RNA–Protein interactions for RNA: ENST00000464812.1

NUDCD3-204, Transcript of NudC domain containing 3, humanhuman

TSL 5

Gene NUDCD3, Length 811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-204ENST00000464812 ROBO1Q9Y6N7 1651 aa12.73□□□□□ -0.37
NUDCD3-204ENST00000464812 LRPPRCP42704 1394 aaKnown RBP12.73□□□□□ -0.37
NUDCD3-204ENST00000464812 HSPA1LP34931 641 aa12.73□□□□□ -0.37
NUDCD3-204ENST00000464812 PIP4K2BP78356 416 aa12.73□□□□□ -0.37
NUDCD3-204ENST00000464812 NCOA3Q9Y6Q9 1424 aa12.72□□□□□ -0.37
NUDCD3-204ENST00000464812 HSPA5P11021 654 aaKnown RBP12.72□□□□□ -0.37
NUDCD3-204ENST00000464812 CACNB1Q02641 598 aaPredicted RBP12.72□□□□□ -0.37
NUDCD3-204ENST00000464812 HIRIP3Q9BW71 556 aaPredicted RBP12.71□□□□□ -0.37
NUDCD3-204ENST00000464812 MST1RQ04912 1400 aa12.71□□□□□ -0.38
NUDCD3-204ENST00000464812 ADGRL3Q9HAR2 1447 aa12.71□□□□□ -0.38
NUDCD3-204ENST00000464812 TRAK1Q9UPV9 953 aa12.7□□□□□ -0.38
NUDCD3-204ENST00000464812 TULP4Q9NRJ4 1543 aa12.7□□□□□ -0.38
NUDCD3-204ENST00000464812 FAM135BQ49AJ0 1406 aa12.7□□□□□ -0.38
NUDCD3-204ENST00000464812 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
NUDCD3-204ENST00000464812 TOM1O60784 492 aa12.69□□□□□ -0.38
NUDCD3-204ENST00000464812 STK26Q9P289 416 aa12.69□□□□□ -0.38
NUDCD3-204ENST00000464812 MYOM1P52179 1685 aa12.69□□□□□ -0.38
NUDCD3-204ENST00000464812 ADGRB2O60241 1585 aa12.69□□□□□ -0.38
NUDCD3-204ENST00000464812 EIF4G2P78344 907 aaKnown RBP eCLIP12.68□□□□□ -0.38
NUDCD3-204ENST00000464812 WAPLQ7Z5K2 1190 aa12.68□□□□□ -0.38
NUDCD3-204ENST00000464812 MSH6P52701 1360 aa12.68□□□□□ -0.38
NUDCD3-204ENST00000464812 EIF3AQ14152 1382 aaKnown RBP12.68□□□□□ -0.38
NUDCD3-204ENST00000464812 ST20-MTHFSA0A0A6YYL1 179 aa12.67□□□□□ -0.38
NUDCD3-204ENST00000464812 C19orf44Q9H6X5 657 aa12.67□□□□□ -0.38
NUDCD3-204ENST00000464812 COL16A1Q07092 1604 aaPredicted RBP12.66□□□□□ -0.38
NUDCD3-204ENST00000464812 DCCP43146 1447 aa12.66□□□□□ -0.38
NUDCD3-204ENST00000464812 TESK2Q96S53 571 aa12.66□□□□□ -0.38
NUDCD3-204ENST00000464812 SLAIN2Q9P270 581 aa12.66□□□□□ -0.38
NUDCD3-204ENST00000464812 DISP3Q9P2K9 1392 aa12.66□□□□□ -0.38
NUDCD3-204ENST00000464812 DCAF8L1A6NGE4 600 aa12.65□□□□□ -0.38
NUDCD3-204ENST00000464812 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
NUDCD3-204ENST00000464812 CDC42BPGQ6DT37 1551 aa12.64□□□□□ -0.39
NUDCD3-204ENST00000464812 CENPJQ9HC77 1338 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-204ENST00000464812 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-204ENST00000464812 PRAM1Q96QH2 718 aa12.64□□□□□ -0.39
NUDCD3-204ENST00000464812 FMN2Q9NZ56 1722 aa12.64□□□□□ -0.39
NUDCD3-204ENST00000464812 TOPAZ1Q8N9V7 1692 aa12.64□□□□□ -0.39
NUDCD3-204ENST00000464812 RGPD8O14715 1765 aaPredicted RBP12.64□□□□□ -0.39
NUDCD3-204ENST00000464812 NHSL1Q5SYE7 1610 aa12.63□□□□□ -0.39
NUDCD3-204ENST00000464812 AHDC1Q5TGY3 1603 aaPredicted RBP12.63□□□□□ -0.39
NUDCD3-204ENST00000464812 USP32Q8NFA0 1604 aa12.63□□□□□ -0.39
NUDCD3-204ENST00000464812 SAFB2Q14151 953 aaKnown RBP eCLIP12.63□□□□□ -0.39
NUDCD3-204ENST00000464812 BRINP3Q76B58 766 aa12.63□□□□□ -0.39
NUDCD3-204ENST00000464812 C1orf167Q5SNV9 1468 aa12.63□□□□□ -0.39
NUDCD3-204ENST00000464812 DDX17Q92841 729 aaKnown RBP12.62□□□□□ -0.39
NUDCD3-204ENST00000464812 PHLPP1O60346 1717 aa12.61□□□□□ -0.39
NUDCD3-204ENST00000464812 ZNF316A6NFI3 1004 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-204ENST00000464812 CADPS2Q86UW7 1296 aa12.6□□□□□ -0.39
NUDCD3-204ENST00000464812 SIRT1Q96EB6 747 aa12.6□□□□□ -0.39
NUDCD3-204ENST00000464812 ORAI2Q96SN7 254 aa12.6□□□□□ -0.39
NUDCD3-204ENST00000464812 MED1Q15648 1581 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-204ENST00000464812 WASHC2AQ641Q2 1341 aa12.6□□□□□ -0.39
NUDCD3-204ENST00000464812 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
NUDCD3-204ENST00000464812 CCDC7Q96M83 1385 aa12.59□□□□□ -0.39
NUDCD3-204ENST00000464812 C14orf37Q86TY3 774 aa12.59□□□□□ -0.39
NUDCD3-204ENST00000464812 KIF7Q2M1P5 1343 aa12.59□□□□□ -0.39
NUDCD3-204ENST00000464812 ITSN1Q15811 1721 aa12.58□□□□□ -0.4
NUDCD3-204ENST00000464812 POGKQ9P215 609 aa12.58□□□□□ -0.4
NUDCD3-204ENST00000464812 ATF3P18847 181 aa12.57□□□□□ -0.4
NUDCD3-204ENST00000464812 LRP6O75581 1613 aa12.57□□□□□ -0.4
NUDCD3-204ENST00000464812 ATP7BP35670 1465 aa12.57□□□□□ -0.4
NUDCD3-204ENST00000464812 PRR36Q9H6K5 1346 aa12.57□□□□□ -0.4
NUDCD3-204ENST00000464812 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
NUDCD3-204ENST00000464812 PXDNQ92626 1479 aa12.55□□□□□ -0.4
NUDCD3-204ENST00000464812 NUTM2FA1L443 756 aa12.55□□□□□ -0.4
NUDCD3-204ENST00000464812 TMF1P82094 1093 aa12.54□□□□□ -0.4
NUDCD3-204ENST00000464812 SHPRHQ149N8 1683 aa12.54□□□□□ -0.4
NUDCD3-204ENST00000464812 MON2Q7Z3U7 1717 aa12.54□□□□□ -0.4
NUDCD3-204ENST00000464812 PPP4R3CPQ6ZMV5 832 aa12.53□□□□□ -0.4
NUDCD3-204ENST00000464812 RGS17Q9UGC6 210 aaPredicted RBP12.53□□□□□ -0.4
NUDCD3-204ENST00000464812 NRKQ7Z2Y5 1582 aa12.52□□□□□ -0.4
NUDCD3-204ENST00000464812 ILDR2Q71H61 639 aa12.52□□□□□ -0.41
NUDCD3-204ENST00000464812 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
NUDCD3-204ENST00000464812 EVC2Q86UK5 1308 aa12.52□□□□□ -0.41
NUDCD3-204ENST00000464812 WASLO00401 505 aaPredicted RBP12.51□□□□□ -0.41
NUDCD3-204ENST00000464812 CDK19Q9BWU1 502 aa12.51□□□□□ -0.41
NUDCD3-204ENST00000464812 SOS2Q07890 1332 aaPredicted RBP12.51□□□□□ -0.41
NUDCD3-204ENST00000464812 CD163L1Q9NR16 1453 aa12.51□□□□□ -0.41
NUDCD3-204ENST00000464812 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
NUDCD3-204ENST00000464812 TRPM3Q9HCF6 1732 aaPredicted RBP12.49□□□□□ -0.41
NUDCD3-204ENST00000464812 ANKARQ7Z5J8 1434 aa12.49□□□□□ -0.41
NUDCD3-204ENST00000464812 PNPLA6Q8IY17 1366 aa12.49□□□□□ -0.41
NUDCD3-204ENST00000464812 KIF1AQ12756 1690 aa12.48□□□□□ -0.41
NUDCD3-204ENST00000464812 PPIP5K1Q6PFW1 1433 aa12.48□□□□□ -0.41
NUDCD3-204ENST00000464812 JCADQ9P266 1359 aa12.48□□□□□ -0.41
NUDCD3-204ENST00000464812 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
NUDCD3-204ENST00000464812 XPCQ01831 940 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-204ENST00000464812 KIF20BQ96Q89 1820 aa12.48□□□□□ -0.41
NUDCD3-204ENST00000464812 COL22A1Q8NFW1 1626 aaPredicted RBP12.48□□□□□ -0.41
NUDCD3-204ENST00000464812 ATAD2Q6PL18 1390 aa12.47□□□□□ -0.41
NUDCD3-204ENST00000464812 FOXO3O43524 673 aa12.47□□□□□ -0.41
NUDCD3-204ENST00000464812 ESCO1Q5FWF5 840 aa12.47□□□□□ -0.41
NUDCD3-204ENST00000464812 DDX10Q13206 875 aaKnown RBP12.46□□□□□ -0.41
NUDCD3-204ENST00000464812 ANKRD26Q9UPS8 1709 aa12.45□□□□□ -0.42
NUDCD3-204ENST00000464812 NUDT16Q96DE0 195 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-204ENST00000464812 PUS7Q96PZ0 661 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-204ENST00000464812 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
NUDCD3-204ENST00000464812 CRYBG1Q9Y4K1 1723 aa12.45□□□□□ -0.42
NUDCD3-204ENST00000464812 ALS2Q96Q42 1657 aa12.45□□□□□ -0.42
NUDCD3-204ENST00000464812 A0A1W2PP64 1363 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms