RNA–Protein interactions for RNA: ENST00000463717.5

GCOM1-204, Transcript of GRINL1A complex locus 1, humanhuman

TSL 2

Gene GCOM1, Length 1,694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCOM1-204ENST00000463717 BCANQ96GW7 911 aa27.1■■□□□ 1.93
GCOM1-204ENST00000463717 WDR43Q15061 677 aaKnown RBP eCLIP27.08■■□□□ 1.93
GCOM1-204ENST00000463717 NLRP1Q9C000 1473 aa27.08■■□□□ 1.93
GCOM1-204ENST00000463717 C3P01024 1663 aa27.05■■□□□ 1.92
GCOM1-204ENST00000463717 RNF123Q5XPI4 1314 aa27.05■■□□□ 1.92
GCOM1-204ENST00000463717 HDGFP51858 240 aaKnown RBP27.05■■□□□ 1.92
GCOM1-204ENST00000463717 CGNL1Q0VF96 1302 aa27.04■■□□□ 1.92
GCOM1-204ENST00000463717 POLR3AO14802 1390 aaPredicted RBP27.03■■□□□ 1.92
GCOM1-204ENST00000463717 SLC12A5Q9H2X9 1139 aa27.02■■□□□ 1.92
GCOM1-204ENST00000463717 STK26Q9P289 416 aa27.02■■□□□ 1.92
GCOM1-204ENST00000463717 CPS1P31327 1500 aa27.02■■□□□ 1.92
GCOM1-204ENST00000463717 POGKQ9P215 609 aa27.01■■□□□ 1.92
GCOM1-204ENST00000463717 SHPRHQ149N8 1683 aa27.01■■□□□ 1.91
GCOM1-204ENST00000463717 ABCC11Q96J66 1382 aa27.01■■□□□ 1.91
GCOM1-204ENST00000463717 PRAM1Q96QH2 718 aa27.01■■□□□ 1.91
GCOM1-204ENST00000463717 KIF20BQ96Q89 1820 aa27■■□□□ 1.91
GCOM1-204ENST00000463717 TECPR2O15040 1411 aa26.98■■□□□ 1.91
GCOM1-204ENST00000463717 MED14O60244 1454 aa26.98■■□□□ 1.91
GCOM1-204ENST00000463717 TMEM2Q9UHN6 1383 aa26.98■■□□□ 1.91
GCOM1-204ENST00000463717 ADAMTS8Q9UP79 889 aa26.98■■□□□ 1.91
GCOM1-204ENST00000463717 PPP4R2Q9NY27 417 aa26.97■■□□□ 1.91
GCOM1-204ENST00000463717 MORC1Q86VD1 984 aa26.96■■□□□ 1.91
GCOM1-204ENST00000463717 CABP2Q9NPB3 220 aa26.95■■□□□ 1.91
GCOM1-204ENST00000463717 FAM135BQ49AJ0 1406 aa26.95■■□□□ 1.9
GCOM1-204ENST00000463717 SRPK2P78362 688 aaKnown RBP26.95■■□□□ 1.9
GCOM1-204ENST00000463717 A0A1W2PP64 1363 aa26.94■■□□□ 1.9
GCOM1-204ENST00000463717 ATP7BP35670 1465 aa26.94■■□□□ 1.9
GCOM1-204ENST00000463717 MINK1Q8N4C8 1332 aaPredicted RBP26.93■■□□□ 1.9
GCOM1-204ENST00000463717 IRX6P78412 446 aaPredicted RBP26.93■■□□□ 1.9
GCOM1-204ENST00000463717 SAFB2Q14151 953 aaKnown RBP eCLIP26.93■■□□□ 1.9
GCOM1-204ENST00000463717 NGEFQ8N5V2 710 aa26.92■■□□□ 1.9
GCOM1-204ENST00000463717 TERF2IPQ9NYB0 399 aa26.92■■□□□ 1.9
GCOM1-204ENST00000463717 CD163L1Q9NR16 1453 aa26.91■■□□□ 1.9
GCOM1-204ENST00000463717 SLIT1O75093 1534 aa26.9■■□□□ 1.9
GCOM1-204ENST00000463717 SIRT1Q96EB6 747 aa26.9■■□□□ 1.9
GCOM1-204ENST00000463717 PLEKHG1Q9ULL1 1385 aa26.89■■□□□ 1.89
GCOM1-204ENST00000463717 ADGRB2O60241 1585 aa26.89■■□□□ 1.89
GCOM1-204ENST00000463717 DIP2AQ14689 1571 aa26.87■■□□□ 1.89
GCOM1-204ENST00000463717 ARHGAP23Q9P227 1491 aa26.87■■□□□ 1.89
GCOM1-204ENST00000463717 METP08581 1390 aa26.86■■□□□ 1.89
GCOM1-204ENST00000463717 HDGFL2Q7Z4V5 671 aaPredicted RBP26.85■■□□□ 1.89
GCOM1-204ENST00000463717 SENP3-EIF4A1A0A087X0R7 540 aa26.84■■□□□ 1.89
GCOM1-204ENST00000463717 CFAP53Q96M91 514 aa26.84■■□□□ 1.89
GCOM1-204ENST00000463717 CDK19Q9BWU1 502 aa26.84■■□□□ 1.89
GCOM1-204ENST00000463717 RCAN3Q9UKA8 241 aa26.84■■□□□ 1.89
GCOM1-204ENST00000463717 ZNF521Q96K83 1311 aa26.84■■□□□ 1.89
GCOM1-204ENST00000463717 ITSN1Q15811 1721 aa26.84■■□□□ 1.89
GCOM1-204ENST00000463717 PLEKHH1Q9ULM0 1364 aa26.84■■□□□ 1.89
GCOM1-204ENST00000463717 ADAMTS13Q76LX8 1427 aa26.83■■□□□ 1.89
GCOM1-204ENST00000463717 SENP3Q9H4L4 574 aaPredicted RBP26.83■■□□□ 1.89
GCOM1-204ENST00000463717 SALL2Q9Y467 1007 aaPredicted RBP26.83■■□□□ 1.89
GCOM1-204ENST00000463717 MON2Q7Z3U7 1717 aa26.83■■□□□ 1.88
GCOM1-204ENST00000463717 AKAP12Q02952 1782 aa26.81■■□□□ 1.88
GCOM1-204ENST00000463717 RRP1P56182 461 aaKnown RBP26.8■■□□□ 1.88
GCOM1-204ENST00000463717 CDC42BPGQ6DT37 1551 aa26.8■■□□□ 1.88
GCOM1-204ENST00000463717 IQSEC2Q5JU85 1478 aa26.79■■□□□ 1.88
GCOM1-204ENST00000463717 TRHP20396 242 aaPredicted RBP26.77■■□□□ 1.88
GCOM1-204ENST00000463717 TOPAZ1Q8N9V7 1692 aa26.77■■□□□ 1.88
GCOM1-204ENST00000463717 CDCA7LQ96GN5 454 aa26.76■■□□□ 1.87
GCOM1-204ENST00000463717 GOLGA2Q08379 1002 aa26.76■■□□□ 1.87
GCOM1-204ENST00000463717 WAPLQ7Z5K2 1190 aa26.75■■□□□ 1.87
GCOM1-204ENST00000463717 WASLO00401 505 aaPredicted RBP26.74■■□□□ 1.87
GCOM1-204ENST00000463717 TSHZ2Q9NRE2 1034 aa26.74■■□□□ 1.87
GCOM1-204ENST00000463717 EID1Q9Y6B2 187 aa26.74■■□□□ 1.87
GCOM1-204ENST00000463717 ZNF142P52746 1687 aaPredicted RBP26.73■■□□□ 1.87
GCOM1-204ENST00000463717 RIMS1Q86UR5 1692 aaKnown RBP26.73■■□□□ 1.87
GCOM1-204ENST00000463717 COL3A1P02461 1466 aaPredicted RBP26.73■■□□□ 1.87
GCOM1-204ENST00000463717 MTHFSP49914 203 aa26.73■■□□□ 1.87
GCOM1-204ENST00000463717 EDC4Q6P2E9 1401 aaKnown RBP26.73■■□□□ 1.87
GCOM1-204ENST00000463717 CEP170BQ9Y4F5 1589 aaPredicted RBP26.72■■□□□ 1.87
GCOM1-204ENST00000463717 CPSF1Q10570 1443 aaKnown RBP26.72■■□□□ 1.87
GCOM1-204ENST00000463717 PPIP5K1Q6PFW1 1433 aa26.72■■□□□ 1.87
GCOM1-204ENST00000463717 TNNT2P45379 298 aaPredicted RBP26.71■■□□□ 1.87
GCOM1-204ENST00000463717 CCDC146Q8IYE0 955 aa26.71■■□□□ 1.87
GCOM1-204ENST00000463717 NCBP3Q53F19 620 aaKnown RBP26.7■■□□□ 1.87
GCOM1-204ENST00000463717 CABP1Q9NZU7 370 aa26.7■■□□□ 1.87
GCOM1-204ENST00000463717 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.7■■□□□ 1.87
GCOM1-204ENST00000463717 PTCH1Q13635 1447 aa26.7■■□□□ 1.86
GCOM1-204ENST00000463717 APAF1O14727 1248 aa26.7■■□□□ 1.86
GCOM1-204ENST00000463717 DUSP27Q5VZP5 1158 aa26.69■■□□□ 1.86
GCOM1-204ENST00000463717 RUNDC1Q96C34 613 aa26.69■■□□□ 1.86
GCOM1-204ENST00000463717 FYB1O15117 783 aa26.68■■□□□ 1.86
GCOM1-204ENST00000463717 XRN1Q8IZH2 1706 aaKnown RBP26.68■■□□□ 1.86
GCOM1-204ENST00000463717 CEBPAP49715 358 aaPredicted RBP26.67■■□□□ 1.86
GCOM1-204ENST00000463717 TXNDC2Q86VQ3 553 aa26.67■■□□□ 1.86
GCOM1-204ENST00000463717 NKTRP30414 1462 aaKnown RBP26.67■■□□□ 1.86
GCOM1-204ENST00000463717 ROBO2Q9HCK4 1378 aa26.67■■□□□ 1.86
GCOM1-204ENST00000463717 LTKP29376 864 aa26.66■■□□□ 1.86
GCOM1-204ENST00000463717 SLFN5Q08AF3 891 aa26.66■■□□□ 1.86
GCOM1-204ENST00000463717 NRKQ7Z2Y5 1582 aa26.66■■□□□ 1.86
GCOM1-204ENST00000463717 E9PSI1 815 aa26.66■■□□□ 1.86
GCOM1-204ENST00000463717 THEMISQ8N1K5 641 aaPredicted RBP26.66■■□□□ 1.86
GCOM1-204ENST00000463717 GGNBP2Q9H3C7 697 aa26.66■■□□□ 1.86
GCOM1-204ENST00000463717 ADAMTSL3P82987 1691 aa26.65■■□□□ 1.86
GCOM1-204ENST00000463717 TRMT2AQ8IZ69 625 aaKnown RBP26.65■■□□□ 1.86
GCOM1-204ENST00000463717 B4GALNT3Q6L9W6 998 aa26.63■■□□□ 1.85
GCOM1-204ENST00000463717 MAP2P11137 1827 aaKnown RBP26.63■■□□□ 1.85
GCOM1-204ENST00000463717 TBX22Q9Y458 520 aa26.61■■□□□ 1.85
GCOM1-204ENST00000463717 NUDT16Q96DE0 195 aaKnown RBP26.6■■□□□ 1.85
GCOM1-204ENST00000463717 CCDC136Q96JN2 1154 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms