RNA–Protein interactions for RNA: ENST00000461434.1

PSMD4-207, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 2

Gene PSMD4, Length 801 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-207ENST00000461434 DDX17Q92841 729 aaKnown RBP16■□□□□ 0.15
PSMD4-207ENST00000461434 STK26Q9P289 416 aa16■□□□□ 0.15
PSMD4-207ENST00000461434 PTCH1Q13635 1447 aa15.99■□□□□ 0.15
PSMD4-207ENST00000461434 SPATA31E1Q6ZUB1 1445 aa15.99■□□□□ 0.15
PSMD4-207ENST00000461434 NUTM2BA6NNL0 878 aaPredicted RBP15.98■□□□□ 0.15
PSMD4-207ENST00000461434 NUTM2EB1AL46 878 aaPredicted RBP15.98■□□□□ 0.15
PSMD4-207ENST00000461434 POTEAQ6S8J7 498 aa15.98■□□□□ 0.15
PSMD4-207ENST00000461434 NUTM2AQ8IVF1 878 aaPredicted RBP15.98■□□□□ 0.15
PSMD4-207ENST00000461434 IFT172Q9UG01 1749 aa15.97■□□□□ 0.15
PSMD4-207ENST00000461434 LRP6O75581 1613 aa15.97■□□□□ 0.15
PSMD4-207ENST00000461434 ANKRD30BQ9BXX2 1392 aa15.96■□□□□ 0.15
PSMD4-207ENST00000461434 SHPRHQ149N8 1683 aa15.95■□□□□ 0.14
PSMD4-207ENST00000461434 NHSL1Q5SYE7 1610 aa15.95■□□□□ 0.14
PSMD4-207ENST00000461434 TMEM132EQ6IEE7 984 aa15.95■□□□□ 0.14
PSMD4-207ENST00000461434 C1orf167Q5SNV9 1468 aa15.95■□□□□ 0.14
PSMD4-207ENST00000461434 SPATA31A6Q5VVP1 1343 aa15.94■□□□□ 0.14
PSMD4-207ENST00000461434 ORAI2Q96SN7 254 aa15.93■□□□□ 0.14
PSMD4-207ENST00000461434 NUTM2FA1L443 756 aa15.92■□□□□ 0.14
PSMD4-207ENST00000461434 WAPLQ7Z5K2 1190 aa15.92■□□□□ 0.14
PSMD4-207ENST00000461434 PIK3C2GO75747 1445 aa15.92■□□□□ 0.14
PSMD4-207ENST00000461434 ACIN1Q9UKV3 1341 aaKnown RBP15.92■□□□□ 0.14
PSMD4-207ENST00000461434 SPDYE4A6NLX3 237 aa15.91■□□□□ 0.14
PSMD4-207ENST00000461434 MKRN4PQ13434 485 aaPredicted RBP15.91■□□□□ 0.14
PSMD4-207ENST00000461434 LRPPRCP42704 1394 aaKnown RBP15.9■□□□□ 0.14
PSMD4-207ENST00000461434 PLEKHH1Q9ULM0 1364 aa15.9■□□□□ 0.14
PSMD4-207ENST00000461434 PRAG1Q86YV5 1406 aa15.89■□□□□ 0.13
PSMD4-207ENST00000461434 LRRC59Q96AG4 307 aaKnown RBP15.89■□□□□ 0.13
PSMD4-207ENST00000461434 ESCO1Q5FWF5 840 aa15.88■□□□□ 0.13
PSMD4-207ENST00000461434 CFAP70Q5T0N1 1121 aa15.88■□□□□ 0.13
PSMD4-207ENST00000461434 KNDC1Q76NI1 1749 aa15.88■□□□□ 0.13
PSMD4-207ENST00000461434 YTHDC2Q9H6S0 1430 aaKnown RBP15.87■□□□□ 0.13
PSMD4-207ENST00000461434 SAFB2Q14151 953 aaKnown RBP eCLIP15.87■□□□□ 0.13
PSMD4-207ENST00000461434 KDM2AQ9Y2K7 1162 aa15.87■□□□□ 0.13
PSMD4-207ENST00000461434 CDC42BPGQ6DT37 1551 aa15.87■□□□□ 0.13
PSMD4-207ENST00000461434 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
PSMD4-207ENST00000461434 XPCQ01831 940 aaPredicted RBP15.86■□□□□ 0.13
PSMD4-207ENST00000461434 C8orf37Q96NL8 207 aa15.86■□□□□ 0.13
PSMD4-207ENST00000461434 FBXO3Q9UK99 471 aa15.86■□□□□ 0.13
PSMD4-207ENST00000461434 TECPR2O15040 1411 aa15.85■□□□□ 0.13
PSMD4-207ENST00000461434 MYOM2P54296 1465 aa15.85■□□□□ 0.13
PSMD4-207ENST00000461434 ZNF772Q68DY9 489 aaPredicted RBP15.85■□□□□ 0.13
PSMD4-207ENST00000461434 ABCC11Q96J66 1382 aa15.85■□□□□ 0.13
PSMD4-207ENST00000461434 ADAMTS2O95450 1211 aa15.84■□□□□ 0.13
PSMD4-207ENST00000461434 C14orf93Q9H972 538 aaKnown RBP15.84■□□□□ 0.13
PSMD4-207ENST00000461434 AFF2P51816 1311 aa15.84■□□□□ 0.13
PSMD4-207ENST00000461434 DHX57Q6P158 1386 aaKnown RBP15.83■□□□□ 0.12
PSMD4-207ENST00000461434 NRXN1Q9ULB1 1477 aa15.83■□□□□ 0.12
PSMD4-207ENST00000461434 LAMC1P11047 1609 aa15.83■□□□□ 0.12
PSMD4-207ENST00000461434 DCAF11Q8TEB1 546 aa15.82■□□□□ 0.12
PSMD4-207ENST00000461434 SOS2Q07890 1332 aaPredicted RBP15.82■□□□□ 0.12
PSMD4-207ENST00000461434 FOXO3O43524 673 aa15.81■□□□□ 0.12
PSMD4-207ENST00000461434 PRAM1Q96QH2 718 aa15.81■□□□□ 0.12
PSMD4-207ENST00000461434 FMN2Q9NZ56 1722 aa15.8■□□□□ 0.12
PSMD4-207ENST00000461434 NPHP3Q7Z494 1330 aa15.8■□□□□ 0.12
PSMD4-207ENST00000461434 POGKQ9P215 609 aa15.8■□□□□ 0.12
PSMD4-207ENST00000461434 PLEKHG5O94827 1062 aa15.79■□□□□ 0.12
PSMD4-207ENST00000461434 PROM2Q8N271 834 aa15.79■□□□□ 0.12
PSMD4-207ENST00000461434 TRAK1Q9UPV9 953 aa15.79■□□□□ 0.12
PSMD4-207ENST00000461434 RGPD8O14715 1765 aaPredicted RBP15.78■□□□□ 0.12
PSMD4-207ENST00000461434 RXRBP28702 533 aa15.78■□□□□ 0.12
PSMD4-207ENST00000461434 NGLY1Q96IV0 654 aa15.78■□□□□ 0.12
PSMD4-207ENST00000461434 PXDNQ92626 1479 aa15.77■□□□□ 0.11
PSMD4-207ENST00000461434 HRCP23327 699 aa15.76■□□□□ 0.11
PSMD4-207ENST00000461434 HIRIP3Q9BW71 556 aaPredicted RBP15.76■□□□□ 0.11
PSMD4-207ENST00000461434 ADGRB1O14514 1584 aa15.75■□□□□ 0.11
PSMD4-207ENST00000461434 MINK1Q8N4C8 1332 aaPredicted RBP15.74■□□□□ 0.11
PSMD4-207ENST00000461434 KIF1AQ12756 1690 aa15.74■□□□□ 0.11
PSMD4-207ENST00000461434 SIRT1Q96EB6 747 aa15.74■□□□□ 0.11
PSMD4-207ENST00000461434 QTRT2Q9H974 415 aaKnown RBP15.74■□□□□ 0.11
PSMD4-207ENST00000461434 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
PSMD4-207ENST00000461434 DLC1Q96QB1 1528 aa15.73■□□□□ 0.11
PSMD4-207ENST00000461434 COL22A1Q8NFW1 1626 aaPredicted RBP15.73■□□□□ 0.11
PSMD4-207ENST00000461434 PHF8Q9UPP1 1060 aa15.73■□□□□ 0.11
PSMD4-207ENST00000461434 LMOD2Q6P5Q4 547 aa15.72■□□□□ 0.11
PSMD4-207ENST00000461434 KRT28Q7Z3Y7 464 aa15.72■□□□□ 0.11
PSMD4-207ENST00000461434 PMFBP1Q8TBY8 1022 aa15.72■□□□□ 0.11
PSMD4-207ENST00000461434 USP21Q9UK80 565 aa15.72■□□□□ 0.11
PSMD4-207ENST00000461434 RBM6P78332 1123 aaKnown RBP15.7■□□□□ 0.1
PSMD4-207ENST00000461434 RGS12O14924 1447 aa15.69■□□□□ 0.1
PSMD4-207ENST00000461434 HAP1P54257 671 aaPredicted RBP15.69■□□□□ 0.1
PSMD4-207ENST00000461434 SPATA31A3Q5VYP0 1347 aa15.68■□□□□ 0.1
PSMD4-207ENST00000461434 USP32Q8NFA0 1604 aa15.68■□□□□ 0.1
PSMD4-207ENST00000461434 VASPP50552 380 aaPredicted RBP15.68■□□□□ 0.1
PSMD4-207ENST00000461434 PSME1Q06323 249 aa15.68■□□□□ 0.1
PSMD4-207ENST00000461434 POLA2Q14181 598 aa15.68■□□□□ 0.1
PSMD4-207ENST00000461434 MARF1Q9Y4F3 1742 aaKnown RBP15.68■□□□□ 0.1
PSMD4-207ENST00000461434 ADGRB2O60241 1585 aa15.67■□□□□ 0.1
PSMD4-207ENST00000461434 CABLES1Q8TDN4 633 aa15.67■□□□□ 0.1
PSMD4-207ENST00000461434 TRPC5Q9UL62 973 aaPredicted RBP15.67■□□□□ 0.1
PSMD4-207ENST00000461434 ARHGEF28Q8N1W1 1705 aaKnown RBP15.67■□□□□ 0.1
PSMD4-207ENST00000461434 TNS3Q68CZ2 1445 aa15.67■□□□□ 0.1
PSMD4-207ENST00000461434 CDK12Q9NYV4 1490 aaPredicted RBP15.66■□□□□ 0.1
PSMD4-207ENST00000461434 UPF1Q92900 1129 aaKnown RBP eCLIP15.66■□□□□ 0.1
PSMD4-207ENST00000461434 ANKARQ7Z5J8 1434 aa15.66■□□□□ 0.1
PSMD4-207ENST00000461434 FNBP4Q8N3X1 1017 aaPredicted RBP15.65■□□□□ 0.1
PSMD4-207ENST00000461434 STAC3Q96MF2 364 aa15.65■□□□□ 0.1
PSMD4-207ENST00000461434 PRR36Q9H6K5 1346 aa15.65■□□□□ 0.1
PSMD4-207ENST00000461434 WASLO00401 505 aaPredicted RBP15.64■□□□□ 0.09
PSMD4-207ENST00000461434 TULP4Q9NRJ4 1543 aa15.63■□□□□ 0.09
PSMD4-207ENST00000461434 ATRNO75882 1429 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms