RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 GUCA2AQ02747 115 aa7.24□□□□□ -1.25
HMGXB4-205ENST00000464480 FBXO31Q5XUX0 539 aaPredicted RBP7.24□□□□□ -1.25
HMGXB4-205ENST00000464480 CABLES1Q8TDN4 633 aa7.24□□□□□ -1.25
HMGXB4-205ENST00000464480 SUPT5HO00267 1087 aaKnown RBP7.23□□□□□ -1.25
HMGXB4-205ENST00000464480 RAD21O60216 631 aa7.23□□□□□ -1.25
HMGXB4-205ENST00000464480 AP1G2O75843 785 aa7.23□□□□□ -1.25
HMGXB4-205ENST00000464480 HRCP23327 699 aa7.23□□□□□ -1.25
HMGXB4-205ENST00000464480 PPP4CP60510 307 aa7.23□□□□□ -1.25
HMGXB4-205ENST00000464480 NYAP1Q6ZVC0 841 aa7.23□□□□□ -1.25
HMGXB4-205ENST00000464480 HLA-CQ95604 372 aa7.23□□□□□ -1.25
HMGXB4-205ENST00000464480 HPS5Q9UPZ3 1129 aa7.23□□□□□ -1.25
HMGXB4-205ENST00000464480 A6NJR5 290 aa7.22□□□□□ -1.25
HMGXB4-205ENST00000464480 C6orf229H3BNL8 230 aa7.22□□□□□ -1.25
HMGXB4-205ENST00000464480 BCAMP50895 628 aa7.22□□□□□ -1.25
HMGXB4-205ENST00000464480 RTL5Q5HYW3 569 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-205ENST00000464480 HELBQ8NG08 1087 aaPredicted RBP7.22□□□□□ -1.25
HMGXB4-205ENST00000464480 TSR3Q9UJK0 312 aaKnown RBP7.22□□□□□ -1.25
HMGXB4-205ENST00000464480 PCDHGC3Q9UN70 934 aa7.22□□□□□ -1.25
HMGXB4-205ENST00000464480 SOCS7O14512 581 aa7.21□□□□□ -1.26
HMGXB4-205ENST00000464480 Q3C1V9 767 aa7.21□□□□□ -1.26
HMGXB4-205ENST00000464480 CLUAP1Q96AJ1 413 aa7.21□□□□□ -1.26
HMGXB4-205ENST00000464480 USP17L8P0C7I0 530 aa7.2□□□□□ -1.26
HMGXB4-205ENST00000464480 MORN1Q5T089 497 aa7.2□□□□□ -1.26
HMGXB4-205ENST00000464480 PRM3Q9NNZ6 103 aa7.2□□□□□ -1.26
HMGXB4-205ENST00000464480 SNRKQ9NRH2 765 aa7.2□□□□□ -1.26
HMGXB4-205ENST00000464480 MTMR14Q8NCE2 650 aa7.19□□□□□ -1.26
HMGXB4-205ENST00000464480 PUS10Q3MIT2 529 aaKnown RBP7.18□□□□□ -1.26
HMGXB4-205ENST00000464480 RETREG3Q86VR2 466 aa7.18□□□□□ -1.26
HMGXB4-205ENST00000464480 PROSER2Q86WR7 435 aaPredicted RBP7.18□□□□□ -1.26
HMGXB4-205ENST00000464480 TSC1Q92574 1164 aa7.18□□□□□ -1.26
HMGXB4-205ENST00000464480 PCDHB3Q9Y5E6 796 aa7.18□□□□□ -1.26
HMGXB4-205ENST00000464480 SLC27A5Q9Y2P5 690 aa7.17□□□□□ -1.26
HMGXB4-205ENST00000464480 COG6Q9Y2V7 657 aa7.17□□□□□ -1.26
HMGXB4-205ENST00000464480 CFAP99D6REC4 459 aa7.16□□□□□ -1.26
HMGXB4-205ENST00000464480 NR1I2O75469 434 aa7.16□□□□□ -1.26
HMGXB4-205ENST00000464480 APLP1P51693 650 aa7.16□□□□□ -1.26
HMGXB4-205ENST00000464480 WWC1Q8IX03 1113 aa7.16□□□□□ -1.26
HMGXB4-205ENST00000464480 POM121Q96HA1 1249 aa7.16□□□□□ -1.26
HMGXB4-205ENST00000464480 PLA2G2EQ9NZK7 142 aa7.16□□□□□ -1.26
HMGXB4-205ENST00000464480 TRAK2O60296 914 aa7.15□□□□□ -1.26
HMGXB4-205ENST00000464480 PRR7Q8TB68 274 aa7.15□□□□□ -1.26
HMGXB4-205ENST00000464480 SYMPKQ92797 1274 aaKnown RBP7.15□□□□□ -1.26
HMGXB4-205ENST00000464480 WBP1LQ9NX94 342 aa7.15□□□□□ -1.26
HMGXB4-205ENST00000464480 SALL2Q9Y467 1007 aaPredicted RBP7.15□□□□□ -1.26
HMGXB4-205ENST00000464480 CTDSPL2Q05D32 466 aa7.14□□□□□ -1.27
HMGXB4-205ENST00000464480 NDUFB9Q9Y6M9 179 aa7.14□□□□□ -1.27
HMGXB4-205ENST00000464480 FMNL1O95466 1100 aaPredicted RBP7.13□□□□□ -1.27
HMGXB4-205ENST00000464480 DESI1Q6ICB0 168 aa7.13□□□□□ -1.27
HMGXB4-205ENST00000464480 RNF19BQ6ZMZ0 732 aa7.13□□□□□ -1.27
HMGXB4-205ENST00000464480 GDPD2Q9HCC8 539 aa7.13□□□□□ -1.27
HMGXB4-205ENST00000464480 ABL2P42684 1182 aa7.12□□□□□ -1.27
HMGXB4-205ENST00000464480 BLOC1S3Q6QNY0 202 aa7.12□□□□□ -1.27
HMGXB4-205ENST00000464480 SCUBE3Q8IX30 993 aa7.12□□□□□ -1.27
HMGXB4-205ENST00000464480 USB1Q9BQ65 265 aaKnown RBP7.12□□□□□ -1.27
HMGXB4-205ENST00000464480 BRICD5Q6PL45 260 aa7.11□□□□□ -1.27
HMGXB4-205ENST00000464480 FNBP4Q8N3X1 1017 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-205ENST00000464480 LRRN4Q8WUT4 740 aa7.11□□□□□ -1.27
HMGXB4-205ENST00000464480 GJD4Q96KN9 370 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-205ENST00000464480 ARXQ96QS3 562 aa7.11□□□□□ -1.27
HMGXB4-205ENST00000464480 HMX1Q9NP08 348 aaPredicted RBP7.11□□□□□ -1.27
HMGXB4-205ENST00000464480 TBC1D2BQ9UPU7 963 aa7.11□□□□□ -1.27
HMGXB4-205ENST00000464480 ARID3CA6NKF2 412 aa7.1□□□□□ -1.27
HMGXB4-205ENST00000464480 IFFO2Q5TF58 517 aa7.1□□□□□ -1.27
HMGXB4-205ENST00000464480 ZNF330Q9Y3S2 320 aaPredicted RBP7.1□□□□□ -1.27
HMGXB4-205ENST00000464480 COPS2P61201 443 aa7.09□□□□□ -1.27
HMGXB4-205ENST00000464480 PNMA1Q8ND90 353 aa7.09□□□□□ -1.27
HMGXB4-205ENST00000464480 THAP11Q96EK4 314 aa7.09□□□□□ -1.27
HMGXB4-205ENST00000464480 JUNDP17535 347 aa7.08□□□□□ -1.28
HMGXB4-205ENST00000464480 KCNC4Q03721 635 aa7.08□□□□□ -1.28
HMGXB4-205ENST00000464480 MSS51Q4VC12 460 aa7.08□□□□□ -1.28
HMGXB4-205ENST00000464480 LYPD8Q6UX82 237 aa7.08□□□□□ -1.28
HMGXB4-205ENST00000464480 SPSB2Q99619 263 aa7.08□□□□□ -1.28
HMGXB4-205ENST00000464480 TRIM34Q9BYJ4 488 aa7.08□□□□□ -1.28
HMGXB4-205ENST00000464480 C1orf115Q9H7X2 142 aa7.08□□□□□ -1.28
HMGXB4-205ENST00000464480 PER1O15534 1290 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-205ENST00000464480 ITGBL1O95965 494 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-205ENST00000464480 PTPRNQ16849 979 aa7.07□□□□□ -1.28
HMGXB4-205ENST00000464480 ZNF777Q9ULD5 760 aaPredicted RBP7.07□□□□□ -1.28
HMGXB4-205ENST00000464480 NR6A1Q15406 480 aa7.06□□□□□ -1.28
HMGXB4-205ENST00000464480 WASHC4Q2M389 1173 aa7.06□□□□□ -1.28
HMGXB4-205ENST00000464480 HOMEZQ8IX15 550 aa7.06□□□□□ -1.28
HMGXB4-205ENST00000464480 MTRQ99707 1265 aa7.06□□□□□ -1.28
HMGXB4-205ENST00000464480 ARID3AQ99856 593 aa7.06□□□□□ -1.28
HMGXB4-205ENST00000464480 ZPR1O75312 459 aa7.05□□□□□ -1.28
HMGXB4-205ENST00000464480 ADH1BP00325 375 aa7.05□□□□□ -1.28
HMGXB4-205ENST00000464480 CCDC82Q8N4S0 544 aa7.05□□□□□ -1.28
HMGXB4-205ENST00000464480 CCDC97Q96F63 343 aaPredicted RBP7.05□□□□□ -1.28
HMGXB4-205ENST00000464480 IL21Q9HBE4 155 aa7.05□□□□□ -1.28
HMGXB4-205ENST00000464480 TLL1O43897 1013 aa7.04□□□□□ -1.28
HMGXB4-205ENST00000464480 EPS8L1Q8TE68 723 aa7.04□□□□□ -1.28
HMGXB4-205ENST00000464480 DXOO77932 396 aaKnown RBP7.03□□□□□ -1.28
HMGXB4-205ENST00000464480 F12P00748 615 aaPredicted RBP7.03□□□□□ -1.28
HMGXB4-205ENST00000464480 IRF5Q13568 498 aa7.03□□□□□ -1.28
HMGXB4-205ENST00000464480 NUDT12Q9BQG2 462 aa7.03□□□□□ -1.28
HMGXB4-205ENST00000464480 SERPINA10Q9UK55 444 aa7.03□□□□□ -1.28
HMGXB4-205ENST00000464480 GPR37L1O60883 481 aa7.02□□□□□ -1.29
HMGXB4-205ENST00000464480 CCNYL3P0C7X3 344 aa7.02□□□□□ -1.29
HMGXB4-205ENST00000464480 CTHP32929 405 aa7.02□□□□□ -1.29
HMGXB4-205ENST00000464480 MMP16P51512 607 aa7.02□□□□□ -1.29
HMGXB4-205ENST00000464480 FAM160A2Q8N612 972 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms