ENST00000466618 CERKQ8TCT0 537 aa20.48■□□□□ 0.87
SNED1-208ENST00000466618 RTN4Q9NQC3 1192 aaKnown RBP20.47■□□□□ 0.87
SNED1-208ENST00000466618 SLAIN2Q9P270 581 aa20.47■□□□□ 0.87
SNED1-208ENST00000466618 CD163L1Q9NR16 1453 aa20.47■□□□□ 0.87
SNED1-208ENST00000466618 FAM9BQ8IZU0 186 aa20.46■□□□□ 0.87
SNED1-208ENST00000466618 TMC1Q8TDI8 760 aa20.46■□□□□ 0.87
SNED1-208ENST00000466618 ORAI2Q96SN7 254 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms