RNA–Protein interactions for RNA: ENST00000465507.1

XRN1-205, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 322 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-205ENST00000465507 TRIM67Q6ZTA4 783 aa7.72□□□□□ -1.17
XRN1-205ENST00000465507 HOXA2O43364 376 aa7.71□□□□□ -1.18
XRN1-205ENST00000465507 ANKLE1Q8NAG6 615 aa7.71□□□□□ -1.18
XRN1-205ENST00000465507 SYMPKQ92797 1274 aaKnown RBP7.71□□□□□ -1.18
XRN1-205ENST00000465507 SLC27A5Q9Y2P5 690 aa7.71□□□□□ -1.18
XRN1-205ENST00000465507 TSC1Q92574 1164 aa7.7□□□□□ -1.18
XRN1-205ENST00000465507 DDRGK1Q96HY6 314 aa7.7□□□□□ -1.18
XRN1-205ENST00000465507 C6orf229H3BNL8 230 aa7.69□□□□□ -1.18
XRN1-205ENST00000465507 FDX1P10109 184 aa7.69□□□□□ -1.18
XRN1-205ENST00000465507 PLA2G2CQ5R387 149 aa7.69□□□□□ -1.18
XRN1-205ENST00000465507 MORN1Q5T089 497 aa7.69□□□□□ -1.18
XRN1-205ENST00000465507 SPRYD7Q5W111 196 aa7.69□□□□□ -1.18
XRN1-205ENST00000465507 LIAT1Q6ZQX7 453 aa7.69□□□□□ -1.18
XRN1-205ENST00000465507 SCUBE3Q8IX30 993 aa7.69□□□□□ -1.18
XRN1-205ENST00000465507 SLC6A16Q9GZN6 736 aa7.69□□□□□ -1.18
XRN1-205ENST00000465507 PLEKHG3A1L390 1219 aa7.68□□□□□ -1.18
XRN1-205ENST00000465507 MYSM1Q5VVJ2 828 aa7.68□□□□□ -1.18
XRN1-205ENST00000465507 RNF19BQ6ZMZ0 732 aa7.68□□□□□ -1.18
XRN1-205ENST00000465507 RIC3Q7Z5B4 369 aa7.67□□□□□ -1.18
XRN1-205ENST00000465507 SPSB2Q99619 263 aa7.67□□□□□ -1.18
XRN1-205ENST00000465507 NUTM2BA6NNL0 878 aaPredicted RBP7.66□□□□□ -1.18
XRN1-205ENST00000465507 NUTM2EB1AL46 878 aaPredicted RBP7.66□□□□□ -1.18
XRN1-205ENST00000465507 USP46P62068 366 aa7.66□□□□□ -1.18
XRN1-205ENST00000465507 ZNF697Q5TEC3 545 aa7.66□□□□□ -1.18
XRN1-205ENST00000465507 NUTM2DQ5VT03 806 aaPredicted RBP7.66□□□□□ -1.18
XRN1-205ENST00000465507 ZNF598Q86UK7 904 aaKnown RBP7.66□□□□□ -1.18
XRN1-205ENST00000465507 NUTM2AQ8IVF1 878 aaPredicted RBP7.66□□□□□ -1.18
XRN1-205ENST00000465507 LIMD1Q9UGP4 676 aa7.66□□□□□ -1.18
XRN1-205ENST00000465507 PCDHB15Q9Y5E8 787 aa7.66□□□□□ -1.18
XRN1-205ENST00000465507 FMNL1O95466 1100 aaPredicted RBP7.65□□□□□ -1.18
XRN1-205ENST00000465507 CLK2P49760 499 aaKnown RBP7.65□□□□□ -1.18
XRN1-205ENST00000465507 PROCA1Q8NCQ7 364 aaPredicted RBP7.65□□□□□ -1.18
XRN1-205ENST00000465507 CABLES1Q8TDN4 633 aa7.65□□□□□ -1.18
XRN1-205ENST00000465507 PCDHGC3Q9UN70 934 aa7.65□□□□□ -1.18
XRN1-205ENST00000465507 TNFRSF10AO00220 468 aa7.64□□□□□ -1.19
XRN1-205ENST00000465507 DIXDC1Q155Q3 683 aa7.64□□□□□ -1.19
XRN1-205ENST00000465507 RSBN1LQ6PCB5 846 aaPredicted RBP7.64□□□□□ -1.19
XRN1-205ENST00000465507 RSPH6AQ9H0K4 717 aa7.64□□□□□ -1.19
XRN1-205ENST00000465507 PRDM9Q9NQV7 894 aa7.64□□□□□ -1.19
XRN1-205ENST00000465507 PRR20EP86478 221 aa7.63□□□□□ -1.19
XRN1-205ENST00000465507 PRR20CP86479 221 aa7.63□□□□□ -1.19
XRN1-205ENST00000465507 PRR20DP86480 221 aa7.63□□□□□ -1.19
XRN1-205ENST00000465507 PRR20BP86481 221 aa7.63□□□□□ -1.19
XRN1-205ENST00000465507 PRR20AP86496 221 aa7.63□□□□□ -1.19
XRN1-205ENST00000465507 THAP11Q96EK4 314 aa7.63□□□□□ -1.19
XRN1-205ENST00000465507 GDF9O60383 454 aa7.62□□□□□ -1.19
XRN1-205ENST00000465507 Q3C1V9 767 aa7.62□□□□□ -1.19
XRN1-205ENST00000465507 PCMTD1Q96MG8 357 aaPredicted RBP7.62□□□□□ -1.19
XRN1-205ENST00000465507 QPCTQ16769 361 aa7.61□□□□□ -1.19
XRN1-205ENST00000465507 PKDCCQ504Y2 493 aa7.61□□□□□ -1.19
XRN1-205ENST00000465507 FAM160A2Q8N612 972 aaPredicted RBP7.61□□□□□ -1.19
XRN1-205ENST00000465507 FCF1Q9Y324 198 aaKnown RBP7.61□□□□□ -1.19
XRN1-205ENST00000465507 FAM187AA6NFU0 413 aa7.6□□□□□ -1.19
XRN1-205ENST00000465507 SPTLC1O15269 473 aa7.6□□□□□ -1.19
XRN1-205ENST00000465507 HRCP23327 699 aa7.6□□□□□ -1.19
XRN1-205ENST00000465507 MTMR2Q13614 643 aa7.6□□□□□ -1.19
XRN1-205ENST00000465507 SKIV2LQ15477 1246 aaKnown RBP7.6□□□□□ -1.19
XRN1-205ENST00000465507 SH3D19Q5HYK7 790 aa7.6□□□□□ -1.19
XRN1-205ENST00000465507 ZNF787Q6DD87 383 aa7.6□□□□□ -1.19
XRN1-205ENST00000465507 CCDC24Q8N4L8 307 aa7.6□□□□□ -1.19
XRN1-205ENST00000465507 USB1Q9BQ65 265 aaKnown RBP7.6□□□□□ -1.19
XRN1-205ENST00000465507 MYT1Q01538 1121 aa7.59□□□□□ -1.19
XRN1-205ENST00000465507 PRR7Q8TB68 274 aa7.59□□□□□ -1.19
XRN1-205ENST00000465507 ZBTB3Q9H5J0 574 aa7.59□□□□□ -1.19
XRN1-205ENST00000465507 DGAT1O75907 488 aa7.58□□□□□ -1.2
XRN1-205ENST00000465507 FOXC1Q12948 553 aa7.58□□□□□ -1.2
XRN1-205ENST00000465507 RTL5Q5HYW3 569 aaPredicted RBP7.58□□□□□ -1.2
XRN1-205ENST00000465507 BRICD5Q6PL45 260 aa7.58□□□□□ -1.2
XRN1-205ENST00000465507 PKD2L1Q9P0L9 805 aa7.58□□□□□ -1.2
XRN1-205ENST00000465507 CFAP99D6REC4 459 aa7.56□□□□□ -1.2
XRN1-205ENST00000465507 FBXO31Q5XUX0 539 aaPredicted RBP7.56□□□□□ -1.2
XRN1-205ENST00000465507 RETREG3Q86VR2 466 aa7.56□□□□□ -1.2
XRN1-205ENST00000465507 AP1G2O75843 785 aa7.55□□□□□ -1.2
XRN1-205ENST00000465507 RPIAP49247 311 aa7.55□□□□□ -1.2
XRN1-205ENST00000465507 MSS51Q4VC12 460 aa7.55□□□□□ -1.2
XRN1-205ENST00000465507 SALL2Q9Y467 1007 aaPredicted RBP7.55□□□□□ -1.2
XRN1-205ENST00000465507 ST8SIA5O15466 376 aa7.54□□□□□ -1.2
XRN1-205ENST00000465507 POTECB2RU33 542 aa7.53□□□□□ -1.2
XRN1-205ENST00000465507 LILRB3O75022 631 aa7.53□□□□□ -1.2
XRN1-205ENST00000465507 JUNDP17535 347 aa7.52□□□□□ -1.21
XRN1-205ENST00000465507 CTHP32929 405 aa7.52□□□□□ -1.21
XRN1-205ENST00000465507 ZNF775Q96BV0 537 aaPredicted RBP7.52□□□□□ -1.21
XRN1-205ENST00000465507 PRPF38BQ5VTL8 546 aaKnown RBP7.51□□□□□ -1.21
XRN1-205ENST00000465507 HELBQ8NG08 1087 aaPredicted RBP7.51□□□□□ -1.21
XRN1-205ENST00000465507 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.51□□□□□ -1.21
XRN1-205ENST00000465507 SPDYE5A6NIY4 337 aa7.5□□□□□ -1.21
XRN1-205ENST00000465507 PER1O15534 1290 aaPredicted RBP7.5□□□□□ -1.21
XRN1-205ENST00000465507 CD2BP2O95400 341 aaKnown RBP7.5□□□□□ -1.21
XRN1-205ENST00000465507 GJA5P36382 358 aa7.5□□□□□ -1.21
XRN1-205ENST00000465507 RFC5P40937 340 aa7.5□□□□□ -1.21
XRN1-205ENST00000465507 CTDSPL2Q05D32 466 aa7.5□□□□□ -1.21
XRN1-205ENST00000465507 NUDT12Q9BQG2 462 aa7.5□□□□□ -1.21
XRN1-205ENST00000465507 AAASQ9NRG9 546 aa7.5□□□□□ -1.21
XRN1-205ENST00000465507 TOR4AQ9NXH8 423 aa7.5□□□□□ -1.21
XRN1-205ENST00000465507 ZBTB24O43167 697 aaPredicted RBP7.49□□□□□ -1.21
XRN1-205ENST00000465507 MMP16P51512 607 aa7.49□□□□□ -1.21
XRN1-205ENST00000465507 TMEM132AQ24JP5 1023 aa7.49□□□□□ -1.21
XRN1-205ENST00000465507 CYP4X1Q8N118 509 aa7.49□□□□□ -1.21
XRN1-205ENST00000465507 DXOO77932 396 aaKnown RBP7.48□□□□□ -1.21
XRN1-205ENST00000465507 TRIM32Q13049 653 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms