RNA–Protein interactions for RNA: ENST00000463029.5

TMEM254-207, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best)

Gene TMEM254, Length 847 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-207ENST00000463029 NRXN3Q9Y4C0 1643 aa12.41□□□□□ -0.42
TMEM254-207ENST00000463029 FXR2P51116 673 aaKnown RBP eCLIP12.41□□□□□ -0.42
TMEM254-207ENST00000463029 BRINP3Q76B58 766 aa12.41□□□□□ -0.42
TMEM254-207ENST00000463029 TRIM52Q96A61 297 aa12.41□□□□□ -0.42
TMEM254-207ENST00000463029 LRP6O75581 1613 aa12.4□□□□□ -0.42
TMEM254-207ENST00000463029 CLTCL1P53675 1640 aa12.4□□□□□ -0.42
TMEM254-207ENST00000463029 DCCP43146 1447 aa12.4□□□□□ -0.42
TMEM254-207ENST00000463029 PROM2Q8N271 834 aa12.4□□□□□ -0.42
TMEM254-207ENST00000463029 XRN1Q8IZH2 1706 aaKnown RBP12.4□□□□□ -0.43
TMEM254-207ENST00000463029 NEXMIFQ5QGS0 1516 aa12.39□□□□□ -0.43
TMEM254-207ENST00000463029 FKBP8Q14318 412 aa12.39□□□□□ -0.43
TMEM254-207ENST00000463029 NUTM2BA6NNL0 878 aaPredicted RBP12.38□□□□□ -0.43
TMEM254-207ENST00000463029 NUTM2EB1AL46 878 aaPredicted RBP12.38□□□□□ -0.43
TMEM254-207ENST00000463029 NUTM2AQ8IVF1 878 aaPredicted RBP12.38□□□□□ -0.43
TMEM254-207ENST00000463029 MST1RQ04912 1400 aa12.37□□□□□ -0.43
TMEM254-207ENST00000463029 ASXL1Q8IXJ9 1541 aa12.37□□□□□ -0.43
TMEM254-207ENST00000463029 HFM1A2PYH4 1435 aa12.37□□□□□ -0.43
TMEM254-207ENST00000463029 ADGRL3Q9HAR2 1447 aa12.37□□□□□ -0.43
TMEM254-207ENST00000463029 VGFO15240 615 aaPredicted RBP12.36□□□□□ -0.43
TMEM254-207ENST00000463029 ZNF772Q68DY9 489 aaPredicted RBP12.36□□□□□ -0.43
TMEM254-207ENST00000463029 SHPRHQ149N8 1683 aa12.35□□□□□ -0.43
TMEM254-207ENST00000463029 DDX17Q92841 729 aaKnown RBP12.34□□□□□ -0.43
TMEM254-207ENST00000463029 SETD5Q9C0A6 1442 aa12.34□□□□□ -0.43
TMEM254-207ENST00000463029 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
TMEM254-207ENST00000463029 KIF1BO60333 1816 aa12.33□□□□□ -0.44
TMEM254-207ENST00000463029 LRRC59Q96AG4 307 aaKnown RBP12.33□□□□□ -0.44
TMEM254-207ENST00000463029 RPGRIP1LQ68CZ1 1315 aa12.33□□□□□ -0.44
TMEM254-207ENST00000463029 ROBO2Q9HCK4 1378 aa12.32□□□□□ -0.44
TMEM254-207ENST00000463029 PTCH1Q13635 1447 aa12.32□□□□□ -0.44
TMEM254-207ENST00000463029 NALCNQ8IZF0 1738 aa12.31□□□□□ -0.44
TMEM254-207ENST00000463029 NHSL1Q5SYE7 1610 aa12.31□□□□□ -0.44
TMEM254-207ENST00000463029 RXRBP28702 533 aa12.31□□□□□ -0.44
TMEM254-207ENST00000463029 AFF2P51816 1311 aa12.31□□□□□ -0.44
TMEM254-207ENST00000463029 C1orf167Q5SNV9 1468 aa12.3□□□□□ -0.44
TMEM254-207ENST00000463029 PNPLA6Q8IY17 1366 aa12.3□□□□□ -0.44
TMEM254-207ENST00000463029 C8orf37Q96NL8 207 aa12.29□□□□□ -0.44
TMEM254-207ENST00000463029 ORAI2Q96SN7 254 aa12.29□□□□□ -0.44
TMEM254-207ENST00000463029 CHADLQ6NUI6 762 aa12.28□□□□□ -0.44
TMEM254-207ENST00000463029 CCDC144AA2RUR9 1427 aa12.28□□□□□ -0.44
TMEM254-207ENST00000463029 ADAMTS2O95450 1211 aa12.27□□□□□ -0.45
TMEM254-207ENST00000463029 PRR29P0C7W0 189 aa12.27□□□□□ -0.45
TMEM254-207ENST00000463029 RGL3Q3MIN7 710 aa12.27□□□□□ -0.45
TMEM254-207ENST00000463029 ADGRF5Q8IZF2 1346 aa12.27□□□□□ -0.45
TMEM254-207ENST00000463029 PRAG1Q86YV5 1406 aa12.27□□□□□ -0.45
TMEM254-207ENST00000463029 PRKAR2AP13861 404 aaKnown RBP12.26□□□□□ -0.45
TMEM254-207ENST00000463029 UPF1Q92900 1129 aaKnown RBP eCLIP12.26□□□□□ -0.45
TMEM254-207ENST00000463029 MPHOSPH9Q99550 1183 aa12.26□□□□□ -0.45
TMEM254-207ENST00000463029 PPLO60437 1756 aa12.25□□□□□ -0.45
TMEM254-207ENST00000463029 NGLY1Q96IV0 654 aa12.25□□□□□ -0.45
TMEM254-207ENST00000463029 STK26Q9P289 416 aa12.25□□□□□ -0.45
TMEM254-207ENST00000463029 SOS2Q07890 1332 aaPredicted RBP12.25□□□□□ -0.45
TMEM254-207ENST00000463029 CDK12Q9NYV4 1490 aaPredicted RBP12.25□□□□□ -0.45
TMEM254-207ENST00000463029 ESCO1Q5FWF5 840 aa12.24□□□□□ -0.45
TMEM254-207ENST00000463029 QTRT2Q9H974 415 aaKnown RBP12.24□□□□□ -0.45
TMEM254-207ENST00000463029 SPATA31E1Q6ZUB1 1445 aa12.23□□□□□ -0.45
TMEM254-207ENST00000463029 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
TMEM254-207ENST00000463029 RBM6P78332 1123 aaKnown RBP12.23□□□□□ -0.45
TMEM254-207ENST00000463029 LAMC1P11047 1609 aa12.22□□□□□ -0.45
TMEM254-207ENST00000463029 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
TMEM254-207ENST00000463029 WAPLQ7Z5K2 1190 aa12.22□□□□□ -0.45
TMEM254-207ENST00000463029 CDC42BPGQ6DT37 1551 aa12.22□□□□□ -0.45
TMEM254-207ENST00000463029 RGS12O14924 1447 aa12.21□□□□□ -0.45
TMEM254-207ENST00000463029 LRPPRCP42704 1394 aaKnown RBP12.21□□□□□ -0.45
TMEM254-207ENST00000463029 NPHP3Q7Z494 1330 aa12.21□□□□□ -0.45
TMEM254-207ENST00000463029 NUTM2FA1L443 756 aa12.21□□□□□ -0.45
TMEM254-207ENST00000463029 XPCQ01831 940 aaPredicted RBP12.21□□□□□ -0.45
TMEM254-207ENST00000463029 FOXO3O43524 673 aa12.2□□□□□ -0.46
TMEM254-207ENST00000463029 USP21Q9UK80 565 aa12.2□□□□□ -0.46
TMEM254-207ENST00000463029 TECPR2O15040 1411 aa12.2□□□□□ -0.46
TMEM254-207ENST00000463029 ABCC11Q96J66 1382 aa12.19□□□□□ -0.46
TMEM254-207ENST00000463029 PLEKHH1Q9ULM0 1364 aa12.19□□□□□ -0.46
TMEM254-207ENST00000463029 PIK3C2GO75747 1445 aa12.19□□□□□ -0.46
TMEM254-207ENST00000463029 PXDNQ92626 1479 aa12.18□□□□□ -0.46
TMEM254-207ENST00000463029 YTHDC2Q9H6S0 1430 aaKnown RBP12.18□□□□□ -0.46
TMEM254-207ENST00000463029 FNBP4Q8N3X1 1017 aaPredicted RBP12.17□□□□□ -0.46
TMEM254-207ENST00000463029 CREBZFQ9NS37 354 aa12.17□□□□□ -0.46
TMEM254-207ENST00000463029 TRPC5Q9UL62 973 aaPredicted RBP12.17□□□□□ -0.46
TMEM254-207ENST00000463029 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
TMEM254-207ENST00000463029 MYOM2P54296 1465 aa12.16□□□□□ -0.46
TMEM254-207ENST00000463029 COL22A1Q8NFW1 1626 aaPredicted RBP12.16□□□□□ -0.46
TMEM254-207ENST00000463029 ACIN1Q9UKV3 1341 aaKnown RBP12.15□□□□□ -0.46
TMEM254-207ENST00000463029 CFAP70Q5T0N1 1121 aa12.15□□□□□ -0.46
TMEM254-207ENST00000463029 C14orf93Q9H972 538 aaKnown RBP12.15□□□□□ -0.46
TMEM254-207ENST00000463029 ATRNO75882 1429 aa12.14□□□□□ -0.47
TMEM254-207ENST00000463029 ATAD2Q6PL18 1390 aa12.14□□□□□ -0.47
TMEM254-207ENST00000463029 KNDC1Q76NI1 1749 aa12.14□□□□□ -0.47
TMEM254-207ENST00000463029 SAFB2Q14151 953 aaKnown RBP eCLIP12.13□□□□□ -0.47
TMEM254-207ENST00000463029 SIRT1Q96EB6 747 aa12.13□□□□□ -0.47
TMEM254-207ENST00000463029 DHX57Q6P158 1386 aaKnown RBP12.13□□□□□ -0.47
TMEM254-207ENST00000463029 PRAM1Q96QH2 718 aa12.12□□□□□ -0.47
TMEM254-207ENST00000463029 BCL9LQ86UU0 1499 aa12.12□□□□□ -0.47
TMEM254-207ENST00000463029 NRXN1Q9ULB1 1477 aa12.12□□□□□ -0.47
TMEM254-207ENST00000463029 SPATA31A3Q5VYP0 1347 aa12.11□□□□□ -0.47
TMEM254-207ENST00000463029 FMN2Q9NZ56 1722 aa12.11□□□□□ -0.47
TMEM254-207ENST00000463029 RAB3GAP2Q9H2M9 1393 aa12.11□□□□□ -0.47
TMEM254-207ENST00000463029 KRT28Q7Z3Y7 464 aa12.11□□□□□ -0.47
TMEM254-207ENST00000463029 POGKQ9P215 609 aa12.11□□□□□ -0.47
TMEM254-207ENST00000463029 PHF8Q9UPP1 1060 aa12.11□□□□□ -0.47
TMEM254-207ENST00000463029 KIF1AQ12756 1690 aa12.1□□□□□ -0.47
TMEM254-207ENST00000463029 PLEKHG5O94827 1062 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms