RNA–Protein interactions for RNA: ENST00000464552.1

PRKD3-206, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-206ENST00000464552 PCDHGC3Q9UN70 934 aa10.12□□□□□ -0.79
PRKD3-206ENST00000464552 SPTLC1O15269 473 aa10.11□□□□□ -0.79
PRKD3-206ENST00000464552 RSBN1LQ6PCB5 846 aaPredicted RBP10.11□□□□□ -0.79
PRKD3-206ENST00000464552 RSPH6AQ9H0K4 717 aa10.11□□□□□ -0.79
PRKD3-206ENST00000464552 NEUROD2Q15784 382 aa10.09□□□□□ -0.79
PRKD3-206ENST00000464552 MYSM1Q5VVJ2 828 aa10.09□□□□□ -0.79
PRKD3-206ENST00000464552 RIC3Q7Z5B4 369 aa10.09□□□□□ -0.79
PRKD3-206ENST00000464552 RETREG3Q86VR2 466 aa10.09□□□□□ -0.79
PRKD3-206ENST00000464552 FAM117AQ9C073 453 aa10.09□□□□□ -0.79
PRKD3-206ENST00000464552 BRPF1P55201 1214 aaPredicted RBP10.08□□□□□ -0.8
PRKD3-206ENST00000464552 TUSC1Q2TAM9 212 aa10.08□□□□□ -0.8
PRKD3-206ENST00000464552 SPDYE5A6NIY4 337 aa10.07□□□□□ -0.8
PRKD3-206ENST00000464552 C6orf229H3BNL8 230 aa10.07□□□□□ -0.8
PRKD3-206ENST00000464552 PPEF1O14829 653 aaPredicted RBP10.07□□□□□ -0.8
PRKD3-206ENST00000464552 PRKCSHP14314 528 aaPredicted RBP10.07□□□□□ -0.8
PRKD3-206ENST00000464552 MMP16P51512 607 aa10.07□□□□□ -0.8
PRKD3-206ENST00000464552 SYMPKQ92797 1274 aaKnown RBP10.07□□□□□ -0.8
PRKD3-206ENST00000464552 V9GY48 417 aaPredicted RBP10.07□□□□□ -0.8
PRKD3-206ENST00000464552 MTMR2Q13614 643 aa10.06□□□□□ -0.8
PRKD3-206ENST00000464552 PRPF38BQ5VTL8 546 aaKnown RBP10.06□□□□□ -0.8
PRKD3-206ENST00000464552 PRDM9Q9NQV7 894 aa10.06□□□□□ -0.8
PRKD3-206ENST00000464552 DXOO77932 396 aaKnown RBP10.05□□□□□ -0.8
PRKD3-206ENST00000464552 PRKD2Q9BZL6 878 aa10.05□□□□□ -0.8
PRKD3-206ENST00000464552 PCDHB15Q9Y5E8 787 aa10.05□□□□□ -0.8
PRKD3-206ENST00000464552 PLEKHG3A1L390 1219 aa10.04□□□□□ -0.8
PRKD3-206ENST00000464552 LIMD1Q9UGP4 676 aa10.04□□□□□ -0.8
PRKD3-206ENST00000464552 CLK2P49760 499 aaKnown RBP10.03□□□□□ -0.8
PRKD3-206ENST00000464552 SH3D19Q5HYK7 790 aa10.03□□□□□ -0.8
PRKD3-206ENST00000464552 ZBTB3Q9H5J0 574 aa10.03□□□□□ -0.8
PRKD3-206ENST00000464552 FCF1Q9Y324 198 aaKnown RBP10.03□□□□□ -0.8
PRKD3-206ENST00000464552 JUNDP17535 347 aa10.02□□□□□ -0.81
PRKD3-206ENST00000464552 SKIV2LQ15477 1246 aaKnown RBP10.02□□□□□ -0.81
PRKD3-206ENST00000464552 HRCP23327 699 aa10.01□□□□□ -0.81
PRKD3-206ENST00000464552 SLC19A1P41440 591 aa10.01□□□□□ -0.81
PRKD3-206ENST00000464552 PLA2G2CQ5R387 149 aa10.01□□□□□ -0.81
PRKD3-206ENST00000464552 DESI1Q6ICB0 168 aa10.01□□□□□ -0.81
PRKD3-206ENST00000464552 PRR7Q8TB68 274 aa10.01□□□□□ -0.81
PRKD3-206ENST00000464552 EMID1Q96A84 441 aaPredicted RBP10.01□□□□□ -0.81
PRKD3-206ENST00000464552 LILRB3O75022 631 aa10□□□□□ -0.81
PRKD3-206ENST00000464552 POLR3EQ9NVU0 708 aa10□□□□□ -0.81
PRKD3-206ENST00000464552 GOPCQ9HD26 462 aa9.99□□□□□ -0.81
PRKD3-206ENST00000464552 RPIAP49247 311 aa9.98□□□□□ -0.81
PRKD3-206ENST00000464552 CSPP1Q1MSJ5 1256 aa9.98□□□□□ -0.81
PRKD3-206ENST00000464552 LIAT1Q6ZQX7 453 aa9.98□□□□□ -0.81
PRKD3-206ENST00000464552 QPCTQ16769 361 aa9.97□□□□□ -0.81
PRKD3-206ENST00000464552 SPRYD7Q5W111 196 aa9.97□□□□□ -0.81
PRKD3-206ENST00000464552 CABLES1Q8TDN4 633 aa9.97□□□□□ -0.81
PRKD3-206ENST00000464552 NUTM2BA6NNL0 878 aaPredicted RBP9.96□□□□□ -0.82
PRKD3-206ENST00000464552 NUTM2EB1AL46 878 aaPredicted RBP9.96□□□□□ -0.82
PRKD3-206ENST00000464552 CFAP99D6REC4 459 aa9.96□□□□□ -0.82
PRKD3-206ENST00000464552 PTPRNQ16849 979 aa9.96□□□□□ -0.82
PRKD3-206ENST00000464552 NUTM2DQ5VT03 806 aaPredicted RBP9.96□□□□□ -0.82
PRKD3-206ENST00000464552 NUTM2AQ8IVF1 878 aaPredicted RBP9.96□□□□□ -0.82
PRKD3-206ENST00000464552 IL27Q8NEV9 243 aa9.96□□□□□ -0.82
PRKD3-206ENST00000464552 ZBTB24O43167 697 aaPredicted RBP9.95□□□□□ -0.82
PRKD3-206ENST00000464552 ZNF598Q86UK7 904 aaKnown RBP9.95□□□□□ -0.82
PRKD3-206ENST00000464552 NUDT12Q9BQG2 462 aa9.95□□□□□ -0.82
PRKD3-206ENST00000464552 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.95□□□□□ -0.82
PRKD3-206ENST00000464552 CD2BP2O95400 341 aaKnown RBP9.93□□□□□ -0.82
PRKD3-206ENST00000464552 CCNYL3P0C7X3 344 aa9.93□□□□□ -0.82
PRKD3-206ENST00000464552 LYPD8Q6UX82 237 aa9.93□□□□□ -0.82
PRKD3-206ENST00000464552 CCDC24Q8N4L8 307 aa9.93□□□□□ -0.82
PRKD3-206ENST00000464552 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
PRKD3-206ENST00000464552 RTL5Q5HYW3 569 aaPredicted RBP9.92□□□□□ -0.82
PRKD3-206ENST00000464552 PPP2R2DQ66LE6 453 aa9.92□□□□□ -0.82
PRKD3-206ENST00000464552 IRX2Q9BZI1 471 aaPredicted RBP9.92□□□□□ -0.82
PRKD3-206ENST00000464552 EVA1BQ9NVM1 165 aa9.91□□□□□ -0.82
PRKD3-206ENST00000464552 ZNF697Q5TEC3 545 aa9.9□□□□□ -0.82
PRKD3-206ENST00000464552 HELBQ8NG08 1087 aaPredicted RBP9.9□□□□□ -0.82
PRKD3-206ENST00000464552 PCMTD1Q96MG8 357 aaPredicted RBP9.9□□□□□ -0.82
PRKD3-206ENST00000464552 ATP1B4Q9UN42 357 aaPredicted RBP9.9□□□□□ -0.82
PRKD3-206ENST00000464552 TRIM32Q13049 653 aa9.89□□□□□ -0.83
PRKD3-206ENST00000464552 KCNH2Q12809 1159 aa9.88□□□□□ -0.83
PRKD3-206ENST00000464552 LAPTM4AQ15012 233 aa9.88□□□□□ -0.83
PRKD3-206ENST00000464552 PTCRAQ6ISU1 281 aaPredicted RBP9.87□□□□□ -0.83
PRKD3-206ENST00000464552 TSC1Q92574 1164 aa9.87□□□□□ -0.83
PRKD3-206ENST00000464552 PRR20EP86478 221 aa9.86□□□□□ -0.83
PRKD3-206ENST00000464552 PRR20CP86479 221 aa9.86□□□□□ -0.83
PRKD3-206ENST00000464552 PRR20DP86480 221 aa9.86□□□□□ -0.83
PRKD3-206ENST00000464552 PRR20BP86481 221 aa9.86□□□□□ -0.83
PRKD3-206ENST00000464552 PRR20AP86496 221 aa9.86□□□□□ -0.83
PRKD3-206ENST00000464552 FBXO31Q5XUX0 539 aaPredicted RBP9.86□□□□□ -0.83
PRKD3-206ENST00000464552 TRIM67Q6ZTA4 783 aa9.86□□□□□ -0.83
PRKD3-206ENST00000464552 PER1O15534 1290 aaPredicted RBP9.85□□□□□ -0.83
PRKD3-206ENST00000464552 GDF9O60383 454 aa9.85□□□□□ -0.83
PRKD3-206ENST00000464552 GFRA3O60609 400 aa9.85□□□□□ -0.83
PRKD3-206ENST00000464552 F12P00748 615 aaPredicted RBP9.85□□□□□ -0.83
PRKD3-206ENST00000464552 PDZRN3Q9UPQ7 1066 aa9.85□□□□□ -0.83
PRKD3-206ENST00000464552 WNT7BP56706 349 aa9.84□□□□□ -0.83
PRKD3-206ENST00000464552 UNC93B1Q9H1C4 597 aa9.84□□□□□ -0.83
PRKD3-206ENST00000464552 NRG2O14511 850 aaPredicted RBP9.83□□□□□ -0.84
PRKD3-206ENST00000464552 PKD2L1Q9P0L9 805 aa9.83□□□□□ -0.84
PRKD3-206ENST00000464552 CTHP32929 405 aa9.82□□□□□ -0.84
PRKD3-206ENST00000464552 RFC5P40937 340 aa9.82□□□□□ -0.84
PRKD3-206ENST00000464552 CTDSPL2Q05D32 466 aa9.82□□□□□ -0.84
PRKD3-206ENST00000464552 WNT7AO00755 349 aa9.81□□□□□ -0.84
PRKD3-206ENST00000464552 MAP10Q9P2G4 905 aa9.81□□□□□ -0.84
PRKD3-206ENST00000464552 SKOR1P84550 965 aa9.8□□□□□ -0.84
PRKD3-206ENST00000464552 TNFRSF10AO00220 468 aa9.79□□□□□ -0.84
PRKD3-206ENST00000464552 AP1G2O75843 785 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms