RNA–Protein interactions for RNA: ENST00000463372.5

C9orf3-211, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 919 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-211ENST00000463372 ORAI2Q96SN7 254 aa21.42■■□□□ 1.02
C9orf3-211ENST00000463372 MYOM3Q5VTT5 1437 aa21.41■■□□□ 1.02
C9orf3-211ENST00000463372 SLIT2O94813 1529 aa21.39■■□□□ 1.02
C9orf3-211ENST00000463372 CROCC2H7BZ55 1655 aa21.39■■□□□ 1.01
C9orf3-211ENST00000463372 CEP350Q5VT06 3117 aa21.38■■□□□ 1.01
C9orf3-211ENST00000463372 A0A0G2JS52 829 aa21.37■■□□□ 1.01
C9orf3-211ENST00000463372 MYT1Q01538 1121 aa21.37■■□□□ 1.01
C9orf3-211ENST00000463372 CCDC9Q9Y3X0 531 aaKnown RBP21.37■■□□□ 1.01
C9orf3-211ENST00000463372 ONECUT3O60422 494 aaPredicted RBP21.36■■□□□ 1.01
C9orf3-211ENST00000463372 CAMTA1Q9Y6Y1 1673 aa21.36■■□□□ 1.01
C9orf3-211ENST00000463372 NINLQ9Y2I6 1382 aa21.36■■□□□ 1.01
C9orf3-211ENST00000463372 PTPN23Q9H3S7 1636 aa21.35■■□□□ 1.01
C9orf3-211ENST00000463372 CHD4Q14839 1912 aa21.33■■□□□ 1.01
C9orf3-211ENST00000463372 NPHP3Q7Z494 1330 aa21.33■■□□□ 1.01
C9orf3-211ENST00000463372 VPS72Q15906 364 aa21.33■■□□□ 1.01
C9orf3-211ENST00000463372 EZH2Q15910 746 aaKnown RBP21.32■■□□□ 1
C9orf3-211ENST00000463372 NRXN3Q9Y4C0 1643 aa21.32■■□□□ 1
C9orf3-211ENST00000463372 DISP2A7MBM2 1401 aa21.31■■□□□ 1
C9orf3-211ENST00000463372 TNS1Q9HBL0 1735 aaKnown RBP21.3■■□□□ 1
C9orf3-211ENST00000463372 SPON1Q9HCB6 807 aa21.29■■□□□ 1
C9orf3-211ENST00000463372 METP08581 1390 aa21.28■■□□□ 1
C9orf3-211ENST00000463372 PXDNQ92626 1479 aa21.27■■□□□ 1
C9orf3-211ENST00000463372 NWD2Q9ULI1 1742 aa21.27■■□□□ 1
C9orf3-211ENST00000463372 USP32Q8NFA0 1604 aa21.27■■□□□ 1
C9orf3-211ENST00000463372 PLCH1Q4KWH8 1693 aa21.26■□□□□ 0.99
C9orf3-211ENST00000463372 ABCC5O15440 1437 aa21.26■□□□□ 0.99
C9orf3-211ENST00000463372 ADGRB2O60241 1585 aa21.26■□□□□ 0.99
C9orf3-211ENST00000463372 UTRNP46939 3433 aa21.26■□□□□ 0.99
C9orf3-211ENST00000463372 XPCQ01831 940 aaPredicted RBP21.25■□□□□ 0.99
C9orf3-211ENST00000463372 ESCO1Q5FWF5 840 aa21.24■□□□□ 0.99
C9orf3-211ENST00000463372 ANKRD30AQ9BXX3 1397 aa21.23■□□□□ 0.99
C9orf3-211ENST00000463372 KCNQ2O43526 872 aa21.23■□□□□ 0.99
C9orf3-211ENST00000463372 HAP1P54257 671 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-211ENST00000463372 ADGRL2O95490 1459 aa21.22■□□□□ 0.99
C9orf3-211ENST00000463372 NBPF8Q3BBV2 869 aa21.22■□□□□ 0.99
C9orf3-211ENST00000463372 NBPF14Q5TI25 921 aa21.22■□□□□ 0.99
C9orf3-211ENST00000463372 CAMKK2Q96RR4 588 aa21.22■□□□□ 0.99
C9orf3-211ENST00000463372 FOXO3O43524 673 aa21.21■□□□□ 0.99
C9orf3-211ENST00000463372 FAM182BQ5T319 152 aa21.21■□□□□ 0.99
C9orf3-211ENST00000463372 LRPPRCP42704 1394 aaKnown RBP21.21■□□□□ 0.99
C9orf3-211ENST00000463372 FAM98CQ17RN3 349 aaKnown RBP21.2■□□□□ 0.98
C9orf3-211ENST00000463372 PARD3Q8TEW0 1356 aa21.2■□□□□ 0.98
C9orf3-211ENST00000463372 IQGAP3Q86VI3 1631 aa21.19■□□□□ 0.98
C9orf3-211ENST00000463372 CHIC2Q9UKJ5 165 aa21.18■□□□□ 0.98
C9orf3-211ENST00000463372 DAPK1P53355 1430 aa21.18■□□□□ 0.98
C9orf3-211ENST00000463372 RREB1Q92766 1687 aa21.17■□□□□ 0.98
C9orf3-211ENST00000463372 NUP188Q5SRE5 1749 aa21.17■□□□□ 0.98
C9orf3-211ENST00000463372 GIGYF1O75420 1035 aaPredicted RBP21.16■□□□□ 0.98
C9orf3-211ENST00000463372 E9PCH4 1651 aa21.15■□□□□ 0.98
C9orf3-211ENST00000463372 APBA3O96018 575 aa21.14■□□□□ 0.97
C9orf3-211ENST00000463372 TRIM37O94972 964 aa21.13■□□□□ 0.97
C9orf3-211ENST00000463372 SPATA31A3Q5VYP0 1347 aa21.12■□□□□ 0.97
C9orf3-211ENST00000463372 ZNF326Q5BKZ1 582 aaKnown RBP21.11■□□□□ 0.97
C9orf3-211ENST00000463372 ROBO2Q9HCK4 1378 aa21.1■□□□□ 0.97
C9orf3-211ENST00000463372 NRAPQ86VF7 1730 aa21.07■□□□□ 0.96
C9orf3-211ENST00000463372 PLEKHG5O94827 1062 aa21.07■□□□□ 0.96
C9orf3-211ENST00000463372 FAM196AQ6ZSG2 479 aa21.07■□□□□ 0.96
C9orf3-211ENST00000463372 CDC42BPGQ6DT37 1551 aa21.06■□□□□ 0.96
C9orf3-211ENST00000463372 CABLES1Q8TDN4 633 aa21.06■□□□□ 0.96
C9orf3-211ENST00000463372 NRKQ7Z2Y5 1582 aa21.06■□□□□ 0.96
C9orf3-211ENST00000463372 HFM1A2PYH4 1435 aa21.05■□□□□ 0.96
C9orf3-211ENST00000463372 ABCA3Q99758 1704 aa21.04■□□□□ 0.96
C9orf3-211ENST00000463372 CCDC144AA2RUR9 1427 aa21.04■□□□□ 0.96
C9orf3-211ENST00000463372 ANKRD50Q9ULJ7 1429 aa21.04■□□□□ 0.96
C9orf3-211ENST00000463372 THSD7AQ9UPZ6 1657 aa21.03■□□□□ 0.96
C9orf3-211ENST00000463372 FAM83GA6ND36 823 aa21.02■□□□□ 0.96
C9orf3-211ENST00000463372 KRT28Q7Z3Y7 464 aa21.01■□□□□ 0.95
C9orf3-211ENST00000463372 BTG4Q9NY30 223 aa21.01■□□□□ 0.95
C9orf3-211ENST00000463372 MYOM1P52179 1685 aa21.01■□□□□ 0.95
C9orf3-211ENST00000463372 KIF1AQ12756 1690 aa21.01■□□□□ 0.95
C9orf3-211ENST00000463372 NUTM2FA1L443 756 aa21■□□□□ 0.95
C9orf3-211ENST00000463372 KANK4Q5T7N3 995 aaPredicted RBP20.99■□□□□ 0.95
C9orf3-211ENST00000463372 TNS3Q68CZ2 1445 aa20.98■□□□□ 0.95
C9orf3-211ENST00000463372 SPATA31A5Q5VU36 1347 aa20.98■□□□□ 0.95
C9orf3-211ENST00000463372 SPATA31A7Q8IWB4 1347 aa20.98■□□□□ 0.95
C9orf3-211ENST00000463372 LMOD2Q6P5Q4 547 aa20.97■□□□□ 0.95
C9orf3-211ENST00000463372 PRAG1Q86YV5 1406 aa20.96■□□□□ 0.95
C9orf3-211ENST00000463372 CASZ1Q86V15 1759 aa20.95■□□□□ 0.94
C9orf3-211ENST00000463372 PSME1Q06323 249 aa20.95■□□□□ 0.94
C9orf3-211ENST00000463372 SYT17Q9BSW7 474 aa20.95■□□□□ 0.94
C9orf3-211ENST00000463372 COL14A1Q05707 1796 aaKnown RBP20.95■□□□□ 0.94
C9orf3-211ENST00000463372 NEXMIFQ5QGS0 1516 aa20.94■□□□□ 0.94
C9orf3-211ENST00000463372 FHDC1Q9C0D6 1143 aaPredicted RBP20.93■□□□□ 0.94
C9orf3-211ENST00000463372 NAIPQ13075 1403 aa20.92■□□□□ 0.94
C9orf3-211ENST00000463372 ARHGEF10O15013 1369 aa20.91■□□□□ 0.94
C9orf3-211ENST00000463372 DLC1Q96QB1 1528 aa20.9■□□□□ 0.94
C9orf3-211ENST00000463372 ZBTB7AO95365 584 aa20.9■□□□□ 0.94
C9orf3-211ENST00000463372 PTGER2P43116 358 aa20.88■□□□□ 0.93
C9orf3-211ENST00000463372 RRBP1Q9P2E9 1410 aaKnown RBP20.87■□□□□ 0.93
C9orf3-211ENST00000463372 FMN2Q9NZ56 1722 aa20.87■□□□□ 0.93
C9orf3-211ENST00000463372 PDE3BQ13370 1112 aa20.87■□□□□ 0.93
C9orf3-211ENST00000463372 ATF5Q9Y2D1 282 aaPredicted RBP20.87■□□□□ 0.93
C9orf3-211ENST00000463372 RGPD8O14715 1765 aaPredicted RBP20.87■□□□□ 0.93
C9orf3-211ENST00000463372 SBNO1A3KN83 1393 aa20.85■□□□□ 0.93
C9orf3-211ENST00000463372 KIF1BO60333 1816 aa20.85■□□□□ 0.93
C9orf3-211ENST00000463372 VGFO15240 615 aaPredicted RBP20.84■□□□□ 0.93
C9orf3-211ENST00000463372 GPR162Q16538 588 aa20.84■□□□□ 0.93
C9orf3-211ENST00000463372 SHANK3Q9BYB0 1731 aa20.84■□□□□ 0.93
C9orf3-211ENST00000463372 HSPA6P17066 643 aa20.83■□□□□ 0.93
C9orf3-211ENST00000463372 PDGFDQ9GZP0 370 aaPredicted RBP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms