RNA–Protein interactions for RNA: ENST00000464976.1

RAPGEF4-206, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 1 (best)

Gene RAPGEF4, Length 980 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-206ENST00000464976 TMEM259Q4ZIN3 620 aa9.51□□□□□ -0.89
RAPGEF4-206ENST00000464976 RTL5Q5HYW3 569 aaPredicted RBP9.51□□□□□ -0.89
RAPGEF4-206ENST00000464976 PRPF38BQ5VTL8 546 aaKnown RBP9.51□□□□□ -0.89
RAPGEF4-206ENST00000464976 ZMYND15Q9H091 742 aa9.51□□□□□ -0.89
RAPGEF4-206ENST00000464976 C6orf229H3BNL8 230 aa9.5□□□□□ -0.89
RAPGEF4-206ENST00000464976 HRCP23327 699 aa9.5□□□□□ -0.89
RAPGEF4-206ENST00000464976 MCM6Q14566 821 aa9.5□□□□□ -0.89
RAPGEF4-206ENST00000464976 AP1G2O75843 785 aa9.49□□□□□ -0.89
RAPGEF4-206ENST00000464976 UBTFP17480 764 aaKnown RBP9.49□□□□□ -0.89
RAPGEF4-206ENST00000464976 MTMR2Q13614 643 aa9.49□□□□□ -0.89
RAPGEF4-206ENST00000464976 APLP1P51693 650 aa9.48□□□□□ -0.89
RAPGEF4-206ENST00000464976 BANK1Q8NDB2 785 aa9.48□□□□□ -0.89
RAPGEF4-206ENST00000464976 TSC1Q92574 1164 aa9.48□□□□□ -0.89
RAPGEF4-206ENST00000464976 SUPT5HO00267 1087 aaKnown RBP9.47□□□□□ -0.89
RAPGEF4-206ENST00000464976 MORN1Q5T089 497 aa9.47□□□□□ -0.89
RAPGEF4-206ENST00000464976 SNRKQ9NRH2 765 aa9.47□□□□□ -0.89
RAPGEF4-206ENST00000464976 WBP1LQ9NX94 342 aa9.47□□□□□ -0.89
RAPGEF4-206ENST00000464976 SYMPKQ92797 1274 aaKnown RBP9.46□□□□□ -0.9
RAPGEF4-206ENST00000464976 PLA2G2EQ9NZK7 142 aa9.46□□□□□ -0.9
RAPGEF4-206ENST00000464976 SLC27A5Q9Y2P5 690 aa9.46□□□□□ -0.9
RAPGEF4-206ENST00000464976 PCDHB3Q9Y5E6 796 aa9.46□□□□□ -0.9
RAPGEF4-206ENST00000464976 SPDYE5A6NIY4 337 aa9.45□□□□□ -0.9
RAPGEF4-206ENST00000464976 Q3C1V9 767 aa9.45□□□□□ -0.9
RAPGEF4-206ENST00000464976 THSD4Q6ZMP0 1018 aa9.45□□□□□ -0.9
RAPGEF4-206ENST00000464976 HELBQ8NG08 1087 aaPredicted RBP9.44□□□□□ -0.9
RAPGEF4-206ENST00000464976 CLUAP1Q96AJ1 413 aa9.44□□□□□ -0.9
RAPGEF4-206ENST00000464976 RAD21O60216 631 aa9.43□□□□□ -0.9
RAPGEF4-206ENST00000464976 CFAP99D6REC4 459 aa9.42□□□□□ -0.9
RAPGEF4-206ENST00000464976 NR1I2O75469 434 aa9.42□□□□□ -0.9
RAPGEF4-206ENST00000464976 USP17L8P0C7I0 530 aa9.41□□□□□ -0.9
RAPGEF4-206ENST00000464976 PTPN5P54829 565 aa9.41□□□□□ -0.9
RAPGEF4-206ENST00000464976 BLOC1S3Q6QNY0 202 aa9.41□□□□□ -0.9
RAPGEF4-206ENST00000464976 PRR7Q8TB68 274 aa9.41□□□□□ -0.9
RAPGEF4-206ENST00000464976 COPS2P61201 443 aa9.4□□□□□ -0.9
RAPGEF4-206ENST00000464976 CTDSPL2Q05D32 466 aa9.4□□□□□ -0.9
RAPGEF4-206ENST00000464976 RETREG3Q86VR2 466 aa9.4□□□□□ -0.9
RAPGEF4-206ENST00000464976 SCUBE3Q8IX30 993 aa9.4□□□□□ -0.9
RAPGEF4-206ENST00000464976 MTMR14Q8NCE2 650 aa9.4□□□□□ -0.9
RAPGEF4-206ENST00000464976 APBB1O00213 710 aa9.39□□□□□ -0.91
RAPGEF4-206ENST00000464976 RNF19BQ6ZMZ0 732 aa9.39□□□□□ -0.91
RAPGEF4-206ENST00000464976 POM121Q96HA1 1249 aa9.39□□□□□ -0.91
RAPGEF4-206ENST00000464976 FMNL1O95466 1100 aaPredicted RBP9.38□□□□□ -0.91
RAPGEF4-206ENST00000464976 PRM3Q9NNZ6 103 aa9.38□□□□□ -0.91
RAPGEF4-206ENST00000464976 A6NJR5 290 aa9.37□□□□□ -0.91
RAPGEF4-206ENST00000464976 BRICD5Q6PL45 260 aa9.37□□□□□ -0.91
RAPGEF4-206ENST00000464976 NYAP1Q6ZVC0 841 aa9.37□□□□□ -0.91
RAPGEF4-206ENST00000464976 USB1Q9BQ65 265 aaKnown RBP9.37□□□□□ -0.91
RAPGEF4-206ENST00000464976 LRRN4Q8WUT4 740 aa9.36□□□□□ -0.91
RAPGEF4-206ENST00000464976 COG6Q9Y2V7 657 aa9.36□□□□□ -0.91
RAPGEF4-206ENST00000464976 SALL2Q9Y467 1007 aaPredicted RBP9.36□□□□□ -0.91
RAPGEF4-206ENST00000464976 PROSER2Q86WR7 435 aaPredicted RBP9.35□□□□□ -0.91
RAPGEF4-206ENST00000464976 GDPD2Q9HCC8 539 aa9.35□□□□□ -0.91
RAPGEF4-206ENST00000464976 TRAK2O60296 914 aa9.33□□□□□ -0.92
RAPGEF4-206ENST00000464976 ABL2P42684 1182 aa9.33□□□□□ -0.92
RAPGEF4-206ENST00000464976 THAP11Q96EK4 314 aa9.33□□□□□ -0.92
RAPGEF4-206ENST00000464976 HMX1Q9NP08 348 aaPredicted RBP9.33□□□□□ -0.92
RAPGEF4-206ENST00000464976 CCDC180Q9P1Z9 1646 aa9.32□□□□□ -0.92
RAPGEF4-206ENST00000464976 ARID3CA6NKF2 412 aa9.32□□□□□ -0.92
RAPGEF4-206ENST00000464976 SOCS7O14512 581 aa9.32□□□□□ -0.92
RAPGEF4-206ENST00000464976 PER1O15534 1290 aaPredicted RBP9.32□□□□□ -0.92
RAPGEF4-206ENST00000464976 DESI1Q6ICB0 168 aa9.32□□□□□ -0.92
RAPGEF4-206ENST00000464976 WWC1Q8IX03 1113 aa9.32□□□□□ -0.92
RAPGEF4-206ENST00000464976 SPSB2Q99619 263 aa9.32□□□□□ -0.92
RAPGEF4-206ENST00000464976 MTRQ99707 1265 aa9.32□□□□□ -0.92
RAPGEF4-206ENST00000464976 TBC1D2BQ9UPU7 963 aa9.32□□□□□ -0.92
RAPGEF4-206ENST00000464976 NDUFB9Q9Y6M9 179 aa9.31□□□□□ -0.92
RAPGEF4-206ENST00000464976 ZPR1O75312 459 aa9.3□□□□□ -0.92
RAPGEF4-206ENST00000464976 GJD4Q96KN9 370 aaPredicted RBP9.3□□□□□ -0.92
RAPGEF4-206ENST00000464976 TLL1O43897 1013 aa9.29□□□□□ -0.92
RAPGEF4-206ENST00000464976 JUNDP17535 347 aa9.29□□□□□ -0.92
RAPGEF4-206ENST00000464976 NR6A1Q15406 480 aa9.29□□□□□ -0.92
RAPGEF4-206ENST00000464976 LYPD8Q6UX82 237 aa9.29□□□□□ -0.92
RAPGEF4-206ENST00000464976 ZNF777Q9ULD5 760 aaPredicted RBP9.29□□□□□ -0.92
RAPGEF4-206ENST00000464976 ZNF330Q9Y3S2 320 aaPredicted RBP9.29□□□□□ -0.92
RAPGEF4-206ENST00000464976 IFFO2Q5TF58 517 aa9.28□□□□□ -0.92
RAPGEF4-206ENST00000464976 EPS8L1Q8TE68 723 aa9.28□□□□□ -0.92
RAPGEF4-206ENST00000464976 TRIM34Q9BYJ4 488 aa9.28□□□□□ -0.92
RAPGEF4-206ENST00000464976 IL21Q9HBE4 155 aa9.28□□□□□ -0.92
RAPGEF4-206ENST00000464976 MSS51Q4VC12 460 aa9.27□□□□□ -0.93
RAPGEF4-206ENST00000464976 TJAP1Q5JTD0 557 aa9.27□□□□□ -0.93
RAPGEF4-206ENST00000464976 FNBP4Q8N3X1 1017 aaPredicted RBP9.27□□□□□ -0.93
RAPGEF4-206ENST00000464976 FAM160A2Q8N612 972 aaPredicted RBP9.27□□□□□ -0.93
RAPGEF4-206ENST00000464976 ZNF516Q92618 1163 aa9.27□□□□□ -0.93
RAPGEF4-206ENST00000464976 ADH1BP00325 375 aa9.26□□□□□ -0.93
RAPGEF4-206ENST00000464976 CTHP32929 405 aa9.26□□□□□ -0.93
RAPGEF4-206ENST00000464976 PRDM9Q9NQV7 894 aa9.26□□□□□ -0.93
RAPGEF4-206ENST00000464976 PTPRNQ16849 979 aa9.25□□□□□ -0.93
RAPGEF4-206ENST00000464976 ARID3AQ99856 593 aa9.25□□□□□ -0.93
RAPGEF4-206ENST00000464976 DXOO77932 396 aaKnown RBP9.24□□□□□ -0.93
RAPGEF4-206ENST00000464976 PNMA1Q8ND90 353 aa9.24□□□□□ -0.93
RAPGEF4-206ENST00000464976 C1orf115Q9H7X2 142 aa9.24□□□□□ -0.93
RAPGEF4-206ENST00000464976 NUDT12Q9BQG2 462 aa9.23□□□□□ -0.93
RAPGEF4-206ENST00000464976 SLC6A16Q9GZN6 736 aa9.23□□□□□ -0.93
RAPGEF4-206ENST00000464976 CCNYL3P0C7X3 344 aa9.22□□□□□ -0.93
RAPGEF4-206ENST00000464976 CCDC24Q8N4L8 307 aa9.22□□□□□ -0.93
RAPGEF4-206ENST00000464976 MAP10Q9P2G4 905 aa9.22□□□□□ -0.93
RAPGEF4-206ENST00000464976 MMP16P51512 607 aa9.21□□□□□ -0.94
RAPGEF4-206ENST00000464976 IRF5Q13568 498 aa9.21□□□□□ -0.94
RAPGEF4-206ENST00000464976 NKX2-3Q8TAU0 364 aa9.21□□□□□ -0.94
RAPGEF4-206ENST00000464976 A0A0G2JS52 829 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms