RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 SLIT1O75093 1534 aa16.68■□□□□ 0.26
COL4A6-204ENST00000461897 ARHGAP23Q9P227 1491 aa16.68■□□□□ 0.26
COL4A6-204ENST00000461897 METP08581 1390 aa16.67■□□□□ 0.26
COL4A6-204ENST00000461897 HDGFP51858 240 aaKnown RBP16.67■□□□□ 0.26
COL4A6-204ENST00000461897 SAFB2Q14151 953 aaKnown RBP eCLIP16.67■□□□□ 0.26
COL4A6-204ENST00000461897 CC2D1BQ5T0F9 858 aaKnown RBP16.67■□□□□ 0.26
COL4A6-204ENST00000461897 PRAM1Q96QH2 718 aa16.67■□□□□ 0.26
COL4A6-204ENST00000461897 KNDC1Q76NI1 1749 aa16.66■□□□□ 0.26
COL4A6-204ENST00000461897 AMER1Q5JTC6 1135 aaPredicted RBP16.65■□□□□ 0.26
COL4A6-204ENST00000461897 EVC2Q86UK5 1308 aa16.65■□□□□ 0.26
COL4A6-204ENST00000461897 ADAMTS13Q76LX8 1427 aa16.65■□□□□ 0.26
COL4A6-204ENST00000461897 LTKP29376 864 aa16.65■□□□□ 0.26
COL4A6-204ENST00000461897 B4GALNT3Q6L9W6 998 aa16.65■□□□□ 0.26
COL4A6-204ENST00000461897 PLEKHG1Q9ULL1 1385 aa16.65■□□□□ 0.26
COL4A6-204ENST00000461897 KNSTRNQ9Y448 316 aa16.65■□□□□ 0.26
COL4A6-204ENST00000461897 CEP170BQ9Y4F5 1589 aaPredicted RBP16.65■□□□□ 0.26
COL4A6-204ENST00000461897 ABCC11Q96J66 1382 aa16.64■□□□□ 0.25
COL4A6-204ENST00000461897 PUS7Q96PZ0 661 aaKnown RBP16.64■□□□□ 0.25
COL4A6-204ENST00000461897 NPC1L1Q9UHC9 1359 aa16.63■□□□□ 0.25
COL4A6-204ENST00000461897 TECPR2O15040 1411 aa16.62■□□□□ 0.25
COL4A6-204ENST00000461897 NLRP13Q86W25 1043 aa16.62■□□□□ 0.25
COL4A6-204ENST00000461897 CARD14Q9BXL6 1004 aa16.62■□□□□ 0.25
COL4A6-204ENST00000461897 POGKQ9P215 609 aa16.62■□□□□ 0.25
COL4A6-204ENST00000461897 CPS1P31327 1500 aa16.62■□□□□ 0.25
COL4A6-204ENST00000461897 INSRP06213 1382 aa16.61■□□□□ 0.25
COL4A6-204ENST00000461897 PLEKHH1Q9ULM0 1364 aa16.61■□□□□ 0.25
COL4A6-204ENST00000461897 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
COL4A6-204ENST00000461897 MED14O60244 1454 aa16.61■□□□□ 0.25
COL4A6-204ENST00000461897 ZNF142P52746 1687 aaPredicted RBP16.61■□□□□ 0.25
COL4A6-204ENST00000461897 TMC1Q8TDI8 760 aa16.61■□□□□ 0.25
COL4A6-204ENST00000461897 SLC12A5Q9H2X9 1139 aa16.61■□□□□ 0.25
COL4A6-204ENST00000461897 CABP2Q9NPB3 220 aa16.61■□□□□ 0.25
COL4A6-204ENST00000461897 TXNDC2Q86VQ3 553 aa16.6■□□□□ 0.25
COL4A6-204ENST00000461897 USP32Q8NFA0 1604 aa16.59■□□□□ 0.25
COL4A6-204ENST00000461897 WAPLQ7Z5K2 1190 aa16.59■□□□□ 0.25
COL4A6-204ENST00000461897 THEMISQ8N1K5 641 aaPredicted RBP16.59■□□□□ 0.25
COL4A6-204ENST00000461897 NSD3Q9BZ95 1437 aa16.58■□□□□ 0.24
COL4A6-204ENST00000461897 EID1Q9Y6B2 187 aa16.58■□□□□ 0.24
COL4A6-204ENST00000461897 FAM135BQ49AJ0 1406 aa16.57■□□□□ 0.24
COL4A6-204ENST00000461897 ATAD2Q6PL18 1390 aa16.56■□□□□ 0.24
COL4A6-204ENST00000461897 ANKRD36BQ8N2N9 1353 aa16.56■□□□□ 0.24
COL4A6-204ENST00000461897 NINLQ9Y2I6 1382 aa16.56■□□□□ 0.24
COL4A6-204ENST00000461897 SRPK2P78362 688 aaKnown RBP16.56■□□□□ 0.24
COL4A6-204ENST00000461897 DIP2AQ14689 1571 aa16.55■□□□□ 0.24
COL4A6-204ENST00000461897 PTPRUQ92729 1446 aa16.54■□□□□ 0.24
COL4A6-204ENST00000461897 ROBO2Q9HCK4 1378 aa16.54■□□□□ 0.24
COL4A6-204ENST00000461897 PPP2R1AP30153 589 aa16.54■□□□□ 0.24
COL4A6-204ENST00000461897 SIRT1Q96EB6 747 aa16.54■□□□□ 0.24
COL4A6-204ENST00000461897 CDK19Q9BWU1 502 aa16.54■□□□□ 0.24
COL4A6-204ENST00000461897 SETD1BQ9UPS6 1966 aaKnown RBP16.54■□□□□ 0.24
COL4A6-204ENST00000461897 CD163L1Q9NR16 1453 aa16.53■□□□□ 0.24
COL4A6-204ENST00000461897 PDE3BQ13370 1112 aa16.53■□□□□ 0.24
COL4A6-204ENST00000461897 SLC26A8Q96RN1 970 aa16.53■□□□□ 0.24
COL4A6-204ENST00000461897 A0A1W2PP64 1363 aa16.53■□□□□ 0.24
COL4A6-204ENST00000461897 CCDC136Q96JN2 1154 aa16.5■□□□□ 0.23
COL4A6-204ENST00000461897 TBX22Q9Y458 520 aa16.5■□□□□ 0.23
COL4A6-204ENST00000461897 ADGRB2O60241 1585 aa16.5■□□□□ 0.23
COL4A6-204ENST00000461897 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.5■□□□□ 0.23
COL4A6-204ENST00000461897 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
COL4A6-204ENST00000461897 XRN1Q8IZH2 1706 aaKnown RBP16.5■□□□□ 0.23
COL4A6-204ENST00000461897 BLMP54132 1417 aaPredicted RBP16.48■□□□□ 0.23
COL4A6-204ENST00000461897 WASLO00401 505 aaPredicted RBP16.48■□□□□ 0.23
COL4A6-204ENST00000461897 CGNL1Q0VF96 1302 aa16.48■□□□□ 0.23
COL4A6-204ENST00000461897 PTCH1Q13635 1447 aa16.48■□□□□ 0.23
COL4A6-204ENST00000461897 RRP1P56182 461 aaKnown RBP16.47■□□□□ 0.23
COL4A6-204ENST00000461897 ATP7BP35670 1465 aa16.46■□□□□ 0.23
COL4A6-204ENST00000461897 NSD2O96028 1365 aa16.46■□□□□ 0.23
COL4A6-204ENST00000461897 ANKRD26Q9UPS8 1709 aa16.45■□□□□ 0.22
COL4A6-204ENST00000461897 TERF2IPQ9NYB0 399 aa16.45■□□□□ 0.22
COL4A6-204ENST00000461897 CABP1Q9NZU7 370 aa16.45■□□□□ 0.22
COL4A6-204ENST00000461897 AMOTL2Q9Y2J4 779 aa16.45■□□□□ 0.22
COL4A6-204ENST00000461897 MORC1Q86VD1 984 aa16.43■□□□□ 0.22
COL4A6-204ENST00000461897 ANKLE2Q86XL3 938 aa16.43■□□□□ 0.22
COL4A6-204ENST00000461897 RCAN3Q9UKA8 241 aa16.43■□□□□ 0.22
COL4A6-204ENST00000461897 PPIP5K1Q6PFW1 1433 aa16.43■□□□□ 0.22
COL4A6-204ENST00000461897 PIK3R4Q99570 1358 aa16.43■□□□□ 0.22
COL4A6-204ENST00000461897 TOPAZ1Q8N9V7 1692 aa16.42■□□□□ 0.22
COL4A6-204ENST00000461897 KIF20BQ96Q89 1820 aa16.42■□□□□ 0.22
COL4A6-204ENST00000461897 CDC42BPGQ6DT37 1551 aa16.42■□□□□ 0.22
COL4A6-204ENST00000461897 HDGFL2Q7Z4V5 671 aaPredicted RBP16.42■□□□□ 0.22
COL4A6-204ENST00000461897 NOP58Q9Y2X3 529 aaKnown RBP16.42■□□□□ 0.22
COL4A6-204ENST00000461897 PRR36Q9H6K5 1346 aa16.41■□□□□ 0.22
COL4A6-204ENST00000461897 CPSF1Q10570 1443 aaKnown RBP16.41■□□□□ 0.22
COL4A6-204ENST00000461897 SENP3-EIF4A1A0A087X0R7 540 aa16.41■□□□□ 0.22
COL4A6-204ENST00000461897 MON2Q7Z3U7 1717 aa16.41■□□□□ 0.22
COL4A6-204ENST00000461897 CHD2O14647 1828 aaKnown RBP16.4■□□□□ 0.22
COL4A6-204ENST00000461897 NUDT16Q96DE0 195 aaKnown RBP16.4■□□□□ 0.22
COL4A6-204ENST00000461897 NCKAP5LQ9HCH0 1330 aa16.4■□□□□ 0.22
COL4A6-204ENST00000461897 AKAP12Q02952 1782 aa16.4■□□□□ 0.22
COL4A6-204ENST00000461897 ITSN1Q15811 1721 aa16.39■□□□□ 0.21
COL4A6-204ENST00000461897 TNNT2P45379 298 aaPredicted RBP16.39■□□□□ 0.21
COL4A6-204ENST00000461897 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
COL4A6-204ENST00000461897 POLR3AO14802 1390 aaPredicted RBP16.39■□□□□ 0.21
COL4A6-204ENST00000461897 SHPRHQ149N8 1683 aa16.39■□□□□ 0.21
COL4A6-204ENST00000461897 FYB1O15117 783 aa16.38■□□□□ 0.21
COL4A6-204ENST00000461897 CCDC61Q9Y6R9 512 aa16.38■□□□□ 0.21
COL4A6-204ENST00000461897 KCNA6P17658 529 aa16.37■□□□□ 0.21
COL4A6-204ENST00000461897 BCL11AQ9H165 835 aa16.37■□□□□ 0.21
COL4A6-204ENST00000461897 GGNBP2Q9H3C7 697 aa16.37■□□□□ 0.21
COL4A6-204ENST00000461897 NPHP4O75161 1426 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms