RNA–Protein interactions for RNA: ENST00000464435.1

USP25-207, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 845 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-207ENST00000464435 GJA5P36382 358 aa10.17□□□□□ -0.78
USP25-207ENST00000464435 SLC19A1P41440 591 aa10.17□□□□□ -0.78
USP25-207ENST00000464435 SPIRE2Q8WWL2 714 aa10.17□□□□□ -0.78
USP25-207ENST00000464435 FAM160A2Q8N612 972 aaPredicted RBP10.15□□□□□ -0.78
USP25-207ENST00000464435 MS4A1P11836 297 aa10.14□□□□□ -0.79
USP25-207ENST00000464435 RNF19BQ6ZMZ0 732 aa10.14□□□□□ -0.79
USP25-207ENST00000464435 USB1Q9BQ65 265 aaKnown RBP10.14□□□□□ -0.79
USP25-207ENST00000464435 FDX1P10109 184 aa10.13□□□□□ -0.79
USP25-207ENST00000464435 MYT1Q01538 1121 aa10.13□□□□□ -0.79
USP25-207ENST00000464435 PKDCCQ504Y2 493 aa10.13□□□□□ -0.79
USP25-207ENST00000464435 SPRYD7Q5W111 196 aa10.13□□□□□ -0.79
USP25-207ENST00000464435 POTECB2RU33 542 aa10.11□□□□□ -0.79
USP25-207ENST00000464435 PPEF1O14829 653 aaPredicted RBP10.11□□□□□ -0.79
USP25-207ENST00000464435 MMP16P51512 607 aa10.11□□□□□ -0.79
USP25-207ENST00000464435 ZNF598Q86UK7 904 aaKnown RBP10.11□□□□□ -0.79
USP25-207ENST00000464435 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
USP25-207ENST00000464435 SPDYE5A6NIY4 337 aa10.1□□□□□ -0.79
USP25-207ENST00000464435 DGAT1O75907 488 aa10.1□□□□□ -0.79
USP25-207ENST00000464435 RETREG3Q86VR2 466 aa10.1□□□□□ -0.79
USP25-207ENST00000464435 HLA-CQ95604 372 aa10.1□□□□□ -0.79
USP25-207ENST00000464435 MOXD2PA6NHM9 499 aa10.09□□□□□ -0.79
USP25-207ENST00000464435 PRR20EP86478 221 aa10.09□□□□□ -0.79
USP25-207ENST00000464435 PRR20CP86479 221 aa10.09□□□□□ -0.79
USP25-207ENST00000464435 PRR20DP86480 221 aa10.09□□□□□ -0.79
USP25-207ENST00000464435 PRR20BP86481 221 aa10.09□□□□□ -0.79
USP25-207ENST00000464435 PRR20AP86496 221 aa10.09□□□□□ -0.79
USP25-207ENST00000464435 SPTLC1O15269 473 aa10.08□□□□□ -0.8
USP25-207ENST00000464435 DXOO77932 396 aaKnown RBP10.08□□□□□ -0.8
USP25-207ENST00000464435 RPIAP49247 311 aa10.08□□□□□ -0.8
USP25-207ENST00000464435 LIAT1Q6ZQX7 453 aa10.08□□□□□ -0.8
USP25-207ENST00000464435 RSPH6AQ9H0K4 717 aa10.08□□□□□ -0.8
USP25-207ENST00000464435 GUCA2AQ02747 115 aa10.07□□□□□ -0.8
USP25-207ENST00000464435 TUSC1Q2TAM9 212 aa10.07□□□□□ -0.8
USP25-207ENST00000464435 RSBN1LQ6PCB5 846 aaPredicted RBP10.07□□□□□ -0.8
USP25-207ENST00000464435 PCDHGC3Q9UN70 934 aa10.07□□□□□ -0.8
USP25-207ENST00000464435 BRPF1P55201 1214 aaPredicted RBP10.06□□□□□ -0.8
USP25-207ENST00000464435 ZNF697Q5TEC3 545 aa10.06□□□□□ -0.8
USP25-207ENST00000464435 FCF1Q9Y324 198 aaKnown RBP10.06□□□□□ -0.8
USP25-207ENST00000464435 C6orf229H3BNL8 230 aa10.05□□□□□ -0.8
USP25-207ENST00000464435 TNFRSF10AO00220 468 aa10.05□□□□□ -0.8
USP25-207ENST00000464435 NDUFV2P19404 249 aa10.05□□□□□ -0.8
USP25-207ENST00000464435 PRPF38BQ5VTL8 546 aaKnown RBP10.05□□□□□ -0.8
USP25-207ENST00000464435 FAM187AA6NFU0 413 aa10.04□□□□□ -0.8
USP25-207ENST00000464435 GDF9O60383 454 aa10.04□□□□□ -0.8
USP25-207ENST00000464435 JUNDP17535 347 aa10.04□□□□□ -0.8
USP25-207ENST00000464435 MTMR2Q13614 643 aa10.04□□□□□ -0.8
USP25-207ENST00000464435 RIC3Q7Z5B4 369 aa10.04□□□□□ -0.8
USP25-207ENST00000464435 DDRGK1Q96HY6 314 aa10.04□□□□□ -0.8
USP25-207ENST00000464435 PRDM9Q9NQV7 894 aa10.04□□□□□ -0.8
USP25-207ENST00000464435 CD2BP2O95400 341 aaKnown RBP10.03□□□□□ -0.8
USP25-207ENST00000464435 DESI1Q6ICB0 168 aa10.03□□□□□ -0.8
USP25-207ENST00000464435 KDM4CQ9H3R0 1056 aa10.03□□□□□ -0.8
USP25-207ENST00000464435 ZBTB24O43167 697 aaPredicted RBP10.02□□□□□ -0.81
USP25-207ENST00000464435 PLA2G2CQ5R387 149 aa10.02□□□□□ -0.81
USP25-207ENST00000464435 MYSM1Q5VVJ2 828 aa10.02□□□□□ -0.81
USP25-207ENST00000464435 SYMPKQ92797 1274 aaKnown RBP10.02□□□□□ -0.81
USP25-207ENST00000464435 ZBTB3Q9H5J0 574 aa10.01□□□□□ -0.81
USP25-207ENST00000464435 ST8SIA5O15466 376 aa10□□□□□ -0.81
USP25-207ENST00000464435 NEUROD2Q15784 382 aa9.99□□□□□ -0.81
USP25-207ENST00000464435 PRR7Q8TB68 274 aa9.98□□□□□ -0.81
USP25-207ENST00000464435 AAASQ9NRG9 546 aa9.98□□□□□ -0.81
USP25-207ENST00000464435 CLK2P49760 499 aaKnown RBP9.97□□□□□ -0.81
USP25-207ENST00000464435 PTPRNQ16849 979 aa9.97□□□□□ -0.81
USP25-207ENST00000464435 TMEM132AQ24JP5 1023 aa9.97□□□□□ -0.81
USP25-207ENST00000464435 GPBP1L1Q9HC44 474 aaPredicted RBP9.97□□□□□ -0.81
USP25-207ENST00000464435 PCDHB15Q9Y5E8 787 aa9.97□□□□□ -0.81
USP25-207ENST00000464435 HRCP23327 699 aa9.96□□□□□ -0.82
USP25-207ENST00000464435 LCE2AQ5TA79 106 aaPredicted RBP9.96□□□□□ -0.82
USP25-207ENST00000464435 NUDT12Q9BQG2 462 aa9.96□□□□□ -0.82
USP25-207ENST00000464435 LILRB3O75022 631 aa9.95□□□□□ -0.82
USP25-207ENST00000464435 SKIV2LQ15477 1246 aaKnown RBP9.95□□□□□ -0.82
USP25-207ENST00000464435 SH3D19Q5HYK7 790 aa9.95□□□□□ -0.82
USP25-207ENST00000464435 TREML4Q6UXN2 200 aa9.95□□□□□ -0.82
USP25-207ENST00000464435 LIMD1Q9UGP4 676 aa9.95□□□□□ -0.82
USP25-207ENST00000464435 CCNYL3P0C7X3 344 aa9.94□□□□□ -0.82
USP25-207ENST00000464435 CCDC24Q8N4L8 307 aa9.94□□□□□ -0.82
USP25-207ENST00000464435 FAM117AQ9C073 453 aa9.94□□□□□ -0.82
USP25-207ENST00000464435 PKD2L1Q9P0L9 805 aa9.94□□□□□ -0.82
USP25-207ENST00000464435 TRIM32Q13049 653 aa9.93□□□□□ -0.82
USP25-207ENST00000464435 EVA1BQ9NVM1 165 aa9.93□□□□□ -0.82
USP25-207ENST00000464435 NUTM2BA6NNL0 878 aaPredicted RBP9.92□□□□□ -0.82
USP25-207ENST00000464435 NUTM2EB1AL46 878 aaPredicted RBP9.92□□□□□ -0.82
USP25-207ENST00000464435 FOXC1Q12948 553 aa9.92□□□□□ -0.82
USP25-207ENST00000464435 NUTM2DQ5VT03 806 aaPredicted RBP9.92□□□□□ -0.82
USP25-207ENST00000464435 LYPD8Q6UX82 237 aa9.92□□□□□ -0.82
USP25-207ENST00000464435 NUTM2AQ8IVF1 878 aaPredicted RBP9.92□□□□□ -0.82
USP25-207ENST00000464435 GOPCQ9HD26 462 aa9.92□□□□□ -0.82
USP25-207ENST00000464435 WNT7BP56706 349 aa9.91□□□□□ -0.82
USP25-207ENST00000464435 PLEKHG3A1L390 1219 aa9.9□□□□□ -0.82
USP25-207ENST00000464435 CFAP99D6REC4 459 aa9.9□□□□□ -0.82
USP25-207ENST00000464435 KCNH2Q12809 1159 aa9.9□□□□□ -0.82
USP25-207ENST00000464435 CSPP1Q1MSJ5 1256 aa9.9□□□□□ -0.82
USP25-207ENST00000464435 CABLES1Q8TDN4 633 aa9.9□□□□□ -0.82
USP25-207ENST00000464435 POLR3EQ9NVU0 708 aa9.9□□□□□ -0.82
USP25-207ENST00000464435 DACH1Q9UI36 760 aa9.9□□□□□ -0.82
USP25-207ENST00000464435 WNT7AO00755 349 aa9.89□□□□□ -0.83
USP25-207ENST00000464435 QPCTQ16769 361 aa9.89□□□□□ -0.83
USP25-207ENST00000464435 GTF3C3Q9Y5Q9 886 aa9.89□□□□□ -0.83
USP25-207ENST00000464435 HELBQ8NG08 1087 aaPredicted RBP9.88□□□□□ -0.83
USP25-207ENST00000464435 PPP2R2DQ66LE6 453 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms