RNA–Protein interactions for RNA: ENST00000465596.1

THBS3-205, Transcript of thrombospondin 3, humanhuman

TSL 5

Gene THBS3, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-205ENST00000465596 C19orf44Q9H6X5 657 aa11.25□□□□□ -0.61
THBS3-205ENST00000465596 SIRT1Q96EB6 747 aa11.24□□□□□ -0.61
THBS3-205ENST00000465596 C1orf167Q5SNV9 1468 aa11.24□□□□□ -0.61
THBS3-205ENST00000465596 RALGAPBQ86X10 1494 aa11.24□□□□□ -0.61
THBS3-205ENST00000465596 TRPM3Q9HCF6 1732 aaPredicted RBP11.23□□□□□ -0.61
THBS3-205ENST00000465596 PCGF6Q9BYE7 350 aa11.23□□□□□ -0.61
THBS3-205ENST00000465596 GPRASP1Q5JY77 1395 aa11.23□□□□□ -0.61
THBS3-205ENST00000465596 MED1Q15648 1581 aaPredicted RBP11.23□□□□□ -0.61
THBS3-205ENST00000465596 COL22A1Q8NFW1 1626 aaPredicted RBP11.23□□□□□ -0.61
THBS3-205ENST00000465596 ABCA3Q99758 1704 aa11.23□□□□□ -0.61
THBS3-205ENST00000465596 CRYBG1Q9Y4K1 1723 aa11.23□□□□□ -0.61
THBS3-205ENST00000465596 HSPA1LP34931 641 aa11.22□□□□□ -0.61
THBS3-205ENST00000465596 PIP4K2BP78356 416 aa11.22□□□□□ -0.61
THBS3-205ENST00000465596 SLAIN2Q9P270 581 aa11.22□□□□□ -0.61
THBS3-205ENST00000465596 KDM2AQ9Y2K7 1162 aa11.22□□□□□ -0.61
THBS3-205ENST00000465596 MARF1Q9Y4F3 1742 aaKnown RBP11.21□□□□□ -0.61
THBS3-205ENST00000465596 WAPLQ7Z5K2 1190 aa11.21□□□□□ -0.61
THBS3-205ENST00000465596 TULP4Q9NRJ4 1543 aa11.2□□□□□ -0.62
THBS3-205ENST00000465596 NBPF1Q3BBV0 1214 aa11.2□□□□□ -0.62
THBS3-205ENST00000465596 NBPF8Q3BBV2 869 aa11.2□□□□□ -0.62
THBS3-205ENST00000465596 CADPS2Q86UW7 1296 aa11.2□□□□□ -0.62
THBS3-205ENST00000465596 STK26Q9P289 416 aa11.2□□□□□ -0.62
THBS3-205ENST00000465596 ALS2Q96Q42 1657 aa11.2□□□□□ -0.62
THBS3-205ENST00000465596 PXDNQ92626 1479 aa11.19□□□□□ -0.62
THBS3-205ENST00000465596 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
THBS3-205ENST00000465596 ATP7BP35670 1465 aa11.19□□□□□ -0.62
THBS3-205ENST00000465596 AKAP12Q02952 1782 aa11.18□□□□□ -0.62
THBS3-205ENST00000465596 CLSPNQ9HAW4 1339 aa11.18□□□□□ -0.62
THBS3-205ENST00000465596 ATF3P18847 181 aa11.17□□□□□ -0.62
THBS3-205ENST00000465596 NEUROD1Q13562 356 aa11.17□□□□□ -0.62
THBS3-205ENST00000465596 PRAM1Q96QH2 718 aa11.17□□□□□ -0.62
THBS3-205ENST00000465596 ANKARQ7Z5J8 1434 aa11.17□□□□□ -0.62
THBS3-205ENST00000465596 LRP6O75581 1613 aa11.16□□□□□ -0.62
THBS3-205ENST00000465596 TONSLQ96HA7 1378 aa11.16□□□□□ -0.62
THBS3-205ENST00000465596 SCAF1Q9H7N4 1312 aaKnown RBP11.15□□□□□ -0.62
THBS3-205ENST00000465596 C14orf37Q86TY3 774 aa11.15□□□□□ -0.62
THBS3-205ENST00000465596 TRAK1Q9UPV9 953 aa11.15□□□□□ -0.62
THBS3-205ENST00000465596 NRKQ7Z2Y5 1582 aa11.15□□□□□ -0.62
THBS3-205ENST00000465596 PRR36Q9H6K5 1346 aa11.14□□□□□ -0.63
THBS3-205ENST00000465596 MON2Q7Z3U7 1717 aa11.14□□□□□ -0.63
THBS3-205ENST00000465596 ORAI2Q96SN7 254 aa11.13□□□□□ -0.63
THBS3-205ENST00000465596 SOS2Q07890 1332 aaPredicted RBP11.12□□□□□ -0.63
THBS3-205ENST00000465596 MYOM1P52179 1685 aa11.12□□□□□ -0.63
THBS3-205ENST00000465596 DDX17Q92841 729 aaKnown RBP11.12□□□□□ -0.63
THBS3-205ENST00000465596 ROCK2O75116 1388 aaKnown RBP11.12□□□□□ -0.63
THBS3-205ENST00000465596 SBNO2Q9Y2G9 1366 aa11.12□□□□□ -0.63
THBS3-205ENST00000465596 PHRF1Q9P1Y6 1649 aaKnown RBP11.11□□□□□ -0.63
THBS3-205ENST00000465596 SAFB2Q14151 953 aaKnown RBP eCLIP11.11□□□□□ -0.63
THBS3-205ENST00000465596 PNPLA6Q8IY17 1366 aa11.11□□□□□ -0.63
THBS3-205ENST00000465596 USP54Q70EL1 1684 aa11.11□□□□□ -0.63
THBS3-205ENST00000465596 MINK1Q8N4C8 1332 aaPredicted RBP11.1□□□□□ -0.63
THBS3-205ENST00000465596 JCADQ9P266 1359 aa11.1□□□□□ -0.63
THBS3-205ENST00000465596 WASLO00401 505 aaPredicted RBP11.09□□□□□ -0.63
THBS3-205ENST00000465596 HIRIP3Q9BW71 556 aaPredicted RBP11.09□□□□□ -0.63
THBS3-205ENST00000465596 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.09□□□□□ -0.63
THBS3-205ENST00000465596 CENPJQ9HC77 1338 aaPredicted RBP11.09□□□□□ -0.63
THBS3-205ENST00000465596 PIK3C2AO00443 1686 aa11.08□□□□□ -0.64
THBS3-205ENST00000465596 EIF3AQ14152 1382 aaKnown RBP11.08□□□□□ -0.64
THBS3-205ENST00000465596 POGKQ9P215 609 aa11.08□□□□□ -0.64
THBS3-205ENST00000465596 PLCH1Q4KWH8 1693 aa11.08□□□□□ -0.64
THBS3-205ENST00000465596 POLR3AO14802 1390 aaPredicted RBP11.07□□□□□ -0.64
THBS3-205ENST00000465596 TIMELESSQ9UNS1 1208 aa11.07□□□□□ -0.64
THBS3-205ENST00000465596 EP400Q96L91 3159 aa11.07□□□□□ -0.64
THBS3-205ENST00000465596 NRAPQ86VF7 1730 aa11.06□□□□□ -0.64
THBS3-205ENST00000465596 NUTM2FA1L443 756 aa11.06□□□□□ -0.64
THBS3-205ENST00000465596 ESCO1Q5FWF5 840 aa11.05□□□□□ -0.64
THBS3-205ENST00000465596 TNS3Q68CZ2 1445 aa11.05□□□□□ -0.64
THBS3-205ENST00000465596 NWD2Q9ULI1 1742 aa11.05□□□□□ -0.64
THBS3-205ENST00000465596 CD163L1Q9NR16 1453 aa11.05□□□□□ -0.64
THBS3-205ENST00000465596 NPHP3Q7Z494 1330 aa11.05□□□□□ -0.64
THBS3-205ENST00000465596 SSH2Q76I76 1423 aa11.04□□□□□ -0.64
THBS3-205ENST00000465596 TESK2Q96S53 571 aa11.04□□□□□ -0.64
THBS3-205ENST00000465596 PHF8Q9UPP1 1060 aa11.04□□□□□ -0.64
THBS3-205ENST00000465596 SPATA31A6Q5VVP1 1343 aa11.04□□□□□ -0.64
THBS3-205ENST00000465596 SBNO1A3KN83 1393 aa11.03□□□□□ -0.64
THBS3-205ENST00000465596 FOXO3O43524 673 aa11.03□□□□□ -0.64
THBS3-205ENST00000465596 CDK19Q9BWU1 502 aa11.03□□□□□ -0.64
THBS3-205ENST00000465596 SPATA31A3Q5VYP0 1347 aa11.03□□□□□ -0.64
THBS3-205ENST00000465596 PPIP5K1Q6PFW1 1433 aa11.02□□□□□ -0.64
THBS3-205ENST00000465596 NUDT16Q96DE0 195 aaKnown RBP11.02□□□□□ -0.65
THBS3-205ENST00000465596 CARD11Q9BXL7 1154 aa11.02□□□□□ -0.65
THBS3-205ENST00000465596 RGS17Q9UGC6 210 aaPredicted RBP11.02□□□□□ -0.65
THBS3-205ENST00000465596 USP47Q96K76 1375 aa11.02□□□□□ -0.65
THBS3-205ENST00000465596 LMO7Q8WWI1 1683 aa11.01□□□□□ -0.65
THBS3-205ENST00000465596 CPSF1Q10570 1443 aaKnown RBP11.01□□□□□ -0.65
THBS3-205ENST00000465596 XPCQ01831 940 aaPredicted RBP11.01□□□□□ -0.65
THBS3-205ENST00000465596 CCER1Q8TC90 406 aaPredicted RBP11.01□□□□□ -0.65
THBS3-205ENST00000465596 LRRC59Q96AG4 307 aaKnown RBP11.01□□□□□ -0.65
THBS3-205ENST00000465596 COL18A1P39060 1754 aa11□□□□□ -0.65
THBS3-205ENST00000465596 RGPD5Q99666 1765 aa11□□□□□ -0.65
THBS3-205ENST00000465596 KIF20BQ96Q89 1820 aa11□□□□□ -0.65
THBS3-205ENST00000465596 PLEKHG3A1L390 1219 aa11□□□□□ -0.65
THBS3-205ENST00000465596 DISP3Q9P2K9 1392 aa11□□□□□ -0.65
THBS3-205ENST00000465596 COL14A1Q05707 1796 aaKnown RBP11□□□□□ -0.65
THBS3-205ENST00000465596 USP6P35125 1406 aa11□□□□□ -0.65
THBS3-205ENST00000465596 SLIT3O75094 1523 aa10.99□□□□□ -0.65
THBS3-205ENST00000465596 PMFBP1Q8TBY8 1022 aa10.99□□□□□ -0.65
THBS3-205ENST00000465596 CABP2Q9NPB3 220 aa10.99□□□□□ -0.65
THBS3-205ENST00000465596 CCDC61Q9Y6R9 512 aa10.99□□□□□ -0.65
THBS3-205ENST00000465596 LTN1O94822 1766 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms