RNA–Protein interactions for RNA: ENST00000463705.5

CHRNA4-202, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 1 (best)

Gene CHRNA4, Length 5,201 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-202ENST00000463705 PEG3Q9GZU2 1588 aa16.46■□□□□ 0.23
CHRNA4-202ENST00000463705 MAGI1Q96QZ7 1491 aaPredicted RBP16.46■□□□□ 0.23
CHRNA4-202ENST00000463705 RNF20Q5VTR2 975 aa16.46■□□□□ 0.22
CHRNA4-202ENST00000463705 CPLX2Q6PUV4 134 aaKnown RBP16.45■□□□□ 0.22
CHRNA4-202ENST00000463705 ERC2O15083 957 aa16.45■□□□□ 0.22
CHRNA4-202ENST00000463705 PANK1Q8TE04 598 aa16.45■□□□□ 0.22
CHRNA4-202ENST00000463705 AMOTL1Q8IY63 956 aa16.45■□□□□ 0.22
CHRNA4-202ENST00000463705 SMG6Q86US8 1419 aaKnown RBP16.45■□□□□ 0.22
CHRNA4-202ENST00000463705 KIF14Q15058 1648 aa16.44■□□□□ 0.22
CHRNA4-202ENST00000463705 NECTIN2Q92692 538 aa16.44■□□□□ 0.22
CHRNA4-202ENST00000463705 ZNF692Q9BU19 519 aaPredicted RBP16.44■□□□□ 0.22
CHRNA4-202ENST00000463705 NLRP6P59044 892 aa16.44■□□□□ 0.22
CHRNA4-202ENST00000463705 AKAP17AQ02040 695 aaKnown RBP16.44■□□□□ 0.22
CHRNA4-202ENST00000463705 TXNDC2Q86VQ3 553 aa16.44■□□□□ 0.22
CHRNA4-202ENST00000463705 NOL10Q9BSC4 688 aaKnown RBP16.44■□□□□ 0.22
CHRNA4-202ENST00000463705 WDR97A6NE52 1622 aa16.44■□□□□ 0.22
CHRNA4-202ENST00000463705 NINLQ9Y2I6 1382 aa16.44■□□□□ 0.22
CHRNA4-202ENST00000463705 PRAM1Q96QH2 718 aa16.43■□□□□ 0.22
CHRNA4-202ENST00000463705 THEMISQ8N1K5 641 aaPredicted RBP16.43■□□□□ 0.22
CHRNA4-202ENST00000463705 PNISRQ8TF01 805 aaKnown RBP16.43■□□□□ 0.22
CHRNA4-202ENST00000463705 POGZQ7Z3K3 1410 aa16.43■□□□□ 0.22
CHRNA4-202ENST00000463705 SLC12A5Q9H2X9 1139 aa16.42■□□□□ 0.22
CHRNA4-202ENST00000463705 CAMSAP2Q08AD1 1489 aa16.41■□□□□ 0.22
CHRNA4-202ENST00000463705 FOXD4L5Q5VV16 416 aaPredicted RBP16.41■□□□□ 0.22
CHRNA4-202ENST00000463705 FOXD4L4Q8WXT5 416 aaPredicted RBP16.41■□□□□ 0.22
CHRNA4-202ENST00000463705 ANO2Q9NQ90 1003 aa16.41■□□□□ 0.22
CHRNA4-202ENST00000463705 PTPN23Q9H3S7 1636 aa16.41■□□□□ 0.22
CHRNA4-202ENST00000463705 ATAD2Q6PL18 1390 aa16.41■□□□□ 0.22
CHRNA4-202ENST00000463705 CT47B1P0C2W7 299 aaPredicted RBP16.41■□□□□ 0.22
CHRNA4-202ENST00000463705 CCDC30Q5VVM6 783 aa16.41■□□□□ 0.22
CHRNA4-202ENST00000463705 DDX49Q9Y6V7 483 aaKnown RBP16.4■□□□□ 0.22
CHRNA4-202ENST00000463705 PLEKHO1Q53GL0 409 aaPredicted RBP16.4■□□□□ 0.22
CHRNA4-202ENST00000463705 GRIN2AQ12879 1464 aa16.4■□□□□ 0.22
CHRNA4-202ENST00000463705 LNPKQ9C0E8 428 aa16.4■□□□□ 0.22
CHRNA4-202ENST00000463705 GNAI3P08754 354 aa16.39■□□□□ 0.21
CHRNA4-202ENST00000463705 NLRP2Q9NX02 1062 aa16.39■□□□□ 0.21
CHRNA4-202ENST00000463705 CHMP5Q9NZZ3 219 aa16.39■□□□□ 0.21
CHRNA4-202ENST00000463705 UBTFL1P0CB47 393 aaPredicted RBP16.39■□□□□ 0.21
CHRNA4-202ENST00000463705 MARCH6O60337 910 aa16.39■□□□□ 0.21
CHRNA4-202ENST00000463705 RIC3Q7Z5B4 369 aa16.39■□□□□ 0.21
CHRNA4-202ENST00000463705 WWC1Q8IX03 1113 aa16.39■□□□□ 0.21
CHRNA4-202ENST00000463705 CDC45O75419 566 aa16.38■□□□□ 0.21
CHRNA4-202ENST00000463705 TRIM29Q14134 588 aa16.38■□□□□ 0.21
CHRNA4-202ENST00000463705 CDK19Q9BWU1 502 aa16.38■□□□□ 0.21
CHRNA4-202ENST00000463705 BIVM-ERCC5R4GMW8 1640 aa16.38■□□□□ 0.21
CHRNA4-202ENST00000463705 RTEL1-TNFRSF6BF6WH68 1400 aa16.38■□□□□ 0.21
CHRNA4-202ENST00000463705 PRKAR2BP31323 418 aa16.38■□□□□ 0.21
CHRNA4-202ENST00000463705 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
CHRNA4-202ENST00000463705 ABTB2Q8N961 1025 aa16.38■□□□□ 0.21
CHRNA4-202ENST00000463705 TRDNQ13061 729 aa16.37■□□□□ 0.21
CHRNA4-202ENST00000463705 GSE1Q14687 1217 aa16.37■□□□□ 0.21
CHRNA4-202ENST00000463705 ARHGEF11O15085 1522 aa16.37■□□□□ 0.21
CHRNA4-202ENST00000463705 WDR63Q8IWG1 891 aa16.36■□□□□ 0.21
CHRNA4-202ENST00000463705 NUTM2GQ5VZR2 741 aa16.36■□□□□ 0.21
CHRNA4-202ENST00000463705 NUCB2P80303 420 aa16.36■□□□□ 0.21
CHRNA4-202ENST00000463705 EXOSC9Q06265 439 aaKnown RBP16.36■□□□□ 0.21
CHRNA4-202ENST00000463705 ABCC5O15440 1437 aa16.35■□□□□ 0.21
CHRNA4-202ENST00000463705 RAPGEF3O95398 923 aa16.35■□□□□ 0.21
CHRNA4-202ENST00000463705 SYTL4Q96C24 671 aaPredicted RBP16.35■□□□□ 0.21
CHRNA4-202ENST00000463705 GOLGA6L19H0YKK7 550 aa16.34■□□□□ 0.21
CHRNA4-202ENST00000463705 MEX3CQ5U5Q3 659 aaKnown RBP16.34■□□□□ 0.21
CHRNA4-202ENST00000463705 VPS37DQ86XT2 251 aa16.34■□□□□ 0.21
CHRNA4-202ENST00000463705 AKNAQ7Z591 1439 aa16.34■□□□□ 0.21
CHRNA4-202ENST00000463705 ESCO1Q5FWF5 840 aa16.34■□□□□ 0.21
CHRNA4-202ENST00000463705 C22orf23Q9BZE7 217 aa16.34■□□□□ 0.21
CHRNA4-202ENST00000463705 CABP1Q9NZU7 370 aa16.34■□□□□ 0.21
CHRNA4-202ENST00000463705 CPLX1O14810 134 aa16.34■□□□□ 0.21
CHRNA4-202ENST00000463705 TPM3P06753 285 aa16.34■□□□□ 0.21
CHRNA4-202ENST00000463705 CCDC184Q52MB2 194 aa16.34■□□□□ 0.21
CHRNA4-202ENST00000463705 PLB1Q6P1J6 1458 aa16.33■□□□□ 0.21
CHRNA4-202ENST00000463705 PROSER2Q86WR7 435 aaPredicted RBP16.33■□□□□ 0.21
CHRNA4-202ENST00000463705 GCC1Q96CN9 775 aa16.33■□□□□ 0.2
CHRNA4-202ENST00000463705 TPM2P07951 284 aa16.32■□□□□ 0.2
CHRNA4-202ENST00000463705 TWISTNBQ3B726 338 aaPredicted RBP16.32■□□□□ 0.2
CHRNA4-202ENST00000463705 TPD52L1Q16890 204 aaPredicted RBP16.32■□□□□ 0.2
CHRNA4-202ENST00000463705 APPP05067 770 aa16.32■□□□□ 0.2
CHRNA4-202ENST00000463705 MCTP1Q6DN14 999 aa16.32■□□□□ 0.2
CHRNA4-202ENST00000463705 TRIM34Q9BYJ4 488 aa16.32■□□□□ 0.2
CHRNA4-202ENST00000463705 CNTROBQ8N137 903 aa16.32■□□□□ 0.2
CHRNA4-202ENST00000463705 ERICH2A1L162 156 aa16.31■□□□□ 0.2
CHRNA4-202ENST00000463705 BECN2A8MW95 431 aa16.31■□□□□ 0.2
CHRNA4-202ENST00000463705 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
CHRNA4-202ENST00000463705 NOC3LQ8WTT2 800 aaKnown RBP16.31■□□□□ 0.2
CHRNA4-202ENST00000463705 HOOK1Q9UJC3 728 aaKnown RBP16.31■□□□□ 0.2
CHRNA4-202ENST00000463705 SMC3Q9UQE7 1217 aa16.31■□□□□ 0.2
CHRNA4-202ENST00000463705 VPS53Q5VIR6 699 aa16.3■□□□□ 0.2
CHRNA4-202ENST00000463705 HIP1O00291 1037 aa16.3■□□□□ 0.2
CHRNA4-202ENST00000463705 TATP17735 454 aaPredicted RBP16.3■□□□□ 0.2
CHRNA4-202ENST00000463705 TPM1P09493 284 aa16.3■□□□□ 0.2
CHRNA4-202ENST00000463705 FOXD4L6Q3SYB3 417 aaPredicted RBP16.3■□□□□ 0.2
CHRNA4-202ENST00000463705 FOXD4L3Q6VB84 417 aaPredicted RBP16.3■□□□□ 0.2
CHRNA4-202ENST00000463705 CCDC47Q96A33 483 aaKnown RBP16.3■□□□□ 0.2
CHRNA4-202ENST00000463705 MSH5O43196 834 aa16.29■□□□□ 0.2
CHRNA4-202ENST00000463705 PSMA5P28066 241 aa16.29■□□□□ 0.2
CHRNA4-202ENST00000463705 CD109Q6YHK3 1445 aa16.29■□□□□ 0.2
CHRNA4-202ENST00000463705 BCAR3O75815 825 aa16.29■□□□□ 0.2
CHRNA4-202ENST00000463705 TSR1Q2NL82 804 aaKnown RBP16.29■□□□□ 0.2
CHRNA4-202ENST00000463705 AIMP1Q12904 312 aaKnown RBP16.29■□□□□ 0.2
CHRNA4-202ENST00000463705 ADGRL1O94910 1474 aa16.29■□□□□ 0.2
CHRNA4-202ENST00000463705 CLASRPQ8N2M8 674 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms