RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 C11orf95C9JLR9 678 aaPredicted RBP13.6□□□□□ -0.23
C9orf78-203ENST00000461539 WASLO00401 505 aaPredicted RBP13.6□□□□□ -0.23
C9orf78-203ENST00000461539 SRPK2P78362 688 aaKnown RBP13.6□□□□□ -0.23
C9orf78-203ENST00000461539 CDCA8Q53HL2 280 aa13.6□□□□□ -0.23
C9orf78-203ENST00000461539 CDK19Q9BWU1 502 aa13.6□□□□□ -0.23
C9orf78-203ENST00000461539 DISP3Q9P2K9 1392 aa13.59□□□□□ -0.23
C9orf78-203ENST00000461539 CABP2Q9NPB3 220 aa13.59□□□□□ -0.23
C9orf78-203ENST00000461539 NWD1Q149M9 1564 aa13.58□□□□□ -0.23
C9orf78-203ENST00000461539 C19orf44Q9H6X5 657 aa13.58□□□□□ -0.24
C9orf78-203ENST00000461539 XRN1Q8IZH2 1706 aaKnown RBP13.58□□□□□ -0.24
C9orf78-203ENST00000461539 KIF7Q2M1P5 1343 aa13.58□□□□□ -0.24
C9orf78-203ENST00000461539 NUTM2FA1L443 756 aa13.57□□□□□ -0.24
C9orf78-203ENST00000461539 WASHC2AQ641Q2 1341 aa13.57□□□□□ -0.24
C9orf78-203ENST00000461539 NCOA3Q9Y6Q9 1424 aa13.56□□□□□ -0.24
C9orf78-203ENST00000461539 ATF3P18847 181 aa13.56□□□□□ -0.24
C9orf78-203ENST00000461539 MSH6P52701 1360 aa13.56□□□□□ -0.24
C9orf78-203ENST00000461539 CCDC7Q96M83 1385 aa13.56□□□□□ -0.24
C9orf78-203ENST00000461539 ADGRL3Q9HAR2 1447 aa13.56□□□□□ -0.24
C9orf78-203ENST00000461539 LRRC7Q96NW7 1537 aa13.55□□□□□ -0.24
C9orf78-203ENST00000461539 TMC1Q8TDI8 760 aa13.54□□□□□ -0.24
C9orf78-203ENST00000461539 NUDT16Q96DE0 195 aaKnown RBP13.54□□□□□ -0.24
C9orf78-203ENST00000461539 PUS7Q96PZ0 661 aaKnown RBP13.54□□□□□ -0.24
C9orf78-203ENST00000461539 CADPS2Q86UW7 1296 aa13.53□□□□□ -0.24
C9orf78-203ENST00000461539 ATAD2Q6PL18 1390 aa13.53□□□□□ -0.24
C9orf78-203ENST00000461539 KNDC1Q76NI1 1749 aa13.53□□□□□ -0.24
C9orf78-203ENST00000461539 TULP4Q9NRJ4 1543 aa13.52□□□□□ -0.25
C9orf78-203ENST00000461539 ARHGEF28Q8N1W1 1705 aaKnown RBP13.52□□□□□ -0.25
C9orf78-203ENST00000461539 CHD2O14647 1828 aaKnown RBP13.51□□□□□ -0.25
C9orf78-203ENST00000461539 PRR36Q9H6K5 1346 aa13.51□□□□□ -0.25
C9orf78-203ENST00000461539 DDX10Q13206 875 aaKnown RBP13.51□□□□□ -0.25
C9orf78-203ENST00000461539 CCDC61Q9Y6R9 512 aa13.51□□□□□ -0.25
C9orf78-203ENST00000461539 SLC12A5Q9H2X9 1139 aa13.5□□□□□ -0.25
C9orf78-203ENST00000461539 CABP1Q9NZU7 370 aa13.5□□□□□ -0.25
C9orf78-203ENST00000461539 LTBP4Q8N2S1 1624 aa13.5□□□□□ -0.25
C9orf78-203ENST00000461539 ESCO1Q5FWF5 840 aa13.49□□□□□ -0.25
C9orf78-203ENST00000461539 DCCP43146 1447 aa13.48□□□□□ -0.25
C9orf78-203ENST00000461539 QRICH2Q9H0J4 1663 aa13.48□□□□□ -0.25
C9orf78-203ENST00000461539 ANKARQ7Z5J8 1434 aa13.47□□□□□ -0.25
C9orf78-203ENST00000461539 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.47□□□□□ -0.25
C9orf78-203ENST00000461539 ADGRB2O60241 1585 aa13.47□□□□□ -0.25
C9orf78-203ENST00000461539 PMFBP1Q8TBY8 1022 aa13.47□□□□□ -0.25
C9orf78-203ENST00000461539 CERKQ8TCT0 537 aa13.47□□□□□ -0.25
C9orf78-203ENST00000461539 PANK3Q9H999 370 aa13.47□□□□□ -0.25
C9orf78-203ENST00000461539 STRCP1A6NGW2 1772 aa13.46□□□□□ -0.25
C9orf78-203ENST00000461539 HDGFL2Q7Z4V5 671 aaPredicted RBP13.46□□□□□ -0.25
C9orf78-203ENST00000461539 NGDNQ8NEJ9 315 aaKnown RBP13.46□□□□□ -0.25
C9orf78-203ENST00000461539 ORAI2Q96SN7 254 aa13.46□□□□□ -0.25
C9orf78-203ENST00000461539 TERF2IPQ9NYB0 399 aa13.46□□□□□ -0.25
C9orf78-203ENST00000461539 SLAIN2Q9P270 581 aa13.46□□□□□ -0.25
C9orf78-203ENST00000461539 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
C9orf78-203ENST00000461539 PPIP5K1Q6PFW1 1433 aa13.46□□□□□ -0.26
C9orf78-203ENST00000461539 NINLQ9Y2I6 1382 aa13.45□□□□□ -0.26
C9orf78-203ENST00000461539 CDC42BPGQ6DT37 1551 aa13.45□□□□□ -0.26
C9orf78-203ENST00000461539 ATP7BP35670 1465 aa13.45□□□□□ -0.26
C9orf78-203ENST00000461539 C1orf167Q5SNV9 1468 aa13.45□□□□□ -0.26
C9orf78-203ENST00000461539 PLEKHG3A1L390 1219 aa13.45□□□□□ -0.26
C9orf78-203ENST00000461539 MST1RQ04912 1400 aa13.44□□□□□ -0.26
C9orf78-203ENST00000461539 ACEP12821 1306 aa13.43□□□□□ -0.26
C9orf78-203ENST00000461539 UBAP1LF5GYI3 381 aa13.43□□□□□ -0.26
C9orf78-203ENST00000461539 TOM1O60784 492 aa13.43□□□□□ -0.26
C9orf78-203ENST00000461539 BRINP3Q76B58 766 aa13.42□□□□□ -0.26
C9orf78-203ENST00000461539 ZNF692Q9BU19 519 aaPredicted RBP13.42□□□□□ -0.26
C9orf78-203ENST00000461539 ANKRD36BQ8N2N9 1353 aa13.42□□□□□ -0.26
C9orf78-203ENST00000461539 FOXO3O43524 673 aa13.41□□□□□ -0.26
C9orf78-203ENST00000461539 CARD14Q9BXL6 1004 aa13.41□□□□□ -0.26
C9orf78-203ENST00000461539 KNSTRNQ9Y448 316 aa13.41□□□□□ -0.26
C9orf78-203ENST00000461539 NALCNQ8IZF0 1738 aa13.41□□□□□ -0.26
C9orf78-203ENST00000461539 SCAF1Q9H7N4 1312 aaKnown RBP13.4□□□□□ -0.26
C9orf78-203ENST00000461539 PIP4K2BP78356 416 aa13.4□□□□□ -0.26
C9orf78-203ENST00000461539 PSME1Q06323 249 aa13.4□□□□□ -0.26
C9orf78-203ENST00000461539 A0A1W2PP64 1363 aa13.4□□□□□ -0.26
C9orf78-203ENST00000461539 XPCQ01831 940 aaPredicted RBP13.39□□□□□ -0.27
C9orf78-203ENST00000461539 CNGB1Q14028 1251 aaPredicted RBP13.39□□□□□ -0.27
C9orf78-203ENST00000461539 KTN1Q86UP2 1357 aaKnown RBP13.39□□□□□ -0.27
C9orf78-203ENST00000461539 POLR3AO14802 1390 aaPredicted RBP13.38□□□□□ -0.27
C9orf78-203ENST00000461539 DIEXFQ68CQ4 756 aaKnown RBP13.38□□□□□ -0.27
C9orf78-203ENST00000461539 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.38□□□□□ -0.27
C9orf78-203ENST00000461539 DDX17Q92841 729 aaKnown RBP13.38□□□□□ -0.27
C9orf78-203ENST00000461539 CPSF1Q10570 1443 aaKnown RBP13.38□□□□□ -0.27
C9orf78-203ENST00000461539 NPHP3Q7Z494 1330 aa13.38□□□□□ -0.27
C9orf78-203ENST00000461539 IQSEC2Q5JU85 1478 aa13.37□□□□□ -0.27
C9orf78-203ENST00000461539 PER1O15534 1290 aaPredicted RBP13.37□□□□□ -0.27
C9orf78-203ENST00000461539 PAK3O75914 559 aaPredicted RBP13.37□□□□□ -0.27
C9orf78-203ENST00000461539 KRT28Q7Z3Y7 464 aa13.37□□□□□ -0.27
C9orf78-203ENST00000461539 NSD3Q9BZ95 1437 aa13.37□□□□□ -0.27
C9orf78-203ENST00000461539 CD163L1Q9NR16 1453 aa13.36□□□□□ -0.27
C9orf78-203ENST00000461539 CGNL1Q0VF96 1302 aa13.36□□□□□ -0.27
C9orf78-203ENST00000461539 TTC21BQ7Z4L5 1316 aa13.36□□□□□ -0.27
C9orf78-203ENST00000461539 FMN2Q9NZ56 1722 aa13.36□□□□□ -0.27
C9orf78-203ENST00000461539 USP6P35125 1406 aa13.35□□□□□ -0.27
C9orf78-203ENST00000461539 CC2D1BQ5T0F9 858 aaKnown RBP13.34□□□□□ -0.27
C9orf78-203ENST00000461539 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
C9orf78-203ENST00000461539 USP32Q8NFA0 1604 aa13.34□□□□□ -0.27
C9orf78-203ENST00000461539 EDC4Q6P2E9 1401 aaKnown RBP13.33□□□□□ -0.28
C9orf78-203ENST00000461539 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
C9orf78-203ENST00000461539 NME9Q86XW9 330 aa13.33□□□□□ -0.28
C9orf78-203ENST00000461539 ANP32CO43423 234 aa13.32□□□□□ -0.28
C9orf78-203ENST00000461539 GGNBP2Q9H3C7 697 aa13.32□□□□□ -0.28
C9orf78-203ENST00000461539 TTC21AQ8NDW8 1320 aa13.32□□□□□ -0.28
C9orf78-203ENST00000461539 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms