RNA–Protein interactions for RNA: ENST00000465223.1

NCSTN-210, Transcript of nicastrin, humanhuman

TSL 2

Gene NCSTN, Length 545 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-210ENST00000465223 HRCP23327 699 aa23.59■■□□□ 1.37
NCSTN-210ENST00000465223 ZNF326Q5BKZ1 582 aaKnown RBP23.56■■□□□ 1.36
NCSTN-210ENST00000465223 SPHKAPQ2M3C7 1700 aa23.56■■□□□ 1.36
NCSTN-210ENST00000465223 UNC5CLQ8IV45 518 aa23.54■■□□□ 1.36
NCSTN-210ENST00000465223 XPCQ01831 940 aaPredicted RBP23.53■■□□□ 1.36
NCSTN-210ENST00000465223 PXDNQ92626 1479 aa23.52■■□□□ 1.36
NCSTN-210ENST00000465223 SEPT12Q8IYM1 358 aa23.52■■□□□ 1.36
NCSTN-210ENST00000465223 ROBO2Q9HCK4 1378 aa23.52■■□□□ 1.36
NCSTN-210ENST00000465223 SLIT2O94813 1529 aa23.51■■□□□ 1.35
NCSTN-210ENST00000465223 FAM50AQ14320 339 aaKnown RBP23.51■■□□□ 1.35
NCSTN-210ENST00000465223 NPHP3Q7Z494 1330 aa23.49■■□□□ 1.35
NCSTN-210ENST00000465223 ESCO1Q5FWF5 840 aa23.48■■□□□ 1.35
NCSTN-210ENST00000465223 NEXMIFQ5QGS0 1516 aa23.48■■□□□ 1.35
NCSTN-210ENST00000465223 APLP2Q06481 763 aa23.46■■□□□ 1.35
NCSTN-210ENST00000465223 FOXO3O43524 673 aa23.45■■□□□ 1.34
NCSTN-210ENST00000465223 NUP155O75694 1391 aa23.44■■□□□ 1.34
NCSTN-210ENST00000465223 LOC105371045A0A1W2PR82 267 aa23.44■■□□□ 1.34
NCSTN-210ENST00000465223 BAG6P46379 1132 aa23.44■■□□□ 1.34
NCSTN-210ENST00000465223 KRT27Q7Z3Y8 459 aa23.44■■□□□ 1.34
NCSTN-210ENST00000465223 YY1P25490 414 aa23.43■■□□□ 1.34
NCSTN-210ENST00000465223 R3HDM1Q15032 1099 aaKnown RBP23.41■■□□□ 1.34
NCSTN-210ENST00000465223 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
NCSTN-210ENST00000465223 EN1Q05925 392 aaPredicted RBP23.39■■□□□ 1.33
NCSTN-210ENST00000465223 VPS72Q15906 364 aa23.39■■□□□ 1.33
NCSTN-210ENST00000465223 ONECUT3O60422 494 aaPredicted RBP23.38■■□□□ 1.33
NCSTN-210ENST00000465223 CCDC9Q9Y3X0 531 aaKnown RBP23.38■■□□□ 1.33
NCSTN-210ENST00000465223 PLCH1Q4KWH8 1693 aa23.38■■□□□ 1.33
NCSTN-210ENST00000465223 CLTCL1P53675 1640 aa23.37■■□□□ 1.33
NCSTN-210ENST00000465223 CDC42BPGQ6DT37 1551 aa23.37■■□□□ 1.33
NCSTN-210ENST00000465223 NUTM2FA1L443 756 aa23.37■■□□□ 1.33
NCSTN-210ENST00000465223 HFM1A2PYH4 1435 aa23.36■■□□□ 1.33
NCSTN-210ENST00000465223 PRAG1Q86YV5 1406 aa23.35■■□□□ 1.33
NCSTN-210ENST00000465223 SPATA31A3Q5VYP0 1347 aa23.34■■□□□ 1.33
NCSTN-210ENST00000465223 LRPPRCP42704 1394 aaKnown RBP23.34■■□□□ 1.33
NCSTN-210ENST00000465223 A0A0G2JS52 829 aa23.33■■□□□ 1.33
NCSTN-210ENST00000465223 PLEKHG5O94827 1062 aa23.33■■□□□ 1.33
NCSTN-210ENST00000465223 MYT1Q01538 1121 aa23.33■■□□□ 1.33
NCSTN-210ENST00000465223 RGPD1P0DJD0 1748 aa23.33■■□□□ 1.32
NCSTN-210ENST00000465223 NWD2Q9ULI1 1742 aa23.33■■□□□ 1.32
NCSTN-210ENST00000465223 KIF1BO60333 1816 aa23.32■■□□□ 1.32
NCSTN-210ENST00000465223 CABLES1Q8TDN4 633 aa23.31■■□□□ 1.32
NCSTN-210ENST00000465223 HAP1P54257 671 aaPredicted RBP23.3■■□□□ 1.32
NCSTN-210ENST00000465223 FAM182BQ5T319 152 aa23.3■■□□□ 1.32
NCSTN-210ENST00000465223 ROCK1Q13464 1354 aa23.28■■□□□ 1.32
NCSTN-210ENST00000465223 NAIPQ13075 1403 aa23.28■■□□□ 1.32
NCSTN-210ENST00000465223 EZH2Q15910 746 aaKnown RBP23.27■■□□□ 1.32
NCSTN-210ENST00000465223 FAM98CQ17RN3 349 aaKnown RBP23.27■■□□□ 1.32
NCSTN-210ENST00000465223 TNS1Q9HBL0 1735 aaKnown RBP23.27■■□□□ 1.32
NCSTN-210ENST00000465223 KRT28Q7Z3Y7 464 aa23.26■■□□□ 1.31
NCSTN-210ENST00000465223 VGFO15240 615 aaPredicted RBP23.25■■□□□ 1.31
NCSTN-210ENST00000465223 ABCA3Q99758 1704 aa23.25■■□□□ 1.31
NCSTN-210ENST00000465223 CCDC144AA2RUR9 1427 aa23.23■■□□□ 1.31
NCSTN-210ENST00000465223 KIF1AQ12756 1690 aa23.22■■□□□ 1.31
NCSTN-210ENST00000465223 NRAPQ86VF7 1730 aa23.22■■□□□ 1.31
NCSTN-210ENST00000465223 WAPLQ7Z5K2 1190 aa23.22■■□□□ 1.31
NCSTN-210ENST00000465223 FAM83GA6ND36 823 aa23.21■■□□□ 1.31
NCSTN-210ENST00000465223 DISP2A7MBM2 1401 aa23.21■■□□□ 1.31
NCSTN-210ENST00000465223 TNS3Q68CZ2 1445 aa23.21■■□□□ 1.31
NCSTN-210ENST00000465223 FMN2Q9NZ56 1722 aa23.21■■□□□ 1.31
NCSTN-210ENST00000465223 RGPD8O14715 1765 aaPredicted RBP23.19■■□□□ 1.3
NCSTN-210ENST00000465223 STK26Q9P289 416 aa23.18■■□□□ 1.3
NCSTN-210ENST00000465223 PPLO60437 1756 aa23.18■■□□□ 1.3
NCSTN-210ENST00000465223 ITGAEP38570 1179 aa23.17■■□□□ 1.3
NCSTN-210ENST00000465223 CAMKK2Q96RR4 588 aa23.17■■□□□ 1.3
NCSTN-210ENST00000465223 PLEKHH1Q9ULM0 1364 aa23.16■■□□□ 1.3
NCSTN-210ENST00000465223 LMOD2Q6P5Q4 547 aa23.16■■□□□ 1.3
NCSTN-210ENST00000465223 BTG4Q9NY30 223 aa23.14■■□□□ 1.29
NCSTN-210ENST00000465223 TRIM37O94972 964 aa23.12■■□□□ 1.29
NCSTN-210ENST00000465223 PSME1Q06323 249 aa23.12■■□□□ 1.29
NCSTN-210ENST00000465223 THSD7AQ9UPZ6 1657 aa23.12■■□□□ 1.29
NCSTN-210ENST00000465223 CAMTA1Q9Y6Y1 1673 aa23.12■■□□□ 1.29
NCSTN-210ENST00000465223 RPGRIP1LQ68CZ1 1315 aa23.11■■□□□ 1.29
NCSTN-210ENST00000465223 ADGRB2O60241 1585 aa23.11■■□□□ 1.29
NCSTN-210ENST00000465223 PHF8Q9UPP1 1060 aa23.11■■□□□ 1.29
NCSTN-210ENST00000465223 TECPR2O15040 1411 aa23.1■■□□□ 1.29
NCSTN-210ENST00000465223 RREB1Q92766 1687 aa23.09■■□□□ 1.29
NCSTN-210ENST00000465223 NUP188Q5SRE5 1749 aa23.09■■□□□ 1.29
NCSTN-210ENST00000465223 IFT172Q9UG01 1749 aa23.09■■□□□ 1.29
NCSTN-210ENST00000465223 PPP1R1BQ9UD71 204 aaPredicted RBP23.09■■□□□ 1.29
NCSTN-210ENST00000465223 SBNO1A3KN83 1393 aa23.09■■□□□ 1.29
NCSTN-210ENST00000465223 DCAF8L1A6NGE4 600 aa23.08■■□□□ 1.29
NCSTN-210ENST00000465223 APBA3O96018 575 aa23.08■■□□□ 1.29
NCSTN-210ENST00000465223 SPATA31A5Q5VU36 1347 aa23.08■■□□□ 1.28
NCSTN-210ENST00000465223 SPATA31A7Q8IWB4 1347 aa23.08■■□□□ 1.28
NCSTN-210ENST00000465223 COL14A1Q05707 1796 aaKnown RBP23.07■■□□□ 1.28
NCSTN-210ENST00000465223 ARHGEF10O15013 1369 aa23.07■■□□□ 1.28
NCSTN-210ENST00000465223 IFFO2Q5TF58 517 aa23.07■■□□□ 1.28
NCSTN-210ENST00000465223 KNDC1Q76NI1 1749 aa23.07■■□□□ 1.28
NCSTN-210ENST00000465223 ADGRF5Q8IZF2 1346 aa23.06■■□□□ 1.28
NCSTN-210ENST00000465223 SENP3-EIF4A1A0A087X0R7 540 aa23.05■■□□□ 1.28
NCSTN-210ENST00000465223 TMEM132EQ6IEE7 984 aa23.05■■□□□ 1.28
NCSTN-210ENST00000465223 NRXN1Q9ULB1 1477 aa23.05■■□□□ 1.28
NCSTN-210ENST00000465223 PARD3Q8TEW0 1356 aa23.03■■□□□ 1.28
NCSTN-210ENST00000465223 ABCC11Q96J66 1382 aa23.03■■□□□ 1.28
NCSTN-210ENST00000465223 NINLQ9Y2I6 1382 aa23.03■■□□□ 1.28
NCSTN-210ENST00000465223 SPON1Q9HCB6 807 aa23.03■■□□□ 1.28
NCSTN-210ENST00000465223 KCNQ2O43526 872 aa23.02■■□□□ 1.28
NCSTN-210ENST00000465223 FAM196AQ6ZSG2 479 aa23.02■■□□□ 1.28
NCSTN-210ENST00000465223 ZNF784Q8NCA9 323 aaPredicted RBP23.02■■□□□ 1.28
NCSTN-210ENST00000465223 NBPF8Q3BBV2 869 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms