RNA–Protein interactions for RNA: ENST00000466425.1

PSMB4-202, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 665 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-202ENST00000466425 CCDC7Q96M83 1385 aa9.09□□□□□ -0.95
PSMB4-202ENST00000466425 SPATA31E1Q6ZUB1 1445 aa9.08□□□□□ -0.96
PSMB4-202ENST00000466425 CNTLNQ9NXG0 1405 aa9.08□□□□□ -0.96
PSMB4-202ENST00000466425 ROCK2O75116 1388 aaKnown RBP9.08□□□□□ -0.96
PSMB4-202ENST00000466425 CDC42BPBQ9Y5S2 1711 aa9.08□□□□□ -0.96
PSMB4-202ENST00000466425 ABCC1P33527 1531 aa9.07□□□□□ -0.96
PSMB4-202ENST00000466425 DPY19L2Q6NUT2 758 aa9.07□□□□□ -0.96
PSMB4-202ENST00000466425 LSM11P83369 360 aaKnown RBP eCLIP9.06□□□□□ -0.96
PSMB4-202ENST00000466425 CARD11Q9BXL7 1154 aa9.06□□□□□ -0.96
PSMB4-202ENST00000466425 KANK1Q14678 1352 aa9.06□□□□□ -0.96
PSMB4-202ENST00000466425 USP47Q96K76 1375 aa9.06□□□□□ -0.96
PSMB4-202ENST00000466425 RALGAPBQ86X10 1494 aa9.06□□□□□ -0.96
PSMB4-202ENST00000466425 UNC13BO14795 1591 aa9.05□□□□□ -0.96
PSMB4-202ENST00000466425 ATP10AO60312 1499 aa9.05□□□□□ -0.96
PSMB4-202ENST00000466425 SOX12O15370 315 aa9.05□□□□□ -0.96
PSMB4-202ENST00000466425 CHGAP10645 457 aaKnown RBP9.05□□□□□ -0.96
PSMB4-202ENST00000466425 ZNF326Q5BKZ1 582 aaKnown RBP9.05□□□□□ -0.96
PSMB4-202ENST00000466425 DCAF11Q8TEB1 546 aa9.05□□□□□ -0.96
PSMB4-202ENST00000466425 TRAPPC8Q9Y2L5 1435 aa9.05□□□□□ -0.96
PSMB4-202ENST00000466425 FANCAO15360 1455 aa9.04□□□□□ -0.96
PSMB4-202ENST00000466425 MAGI2Q86UL8 1455 aa9.04□□□□□ -0.96
PSMB4-202ENST00000466425 PHF8Q9UPP1 1060 aa9.04□□□□□ -0.96
PSMB4-202ENST00000466425 RICTORQ6R327 1708 aa9.04□□□□□ -0.96
PSMB4-202ENST00000466425 CD109Q6YHK3 1445 aa9.04□□□□□ -0.96
PSMB4-202ENST00000466425 KIF7Q2M1P5 1343 aa9.04□□□□□ -0.96
PSMB4-202ENST00000466425 AFAP1Q8N556 730 aa9.02□□□□□ -0.97
PSMB4-202ENST00000466425 SCAPERQ9BY12 1400 aa9.02□□□□□ -0.97
PSMB4-202ENST00000466425 NEO1Q92859 1461 aa9.02□□□□□ -0.97
PSMB4-202ENST00000466425 IQGAP3Q86VI3 1631 aa9.02□□□□□ -0.97
PSMB4-202ENST00000466425 DHX29Q7Z478 1369 aaKnown RBP9.01□□□□□ -0.97
PSMB4-202ENST00000466425 RGS20O76081 388 aa9.01□□□□□ -0.97
PSMB4-202ENST00000466425 NLRP6P59044 892 aa9.01□□□□□ -0.97
PSMB4-202ENST00000466425 PRKRIP1Q9H875 184 aaPredicted RBP9.01□□□□□ -0.97
PSMB4-202ENST00000466425 ADGRL1O94910 1474 aa9.01□□□□□ -0.97
PSMB4-202ENST00000466425 C11orf95C9JLR9 678 aaPredicted RBP9□□□□□ -0.97
PSMB4-202ENST00000466425 ZSWIM6Q9HCJ5 1215 aa9□□□□□ -0.97
PSMB4-202ENST00000466425 BOLA1Q9Y3E2 137 aa9□□□□□ -0.97
PSMB4-202ENST00000466425 GPRASP1Q5JY77 1395 aa8.99□□□□□ -0.97
PSMB4-202ENST00000466425 KTN1Q86UP2 1357 aaKnown RBP8.99□□□□□ -0.97
PSMB4-202ENST00000466425 PRAG1Q86YV5 1406 aa8.99□□□□□ -0.97
PSMB4-202ENST00000466425 NEFLP07196 543 aa8.99□□□□□ -0.97
PSMB4-202ENST00000466425 PLA2R1Q13018 1463 aa8.99□□□□□ -0.97
PSMB4-202ENST00000466425 ZNF518AQ6AHZ1 1483 aa8.99□□□□□ -0.97
PSMB4-202ENST00000466425 ZFYVE16Q7Z3T8 1539 aa8.99□□□□□ -0.97
PSMB4-202ENST00000466425 RGL3Q3MIN7 710 aa8.98□□□□□ -0.97
PSMB4-202ENST00000466425 ATP7AQ04656 1500 aa8.98□□□□□ -0.97
PSMB4-202ENST00000466425 PTPRTO14522 1441 aa8.97□□□□□ -0.97
PSMB4-202ENST00000466425 KIF3BO15066 747 aa8.97□□□□□ -0.97
PSMB4-202ENST00000466425 PAXIP1Q6ZW49 1069 aaPredicted RBP8.97□□□□□ -0.97
PSMB4-202ENST00000466425 ILDR1Q86SU0 546 aaPredicted RBP8.97□□□□□ -0.97
PSMB4-202ENST00000466425 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.97□□□□□ -0.97
PSMB4-202ENST00000466425 FRMPD1Q5SYB0 1578 aa8.97□□□□□ -0.97
PSMB4-202ENST00000466425 ST20-MTHFSA0A0A6YYL1 179 aa8.96□□□□□ -0.98
PSMB4-202ENST00000466425 GPR153Q6NV75 609 aa8.96□□□□□ -0.98
PSMB4-202ENST00000466425 HS6ST3Q8IZP7 471 aa8.96□□□□□ -0.98
PSMB4-202ENST00000466425 BBXQ8WY36 941 aaPredicted RBP8.96□□□□□ -0.98
PSMB4-202ENST00000466425 MRS2Q9HD23 443 aa8.96□□□□□ -0.98
PSMB4-202ENST00000466425 A2MP01023 1474 aa8.96□□□□□ -0.98
PSMB4-202ENST00000466425 ZMYM4Q5VZL5 1548 aa8.95□□□□□ -0.98
PSMB4-202ENST00000466425 KDM5CP41229 1560 aa8.95□□□□□ -0.98
PSMB4-202ENST00000466425 EIF2AK4Q9P2K8 1649 aaKnown RBP8.95□□□□□ -0.98
PSMB4-202ENST00000466425 HNRNPUQ00839 825 aaKnown RBP eCLIP8.95□□□□□ -0.98
PSMB4-202ENST00000466425 RALBP1Q15311 655 aa8.95□□□□□ -0.98
PSMB4-202ENST00000466425 CDCA8Q53HL2 280 aa8.95□□□□□ -0.98
PSMB4-202ENST00000466425 MS4A4AQ96JQ5 239 aa8.95□□□□□ -0.98
PSMB4-202ENST00000466425 POLR3GLQ9BT43 218 aa8.95□□□□□ -0.98
PSMB4-202ENST00000466425 MFRPQ9BY79 579 aa8.95□□□□□ -0.98
PSMB4-202ENST00000466425 INO80Q9ULG1 1556 aaPredicted RBP8.95□□□□□ -0.98
PSMB4-202ENST00000466425 TMF1P82094 1093 aa8.94□□□□□ -0.98
PSMB4-202ENST00000466425 CFAP44Q96MT7 982 aa8.94□□□□□ -0.98
PSMB4-202ENST00000466425 SUPT16HQ9Y5B9 1047 aaKnown RBP8.94□□□□□ -0.98
PSMB4-202ENST00000466425 WASHC2CQ9Y4E1 1318 aa8.94□□□□□ -0.98
PSMB4-202ENST00000466425 POGZQ7Z3K3 1410 aa8.94□□□□□ -0.98
PSMB4-202ENST00000466425 MLH3Q9UHC1 1453 aa8.94□□□□□ -0.98
PSMB4-202ENST00000466425 TRPM2O94759 1503 aa8.94□□□□□ -0.98
PSMB4-202ENST00000466425 COL17A1Q9UMD9 1497 aaPredicted RBP8.93□□□□□ -0.98
PSMB4-202ENST00000466425 ARHGEF40Q8TER5 1519 aa8.93□□□□□ -0.98
PSMB4-202ENST00000466425 VWDEQ8N2E2 1590 aa8.93□□□□□ -0.98
PSMB4-202ENST00000466425 LAMC1P11047 1609 aa8.92□□□□□ -0.98
PSMB4-202ENST00000466425 NEURL4Q96JN8 1562 aa8.92□□□□□ -0.98
PSMB4-202ENST00000466425 HECW2Q9P2P5 1572 aa8.92□□□□□ -0.98
PSMB4-202ENST00000466425 Q6ZNB5 142 aa8.92□□□□□ -0.98
PSMB4-202ENST00000466425 FBXO22Q8NEZ5 403 aa8.92□□□□□ -0.98
PSMB4-202ENST00000466425 PRDM15P57071 1507 aaPredicted RBP8.91□□□□□ -0.98
PSMB4-202ENST00000466425 LMTK2Q8IWU2 1503 aa8.91□□□□□ -0.98
PSMB4-202ENST00000466425 EIF3AQ14152 1382 aaKnown RBP8.91□□□□□ -0.98
PSMB4-202ENST00000466425 MICALL2Q8IY33 904 aa8.91□□□□□ -0.98
PSMB4-202ENST00000466425 DEPDC5O75140 1603 aa8.91□□□□□ -0.98
PSMB4-202ENST00000466425 ZBED9Q6R2W3 1325 aa8.9□□□□□ -0.98
PSMB4-202ENST00000466425 NBPF1Q3BBV0 1214 aa8.9□□□□□ -0.98
PSMB4-202ENST00000466425 ERICH6BQ5W0A0 696 aa8.9□□□□□ -0.98
PSMB4-202ENST00000466425 TMC1Q8TDI8 760 aa8.9□□□□□ -0.98
PSMB4-202ENST00000466425 TET3O43151 1660 aa8.9□□□□□ -0.98
PSMB4-202ENST00000466425 KIDINS220Q9ULH0 1771 aa8.89□□□□□ -0.99
PSMB4-202ENST00000466425 BRD4O60885 1362 aaPredicted RBP8.89□□□□□ -0.99
PSMB4-202ENST00000466425 BCORL1Q5H9F3 1711 aa8.89□□□□□ -0.99
PSMB4-202ENST00000466425 RPGRIP1LQ68CZ1 1315 aa8.89□□□□□ -0.99
PSMB4-202ENST00000466425 MYBBP1AQ9BQG0 1328 aaKnown RBP8.89□□□□□ -0.99
PSMB4-202ENST00000466425 TULP1O00294 542 aaPredicted RBP8.89□□□□□ -0.99
PSMB4-202ENST00000466425 FAM9BQ8IZU0 186 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms