RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 POGKQ9P215 609 aa16.01■□□□□ 0.15
SSBP1-202ENST00000461433 C19orf44Q9H6X5 657 aa16■□□□□ 0.15
SSBP1-202ENST00000461433 QRICH2Q9H0J4 1663 aa15.99■□□□□ 0.15
SSBP1-202ENST00000461433 C14orf37Q86TY3 774 aa15.99■□□□□ 0.15
SSBP1-202ENST00000461433 CENPJQ9HC77 1338 aaPredicted RBP15.98■□□□□ 0.15
SSBP1-202ENST00000461433 MSH6P52701 1360 aa15.98■□□□□ 0.15
SSBP1-202ENST00000461433 ADGRB2O60241 1585 aa15.97■□□□□ 0.15
SSBP1-202ENST00000461433 DCCP43146 1447 aa15.97■□□□□ 0.15
SSBP1-202ENST00000461433 EIF3AQ14152 1382 aaKnown RBP15.97■□□□□ 0.15
SSBP1-202ENST00000461433 USP47Q96K76 1375 aa15.97■□□□□ 0.15
SSBP1-202ENST00000461433 CDC42BPGQ6DT37 1551 aa15.97■□□□□ 0.15
SSBP1-202ENST00000461433 MINK1Q8N4C8 1332 aaPredicted RBP15.96■□□□□ 0.15
SSBP1-202ENST00000461433 HIRIP3Q9BW71 556 aaPredicted RBP15.95■□□□□ 0.14
SSBP1-202ENST00000461433 ST20-MTHFSA0A0A6YYL1 179 aa15.95■□□□□ 0.14
SSBP1-202ENST00000461433 FBXO41Q8TF61 875 aa15.94■□□□□ 0.14
SSBP1-202ENST00000461433 FMN2Q9NZ56 1722 aa15.94■□□□□ 0.14
SSBP1-202ENST00000461433 ATF3P18847 181 aa15.93■□□□□ 0.14
SSBP1-202ENST00000461433 ZEB1P37275 1124 aaPredicted RBP15.93■□□□□ 0.14
SSBP1-202ENST00000461433 CADPS2Q86UW7 1296 aa15.93■□□□□ 0.14
SSBP1-202ENST00000461433 TESK2Q96S53 571 aa15.93■□□□□ 0.14
SSBP1-202ENST00000461433 SBNO2Q9Y2G9 1366 aa15.93■□□□□ 0.14
SSBP1-202ENST00000461433 MST1RQ04912 1400 aa15.92■□□□□ 0.14
SSBP1-202ENST00000461433 WASLO00401 505 aaPredicted RBP15.92■□□□□ 0.14
SSBP1-202ENST00000461433 TULP4Q9NRJ4 1543 aa15.92■□□□□ 0.14
SSBP1-202ENST00000461433 RGPD8O14715 1765 aaPredicted RBP15.91■□□□□ 0.14
SSBP1-202ENST00000461433 UBAP1LF5GYI3 381 aa15.91■□□□□ 0.14
SSBP1-202ENST00000461433 TOM1O60784 492 aa15.91■□□□□ 0.14
SSBP1-202ENST00000461433 SLAIN2Q9P270 581 aa15.91■□□□□ 0.14
SSBP1-202ENST00000461433 USP32Q8NFA0 1604 aa15.9■□□□□ 0.14
SSBP1-202ENST00000461433 HSPA5P11021 654 aaKnown RBP15.89■□□□□ 0.13
SSBP1-202ENST00000461433 EIF4G2P78344 907 aaKnown RBP eCLIP15.89■□□□□ 0.13
SSBP1-202ENST00000461433 CDK19Q9BWU1 502 aa15.89■□□□□ 0.13
SSBP1-202ENST00000461433 C1orf167Q5SNV9 1468 aa15.89■□□□□ 0.13
SSBP1-202ENST00000461433 NUTM2FA1L443 756 aa15.88■□□□□ 0.13
SSBP1-202ENST00000461433 PRR36Q9H6K5 1346 aa15.87■□□□□ 0.13
SSBP1-202ENST00000461433 ROBO1Q9Y6N7 1651 aa15.86■□□□□ 0.13
SSBP1-202ENST00000461433 EVC2Q86UK5 1308 aa15.86■□□□□ 0.13
SSBP1-202ENST00000461433 ANKARQ7Z5J8 1434 aa15.86■□□□□ 0.13
SSBP1-202ENST00000461433 ATP7BP35670 1465 aa15.85■□□□□ 0.13
SSBP1-202ENST00000461433 PIP4K2BP78356 416 aa15.85■□□□□ 0.13
SSBP1-202ENST00000461433 ORAI2Q96SN7 254 aa15.85■□□□□ 0.13
SSBP1-202ENST00000461433 CABP2Q9NPB3 220 aa15.85■□□□□ 0.13
SSBP1-202ENST00000461433 BRINP3Q76B58 766 aa15.84■□□□□ 0.13
SSBP1-202ENST00000461433 NUDT16Q96DE0 195 aaKnown RBP15.84■□□□□ 0.13
SSBP1-202ENST00000461433 DISP3Q9P2K9 1392 aa15.84■□□□□ 0.13
SSBP1-202ENST00000461433 TOPAZ1Q8N9V7 1692 aa15.84■□□□□ 0.13
SSBP1-202ENST00000461433 SRPK2P78362 688 aaKnown RBP15.83■□□□□ 0.12
SSBP1-202ENST00000461433 SLC24A1O60721 1099 aa15.82■□□□□ 0.12
SSBP1-202ENST00000461433 ESCO1Q5FWF5 840 aa15.82■□□□□ 0.12
SSBP1-202ENST00000461433 ITSN1Q15811 1721 aa15.82■□□□□ 0.12
SSBP1-202ENST00000461433 TMF1P82094 1093 aa15.81■□□□□ 0.12
SSBP1-202ENST00000461433 PUS7Q96PZ0 661 aaKnown RBP15.8■□□□□ 0.12
SSBP1-202ENST00000461433 SCAF1Q9H7N4 1312 aaKnown RBP15.8■□□□□ 0.12
SSBP1-202ENST00000461433 C11orf95C9JLR9 678 aaPredicted RBP15.79■□□□□ 0.12
SSBP1-202ENST00000461433 CCDC61Q9Y6R9 512 aa15.79■□□□□ 0.12
SSBP1-202ENST00000461433 NHSL1Q5SYE7 1610 aa15.79■□□□□ 0.12
SSBP1-202ENST00000461433 KIF1AQ12756 1690 aa15.79■□□□□ 0.12
SSBP1-202ENST00000461433 PHF8Q9UPP1 1060 aa15.79■□□□□ 0.12
SSBP1-202ENST00000461433 DDX17Q92841 729 aaKnown RBP15.78■□□□□ 0.12
SSBP1-202ENST00000461433 PPIP5K1Q6PFW1 1433 aa15.77■□□□□ 0.12
SSBP1-202ENST00000461433 AHDC1Q5TGY3 1603 aaPredicted RBP15.77■□□□□ 0.12
SSBP1-202ENST00000461433 PLEKHG3A1L390 1219 aa15.77■□□□□ 0.12
SSBP1-202ENST00000461433 PMFBP1Q8TBY8 1022 aa15.77■□□□□ 0.12
SSBP1-202ENST00000461433 ATAD2Q6PL18 1390 aa15.77■□□□□ 0.11
SSBP1-202ENST00000461433 CABP1Q9NZU7 370 aa15.76■□□□□ 0.11
SSBP1-202ENST00000461433 FOXO3O43524 673 aa15.76■□□□□ 0.11
SSBP1-202ENST00000461433 PHLPP1O60346 1717 aa15.75■□□□□ 0.11
SSBP1-202ENST00000461433 POLR3AO14802 1390 aaPredicted RBP15.75■□□□□ 0.11
SSBP1-202ENST00000461433 MYOM1P52179 1685 aa15.74■□□□□ 0.11
SSBP1-202ENST00000461433 CDCA8Q53HL2 280 aa15.74■□□□□ 0.11
SSBP1-202ENST00000461433 PXDNQ92626 1479 aa15.74■□□□□ 0.11
SSBP1-202ENST00000461433 COL16A1Q07092 1604 aaPredicted RBP15.74■□□□□ 0.11
SSBP1-202ENST00000461433 HSPA1LP34931 641 aa15.73■□□□□ 0.11
SSBP1-202ENST00000461433 SLC12A5Q9H2X9 1139 aa15.73■□□□□ 0.11
SSBP1-202ENST00000461433 ACEP12821 1306 aa15.73■□□□□ 0.11
SSBP1-202ENST00000461433 SOS2Q07890 1332 aaPredicted RBP15.73■□□□□ 0.11
SSBP1-202ENST00000461433 CD163L1Q9NR16 1453 aa15.73■□□□□ 0.11
SSBP1-202ENST00000461433 AKAP12Q02952 1782 aa15.73■□□□□ 0.11
SSBP1-202ENST00000461433 KIF7Q2M1P5 1343 aa15.72■□□□□ 0.11
SSBP1-202ENST00000461433 NPHP3Q7Z494 1330 aa15.72■□□□□ 0.11
SSBP1-202ENST00000461433 CPSF1Q10570 1443 aaKnown RBP15.71■□□□□ 0.11
SSBP1-202ENST00000461433 XPCQ01831 940 aaPredicted RBP15.71■□□□□ 0.11
SSBP1-202ENST00000461433 NGDNQ8NEJ9 315 aaKnown RBP15.71■□□□□ 0.11
SSBP1-202ENST00000461433 TRPM3Q9HCF6 1732 aaPredicted RBP15.71■□□□□ 0.11
SSBP1-202ENST00000461433 KRT28Q7Z3Y7 464 aa15.7■□□□□ 0.1
SSBP1-202ENST00000461433 TMC1Q8TDI8 760 aa15.7■□□□□ 0.1
SSBP1-202ENST00000461433 NINLQ9Y2I6 1382 aa15.7■□□□□ 0.1
SSBP1-202ENST00000461433 WASHC2AQ641Q2 1341 aa15.7■□□□□ 0.1
SSBP1-202ENST00000461433 PSME1Q06323 249 aa15.7■□□□□ 0.1
SSBP1-202ENST00000461433 MON2Q7Z3U7 1717 aa15.69■□□□□ 0.1
SSBP1-202ENST00000461433 CCDC7Q96M83 1385 aa15.68■□□□□ 0.1
SSBP1-202ENST00000461433 POLR3GLQ9BT43 218 aa15.67■□□□□ 0.1
SSBP1-202ENST00000461433 USP6P35125 1406 aa15.67■□□□□ 0.1
SSBP1-202ENST00000461433 SSH2Q76I76 1423 aa15.67■□□□□ 0.1
SSBP1-202ENST00000461433 A0A1W2PP64 1363 aa15.67■□□□□ 0.1
SSBP1-202ENST00000461433 ZNF692Q9BU19 519 aaPredicted RBP15.67■□□□□ 0.1
SSBP1-202ENST00000461433 NRKQ7Z2Y5 1582 aa15.66■□□□□ 0.1
SSBP1-202ENST00000461433 SBNO1A3KN83 1393 aa15.66■□□□□ 0.1
SSBP1-202ENST00000461433 ALS2Q96Q42 1657 aa15.66■□□□□ 0.1
SSBP1-202ENST00000461433 ANKRD36BQ8N2N9 1353 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms