RNA–Protein interactions for RNA: ENST00000465551.5

FXR1-206, Transcript of FMR1 autosomal homolog 1, human

TSL 4

Gene FXR1, Length 572 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FXR1-206	ENST00000465551	MEX3C	Q5U5Q3	659 aa	Known RBP	13.91	□□□□□ -0.18
FXR1-206	ENST00000465551	ZFYVE9	O95405	1425 aa		13.9	□□□□□ -0.18
FXR1-206	ENST00000465551	RIMS2	Q9UQ26	1411 aa		13.9	□□□□□ -0.18
FXR1-206	ENST00000465551	PAK3	O75914	559 aa	Predicted RBP	13.9	□□□□□ -0.18
FXR1-206	ENST00000465551	TSPYL2	Q9H2G4	693 aa	Predicted RBP	13.9	□□□□□ -0.18
FXR1-206	ENST00000465551	SHPRH	Q149N8	1683 aa		13.89	□□□□□ -0.19
FXR1-206	ENST00000465551	NKTR	P30414	1462 aa	Known RBP	13.89	□□□□□ -0.19
FXR1-206	ENST00000465551	PPP1R15A	O75807	674 aa	Predicted RBP	13.89	□□□□□ -0.19
FXR1-206	ENST00000465551	BCAN	Q96GW7	911 aa		13.89	□□□□□ -0.19
FXR1-206	ENST00000465551	TRPM2	O94759	1503 aa		13.89	□□□□□ -0.19
FXR1-206	ENST00000465551	DCAF8	Q5TAQ9	597 aa		13.88	□□□□□ -0.19
FXR1-206	ENST00000465551	FAM212A	Q96EL1	285 aa		13.88	□□□□□ -0.19
FXR1-206	ENST00000465551	NWD1	Q149M9	1564 aa		13.88	□□□□□ -0.19
FXR1-206	ENST00000465551	CHD2	O14647	1828 aa	Known RBP	13.87	□□□□□ -0.19
FXR1-206	ENST00000465551	SLC26A8	Q96RN1	970 aa		13.87	□□□□□ -0.19
FXR1-206	ENST00000465551	RGS12	O14924	1447 aa		13.87	□□□□□ -0.19
FXR1-206	ENST00000465551	SETBP1	Q9Y6X0	1596 aa		13.87	□□□□□ -0.19
FXR1-206	ENST00000465551	KCNA6	P17658	529 aa		13.86	□□□□□ -0.19
FXR1-206	ENST00000465551	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.86	□□□□□ -0.19
FXR1-206	ENST00000465551	SLAIN2	Q9P270	581 aa		13.86	□□□□□ -0.19
FXR1-206	ENST00000465551	MSH6	P52701	1360 aa		13.85	□□□□□ -0.19
FXR1-206	ENST00000465551	CIZ1	Q9ULV3	898 aa	Predicted RBP	13.85	□□□□□ -0.19
FXR1-206	ENST00000465551	ATAD2	Q6PL18	1390 aa		13.84	□□□□□ -0.19
FXR1-206	ENST00000465551	PLEKHG1	Q9ULL1	1385 aa		13.84	□□□□□ -0.19
FXR1-206	ENST00000465551	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.84	□□□□□ -0.19
FXR1-206	ENST00000465551	DIP2A	Q14689	1571 aa		13.83	□□□□□ -0.19
FXR1-206	ENST00000465551	GSE1	Q14687	1217 aa		13.83	□□□□□ -0.2
FXR1-206	ENST00000465551	NRXN3	Q9Y4C0	1643 aa		13.82	□□□□□ -0.2
FXR1-206	ENST00000465551	PROSER2	Q86WR7	435 aa	Predicted RBP	13.82	□□□□□ -0.2
FXR1-206	ENST00000465551	NEXMIF	Q5QGS0	1516 aa		13.81	□□□□□ -0.2
FXR1-206	ENST00000465551	RBM6	P78332	1123 aa	Known RBP	13.81	□□□□□ -0.2
FXR1-206	ENST00000465551	ZNF326	Q5BKZ1	582 aa	Known RBP	13.81	□□□□□ -0.2
FXR1-206	ENST00000465551	LRP5	O75197	1615 aa		13.81	□□□□□ -0.2
FXR1-206	ENST00000465551	HDGF	P51858	240 aa	Known RBP	13.8	□□□□□ -0.2
FXR1-206	ENST00000465551	EVX2	Q03828	476 aa		13.8	□□□□□ -0.2
FXR1-206	ENST00000465551	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
FXR1-206	ENST00000465551	AFF2	P51816	1311 aa		13.8	□□□□□ -0.2
FXR1-206	ENST00000465551	PPL	O60437	1756 aa		13.8	□□□□□ -0.2
FXR1-206	ENST00000465551	RBM33	Q96EV2	1170 aa	Known RBP	13.79	□□□□□ -0.2
FXR1-206	ENST00000465551	ADAMTS13	Q76LX8	1427 aa		13.79	□□□□□ -0.2
FXR1-206	ENST00000465551	NCOA3	Q9Y6Q9	1424 aa		13.78	□□□□□ -0.2
FXR1-206	ENST00000465551	EP400	Q96L91	3159 aa		13.77	□□□□□ -0.2
FXR1-206	ENST00000465551	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.77	□□□□□ -0.21
FXR1-206	ENST00000465551	NUTM2E	B1AL46	878 aa	Predicted RBP	13.77	□□□□□ -0.21
FXR1-206	ENST00000465551	CCDC125	Q86Z20	511 aa		13.77	□□□□□ -0.21
FXR1-206	ENST00000465551	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.77	□□□□□ -0.21
FXR1-206	ENST00000465551	XRN1	Q8IZH2	1706 aa	Known RBP	13.76	□□□□□ -0.21
FXR1-206	ENST00000465551	NGLY1	Q96IV0	654 aa		13.75	□□□□□ -0.21
FXR1-206	ENST00000465551	CCDC61	Q9Y6R9	512 aa		13.75	□□□□□ -0.21
FXR1-206	ENST00000465551	IFT172	Q9UG01	1749 aa		13.75	□□□□□ -0.21
FXR1-206	ENST00000465551	SETD5	Q9C0A6	1442 aa		13.74	□□□□□ -0.21
FXR1-206	ENST00000465551	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.73	□□□□□ -0.21
FXR1-206	ENST00000465551	QTRT2	Q9H974	415 aa	Known RBP	13.73	□□□□□ -0.21
FXR1-206	ENST00000465551	RAB3GAP2	Q9H2M9	1393 aa		13.72	□□□□□ -0.21
FXR1-206	ENST00000465551	ZNF579	Q8NAF0	562 aa	Known RBP	13.72	□□□□□ -0.21
FXR1-206	ENST00000465551	TBX22	Q9Y458	520 aa		13.72	□□□□□ -0.21
FXR1-206	ENST00000465551	CCDC144A	A2RUR9	1427 aa		13.72	□□□□□ -0.21
FXR1-206	ENST00000465551	PTPRU	Q92729	1446 aa		13.72	□□□□□ -0.21
FXR1-206	ENST00000465551	C14orf37	Q86TY3	774 aa		13.71	□□□□□ -0.21
FXR1-206	ENST00000465551	PHF12	Q96QT6	1004 aa		13.71	□□□□□ -0.21
FXR1-206	ENST00000465551	NALCN	Q8IZF0	1738 aa		13.7	□□□□□ -0.22
FXR1-206	ENST00000465551	MPHOSPH9	Q99550	1183 aa		13.7	□□□□□ -0.22
FXR1-206	ENST00000465551	PIK3R4	Q99570	1358 aa		13.7	□□□□□ -0.22
FXR1-206	ENST00000465551	PYGB	P11216	843 aa		13.69	□□□□□ -0.22
FXR1-206	ENST00000465551	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.69	□□□□□ -0.22
FXR1-206	ENST00000465551	NHSL1	Q5SYE7	1610 aa		13.68	□□□□□ -0.22
FXR1-206	ENST00000465551	CADPS2	Q86UW7	1296 aa		13.68	□□□□□ -0.22
FXR1-206	ENST00000465551	MET	P08581	1390 aa		13.68	□□□□□ -0.22
FXR1-206	ENST00000465551	AMOTL2	Q9Y2J4	779 aa		13.67	□□□□□ -0.22
FXR1-206	ENST00000465551	RGL3	Q3MIN7	710 aa		13.65	□□□□□ -0.22
FXR1-206	ENST00000465551	C8orf37	Q96NL8	207 aa		13.65	□□□□□ -0.22
FXR1-206	ENST00000465551	SPATA31E1	Q6ZUB1	1445 aa		13.64	□□□□□ -0.23
FXR1-206	ENST00000465551	ECM2	O94769	699 aa	Predicted RBP	13.64	□□□□□ -0.23
FXR1-206	ENST00000465551	RTN4	Q9NQC3	1192 aa	Known RBP	13.64	□□□□□ -0.23
FXR1-206	ENST00000465551	VGF	O15240	615 aa	Predicted RBP	13.63	□□□□□ -0.23
FXR1-206	ENST00000465551	IFFO2	Q5TF58	517 aa		13.63	□□□□□ -0.23
FXR1-206	ENST00000465551	C19orf44	Q9H6X5	657 aa		13.63	□□□□□ -0.23
FXR1-206	ENST00000465551	RPGRIP1L	Q68CZ1	1315 aa		13.63	□□□□□ -0.23
FXR1-206	ENST00000465551	ATF3	P18847	181 aa		13.62	□□□□□ -0.23
FXR1-206	ENST00000465551	BRINP3	Q76B58	766 aa		13.62	□□□□□ -0.23
FXR1-206	ENST00000465551	SP7	Q8TDD2	431 aa	Predicted RBP	13.62	□□□□□ -0.23
FXR1-206	ENST00000465551	LRRC59	Q96AG4	307 aa	Known RBP	13.62	□□□□□ -0.23
FXR1-206	ENST00000465551	KIF12	Q96FN5	646 aa		13.62	□□□□□ -0.23
FXR1-206	ENST00000465551	DCC	P43146	1447 aa		13.62	□□□□□ -0.23
FXR1-206	ENST00000465551	BLM	P54132	1417 aa	Predicted RBP	13.62	□□□□□ -0.23
FXR1-206	ENST00000465551	KNDC1	Q76NI1	1749 aa		13.61	□□□□□ -0.23
FXR1-206	ENST00000465551	ASXL1	Q8IXJ9	1541 aa		13.61	□□□□□ -0.23
FXR1-206	ENST00000465551	TRPC5	Q9UL62	973 aa	Predicted RBP	13.61	□□□□□ -0.23
FXR1-206	ENST00000465551	ACIN1	Q9UKV3	1341 aa	Known RBP	13.61	□□□□□ -0.23
FXR1-206	ENST00000465551	PNPLA6	Q8IY17	1366 aa		13.6	□□□□□ -0.23
FXR1-206	ENST00000465551	MAP3K13	O43283	966 aa		13.6	□□□□□ -0.23
FXR1-206	ENST00000465551	CHRM1	P11229	460 aa	Predicted RBP	13.6	□□□□□ -0.23
FXR1-206	ENST00000465551	PTCH1	Q13635	1447 aa		13.6	□□□□□ -0.23
FXR1-206	ENST00000465551	ADGRL3	Q9HAR2	1447 aa		13.6	□□□□□ -0.23
FXR1-206	ENST00000465551	LAMC1	P11047	1609 aa		13.6	□□□□□ -0.23
FXR1-206	ENST00000465551	ADGRF5	Q8IZF2	1346 aa		13.6	□□□□□ -0.23
FXR1-206	ENST00000465551	ANKRD30B	Q9BXX2	1392 aa		13.58	□□□□□ -0.23
FXR1-206	ENST00000465551	ATRN	O75882	1429 aa		13.58	□□□□□ -0.24
FXR1-206	ENST00000465551	ROBO2	Q9HCK4	1378 aa		13.58	□□□□□ -0.24
FXR1-206	ENST00000465551	PIK3C2G	O75747	1445 aa		13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms