RNA–Protein interactions for RNA: ENST00000465703.5

SKIV2L-204, Transcript of Ski2 like RNA helicase, humanhuman

TSL 1 (best)

Gene SKIV2L, Length 4,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKIV2L-204ENST00000465703 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.33■□□□□ 0.52
SKIV2L-204ENST00000465703 CWC15Q9P013 229 aaKnown RBP18.33■□□□□ 0.52
SKIV2L-204ENST00000465703 UBE2Q2Q8WVN8 375 aa18.32■□□□□ 0.52
SKIV2L-204ENST00000465703 NAT10Q9H0A0 1025 aaKnown RBP18.32■□□□□ 0.52
SKIV2L-204ENST00000465703 MAP3K1Q13233 1512 aa18.32■□□□□ 0.52
SKIV2L-204ENST00000465703 EHBP1L1Q8N3D4 1523 aa18.32■□□□□ 0.52
SKIV2L-204ENST00000465703 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
SKIV2L-204ENST00000465703 HOOK1Q9UJC3 728 aaKnown RBP18.32■□□□□ 0.52
SKIV2L-204ENST00000465703 AMPHP49418 695 aa18.32■□□□□ 0.52
SKIV2L-204ENST00000465703 ERC2O15083 957 aa18.31■□□□□ 0.52
SKIV2L-204ENST00000465703 GAPVD1Q14C86 1478 aa18.31■□□□□ 0.52
SKIV2L-204ENST00000465703 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
SKIV2L-204ENST00000465703 C11orf95C9JLR9 678 aaPredicted RBP18.3■□□□□ 0.52
SKIV2L-204ENST00000465703 BCAR3O75815 825 aa18.3■□□□□ 0.52
SKIV2L-204ENST00000465703 MVPQ14764 893 aaKnown RBP18.3■□□□□ 0.52
SKIV2L-204ENST00000465703 ZNF428Q96B54 188 aa18.3■□□□□ 0.52
SKIV2L-204ENST00000465703 PDCL3Q9H2J4 239 aa18.3■□□□□ 0.52
SKIV2L-204ENST00000465703 NAIPQ13075 1403 aa18.29■□□□□ 0.52
SKIV2L-204ENST00000465703 CCP110O43303 1012 aa18.29■□□□□ 0.52
SKIV2L-204ENST00000465703 RBM10P98175 930 aaKnown RBP18.29■□□□□ 0.52
SKIV2L-204ENST00000465703 TPD52L1Q16890 204 aaPredicted RBP18.29■□□□□ 0.52
SKIV2L-204ENST00000465703 IPO7O95373 1038 aaKnown RBP18.29■□□□□ 0.52
SKIV2L-204ENST00000465703 NEK4P51957 841 aa18.29■□□□□ 0.52
SKIV2L-204ENST00000465703 SLFN5Q08AF3 891 aa18.29■□□□□ 0.52
SKIV2L-204ENST00000465703 TAF3Q5VWG9 929 aa18.29■□□□□ 0.52
SKIV2L-204ENST00000465703 PDCL2Q8N4E4 241 aa18.29■□□□□ 0.52
SKIV2L-204ENST00000465703 CFTRP13569 1480 aa18.28■□□□□ 0.52
SKIV2L-204ENST00000465703 UQCRHLA0A096LP55 91 aa18.28■□□□□ 0.52
SKIV2L-204ENST00000465703 UQCRHP07919 91 aa18.28■□□□□ 0.52
SKIV2L-204ENST00000465703 HSP90B2PQ58FF3 399 aa18.28■□□□□ 0.52
SKIV2L-204ENST00000465703 ANKRD20A12PQ8NF67 263 aa18.28■□□□□ 0.52
SKIV2L-204ENST00000465703 IFIT2P09913 472 aaKnown RBP18.28■□□□□ 0.52
SKIV2L-204ENST00000465703 MTHFSP49914 203 aa18.28■□□□□ 0.52
SKIV2L-204ENST00000465703 WDR33Q9C0J8 1336 aaKnown RBP18.27■□□□□ 0.52
SKIV2L-204ENST00000465703 PDIA4P13667 645 aaKnown RBP18.27■□□□□ 0.52
SKIV2L-204ENST00000465703 TRIM5Q9C035 493 aa18.27■□□□□ 0.51
SKIV2L-204ENST00000465703 NCOA1Q15788 1441 aa18.26■□□□□ 0.51
SKIV2L-204ENST00000465703 PSMA5P28066 241 aa18.26■□□□□ 0.51
SKIV2L-204ENST00000465703 ATF7IPQ6VMQ6 1270 aa18.26■□□□□ 0.51
SKIV2L-204ENST00000465703 GNAI3P08754 354 aa18.25■□□□□ 0.51
SKIV2L-204ENST00000465703 EXOSC9Q06265 439 aaKnown RBP18.25■□□□□ 0.51
SKIV2L-204ENST00000465703 RASSF8Q8NHQ8 419 aa18.25■□□□□ 0.51
SKIV2L-204ENST00000465703 TAF7LQ5H9L4 462 aa18.25■□□□□ 0.51
SKIV2L-204ENST00000465703 CHMP3Q9Y3E7 222 aa18.25■□□□□ 0.51
SKIV2L-204ENST00000465703 PTPRGP23470 1445 aa18.25■□□□□ 0.51
SKIV2L-204ENST00000465703 TOP2BQ02880 1626 aa18.24■□□□□ 0.51
SKIV2L-204ENST00000465703 CCDC192P0DO97 292 aa18.24■□□□□ 0.51
SKIV2L-204ENST00000465703 MCM5P33992 734 aa18.24■□□□□ 0.51
SKIV2L-204ENST00000465703 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.24■□□□□ 0.51
SKIV2L-204ENST00000465703 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
SKIV2L-204ENST00000465703 NGDNQ8NEJ9 315 aaKnown RBP18.23■□□□□ 0.51
SKIV2L-204ENST00000465703 TRIM29Q14134 588 aa18.22■□□□□ 0.51
SKIV2L-204ENST00000465703 ERCC4Q92889 916 aaPredicted RBP18.22■□□□□ 0.51
SKIV2L-204ENST00000465703 CPLX1O14810 134 aa18.22■□□□□ 0.51
SKIV2L-204ENST00000465703 CHD1LQ86WJ1 897 aa18.22■□□□□ 0.51
SKIV2L-204ENST00000465703 CCDC112Q8NEF3 446 aa18.22■□□□□ 0.51
SKIV2L-204ENST00000465703 C9orf78Q9NZ63 289 aaPredicted RBP18.22■□□□□ 0.51
SKIV2L-204ENST00000465703 NEXNQ0ZGT2 675 aa18.22■□□□□ 0.51
SKIV2L-204ENST00000465703 SYNE3Q6ZMZ3 975 aa18.21■□□□□ 0.51
SKIV2L-204ENST00000465703 ERBINQ96RT1 1412 aa18.21■□□□□ 0.51
SKIV2L-204ENST00000465703 AEBP1Q8IUX7 1158 aa18.21■□□□□ 0.51
SKIV2L-204ENST00000465703 NCAPD3P42695 1498 aa18.21■□□□□ 0.51
SKIV2L-204ENST00000465703 TULP1O00294 542 aaPredicted RBP18.2■□□□□ 0.5
SKIV2L-204ENST00000465703 CLCN1P35523 988 aa18.2■□□□□ 0.5
SKIV2L-204ENST00000465703 CNTROBQ8N137 903 aa18.2■□□□□ 0.5
SKIV2L-204ENST00000465703 G3BP1Q13283 466 aaKnown RBP eCLIP18.19■□□□□ 0.54e-7■□□□□ 8.3
SKIV2L-204ENST00000465703 SDF4Q9BRK5 362 aa18.19■□□□□ 0.5
SKIV2L-204ENST00000465703 AKAP17AQ02040 695 aaKnown RBP18.19■□□□□ 0.5
SKIV2L-204ENST00000465703 CREBRFQ8IUR6 639 aa18.19■□□□□ 0.5
SKIV2L-204ENST00000465703 AK7Q96M32 723 aa18.19■□□□□ 0.5
SKIV2L-204ENST00000465703 TEFQ10587 303 aa18.19■□□□□ 0.5
SKIV2L-204ENST00000465703 NBPF1Q3BBV0 1214 aa18.19■□□□□ 0.5
SKIV2L-204ENST00000465703 KINO60870 393 aaKnown RBP18.18■□□□□ 0.5
SKIV2L-204ENST00000465703 HIP1O00291 1037 aa18.18■□□□□ 0.5
SKIV2L-204ENST00000465703 DDX58O95786 925 aaKnown RBP18.18■□□□□ 0.5
SKIV2L-204ENST00000465703 DHX29Q7Z478 1369 aaKnown RBP18.17■□□□□ 0.5
SKIV2L-204ENST00000465703 ANKRD30BQ9BXX2 1392 aa18.17■□□□□ 0.5
SKIV2L-204ENST00000465703 MINK1Q8N4C8 1332 aaPredicted RBP18.17■□□□□ 0.5
SKIV2L-204ENST00000465703 NOB1Q9ULX3 412 aaKnown RBP18.17■□□□□ 0.5
SKIV2L-204ENST00000465703 NPHP1O15259 732 aa18.17■□□□□ 0.5
SKIV2L-204ENST00000465703 TBC1D2Q9BYX2 928 aa18.17■□□□□ 0.5
SKIV2L-204ENST00000465703 PES1O00541 588 aaKnown RBP18.16■□□□□ 0.5
SKIV2L-204ENST00000465703 AQRO60306 1485 aaKnown RBP eCLIP18.16■□□□□ 0.51e-6■■■■■ 30.2
SKIV2L-204ENST00000465703 CCDC47Q96A33 483 aaKnown RBP18.16■□□□□ 0.5
SKIV2L-204ENST00000465703 CDR1P51861 262 aa18.16■□□□□ 0.5
SKIV2L-204ENST00000465703 UBTFL1P0CB47 393 aaPredicted RBP18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 MLECQ14165 292 aa18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 LRPPRCP42704 1394 aaKnown RBP18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 RAD54L2Q9Y4B4 1467 aa18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 FIBPO43427 364 aa18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 NUTM2DQ5VT03 806 aaPredicted RBP18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 OLFM4Q6UX06 510 aa18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 TRDNQ13061 729 aa18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 SRCIN1Q9C0H9 1055 aa18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 TSPYL4Q9UJ04 414 aa18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 NKTRP30414 1462 aaKnown RBP18.15■□□□□ 0.5
SKIV2L-204ENST00000465703 KRT85P78386 507 aa18.14■□□□□ 0.49
SKIV2L-204ENST00000465703 WWC1Q8IX03 1113 aa18.14■□□□□ 0.49
SKIV2L-204ENST00000465703 CLASRPQ8N2M8 674 aaKnown RBP18.14■□□□□ 0.49
SKIV2L-204ENST00000465703 TWISTNBQ3B726 338 aaPredicted RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms