RNA–Protein interactions for RNA: ENST00000461289.2

CHL1-209, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 2

Gene CHL1, Length 462 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-209ENST00000461289 MTMR2Q13614 643 aa12.38□□□□□ -0.43
CHL1-209ENST00000461289 BANK1Q8NDB2 785 aa12.38□□□□□ -0.43
CHL1-209ENST00000461289 PUS10Q3MIT2 529 aaKnown RBP12.37□□□□□ -0.43
CHL1-209ENST00000461289 RTL5Q5HYW3 569 aaPredicted RBP12.37□□□□□ -0.43
CHL1-209ENST00000461289 TSC1Q92574 1164 aa12.37□□□□□ -0.43
CHL1-209ENST00000461289 PCDHGC3Q9UN70 934 aa12.37□□□□□ -0.43
CHL1-209ENST00000461289 KCTD12Q96CX2 325 aaKnown RBP12.36□□□□□ -0.43
CHL1-209ENST00000461289 SPDYE5A6NIY4 337 aa12.35□□□□□ -0.43
CHL1-209ENST00000461289 RAD21O60216 631 aa12.35□□□□□ -0.43
CHL1-209ENST00000461289 Q3C1V9 767 aa12.35□□□□□ -0.43
CHL1-209ENST00000461289 FBXO31Q5XUX0 539 aaPredicted RBP12.35□□□□□ -0.43
CHL1-209ENST00000461289 MORN1Q5T089 497 aa12.34□□□□□ -0.43
CHL1-209ENST00000461289 HELBQ8NG08 1087 aaPredicted RBP12.34□□□□□ -0.43
CHL1-209ENST00000461289 PCDHB3Q9Y5E6 796 aa12.34□□□□□ -0.43
CHL1-209ENST00000461289 APBB1O00213 710 aa12.33□□□□□ -0.44
CHL1-209ENST00000461289 SUPT5HO00267 1087 aaKnown RBP12.33□□□□□ -0.44
CHL1-209ENST00000461289 APLP1P51693 650 aa12.33□□□□□ -0.44
CHL1-209ENST00000461289 THSD4Q6ZMP0 1018 aa12.32□□□□□ -0.44
CHL1-209ENST00000461289 WBP1LQ9NX94 342 aa12.32□□□□□ -0.44
CHL1-209ENST00000461289 SLC27A5Q9Y2P5 690 aa12.32□□□□□ -0.44
CHL1-209ENST00000461289 NR1I2O75469 434 aa12.31□□□□□ -0.44
CHL1-209ENST00000461289 SNRKQ9NRH2 765 aa12.31□□□□□ -0.44
CHL1-209ENST00000461289 PRM3Q9NNZ6 103 aa12.3□□□□□ -0.44
CHL1-209ENST00000461289 USP17L8P0C7I0 530 aa12.29□□□□□ -0.44
CHL1-209ENST00000461289 SYMPKQ92797 1274 aaKnown RBP12.29□□□□□ -0.44
CHL1-209ENST00000461289 CLUAP1Q96AJ1 413 aa12.29□□□□□ -0.44
CHL1-209ENST00000461289 PRR7Q8TB68 274 aa12.28□□□□□ -0.44
CHL1-209ENST00000461289 RETREG3Q86VR2 466 aa12.27□□□□□ -0.45
CHL1-209ENST00000461289 RNF166Q96A37 237 aaPredicted RBP12.27□□□□□ -0.45
CHL1-209ENST00000461289 CFAP99D6REC4 459 aa12.25□□□□□ -0.45
CHL1-209ENST00000461289 PTPN5P54829 565 aa12.25□□□□□ -0.45
CHL1-209ENST00000461289 BLOC1S3Q6QNY0 202 aa12.25□□□□□ -0.45
CHL1-209ENST00000461289 NYAP1Q6ZVC0 841 aa12.25□□□□□ -0.45
CHL1-209ENST00000461289 A6NJR5 290 aa12.24□□□□□ -0.45
CHL1-209ENST00000461289 FMNL1O95466 1100 aaPredicted RBP12.24□□□□□ -0.45
CHL1-209ENST00000461289 SCUBE3Q8IX30 993 aa12.24□□□□□ -0.45
CHL1-209ENST00000461289 MTMR14Q8NCE2 650 aa12.24□□□□□ -0.45
CHL1-209ENST00000461289 COPS2P61201 443 aa12.23□□□□□ -0.45
CHL1-209ENST00000461289 CTDSPL2Q05D32 466 aa12.23□□□□□ -0.45
CHL1-209ENST00000461289 RNF19BQ6ZMZ0 732 aa12.23□□□□□ -0.45
CHL1-209ENST00000461289 WWC1Q8IX03 1113 aa12.23□□□□□ -0.45
CHL1-209ENST00000461289 USB1Q9BQ65 265 aaKnown RBP12.23□□□□□ -0.45
CHL1-209ENST00000461289 POM121Q96HA1 1249 aa12.22□□□□□ -0.45
CHL1-209ENST00000461289 PROSER2Q86WR7 435 aaPredicted RBP12.21□□□□□ -0.45
CHL1-209ENST00000461289 MYT1LQ9UL68 1186 aa12.21□□□□□ -0.45
CHL1-209ENST00000461289 COG6Q9Y2V7 657 aa12.2□□□□□ -0.46
CHL1-209ENST00000461289 SALL2Q9Y467 1007 aaPredicted RBP12.2□□□□□ -0.46
CHL1-209ENST00000461289 SOCS7O14512 581 aa12.19□□□□□ -0.46
CHL1-209ENST00000461289 BRICD5Q6PL45 260 aa12.19□□□□□ -0.46
CHL1-209ENST00000461289 GDPD2Q9HCC8 539 aa12.19□□□□□ -0.46
CHL1-209ENST00000461289 ABL2P42684 1182 aa12.18□□□□□ -0.46
CHL1-209ENST00000461289 LRRN4Q8WUT4 740 aa12.18□□□□□ -0.46
CHL1-209ENST00000461289 NDUFB9Q9Y6M9 179 aa12.17□□□□□ -0.46
CHL1-209ENST00000461289 TRAK2O60296 914 aa12.16□□□□□ -0.46
CHL1-209ENST00000461289 DESI1Q6ICB0 168 aa12.16□□□□□ -0.46
CHL1-209ENST00000461289 SPSB2Q99619 263 aa12.16□□□□□ -0.46
CHL1-209ENST00000461289 TBC1D2BQ9UPU7 963 aa12.15□□□□□ -0.46
CHL1-209ENST00000461289 THAP11Q96EK4 314 aa12.14□□□□□ -0.47
CHL1-209ENST00000461289 MTRQ99707 1265 aa12.14□□□□□ -0.47
CHL1-209ENST00000461289 HMX1Q9NP08 348 aaPredicted RBP12.14□□□□□ -0.47
CHL1-209ENST00000461289 ARID3CA6NKF2 412 aa12.13□□□□□ -0.47
CHL1-209ENST00000461289 PNMA1Q8ND90 353 aa12.13□□□□□ -0.47
CHL1-209ENST00000461289 PER1O15534 1290 aaPredicted RBP12.12□□□□□ -0.47
CHL1-209ENST00000461289 ZPR1O75312 459 aa12.12□□□□□ -0.47
CHL1-209ENST00000461289 JUNDP17535 347 aa12.12□□□□□ -0.47
CHL1-209ENST00000461289 ZNF330Q9Y3S2 320 aaPredicted RBP12.12□□□□□ -0.47
CHL1-209ENST00000461289 LYPD8Q6UX82 237 aa12.11□□□□□ -0.47
CHL1-209ENST00000461289 GJD4Q96KN9 370 aaPredicted RBP12.11□□□□□ -0.47
CHL1-209ENST00000461289 IL21Q9HBE4 155 aa12.11□□□□□ -0.47
CHL1-209ENST00000461289 TLL1O43897 1013 aa12.1□□□□□ -0.47
CHL1-209ENST00000461289 MSS51Q4VC12 460 aa12.1□□□□□ -0.47
CHL1-209ENST00000461289 ADH1BP00325 375 aa12.09□□□□□ -0.47
CHL1-209ENST00000461289 NR6A1Q15406 480 aa12.09□□□□□ -0.47
CHL1-209ENST00000461289 TRIM34Q9BYJ4 488 aa12.09□□□□□ -0.47
CHL1-209ENST00000461289 ZNF777Q9ULD5 760 aaPredicted RBP12.09□□□□□ -0.47
CHL1-209ENST00000461289 CTHP32929 405 aa12.08□□□□□ -0.48
CHL1-209ENST00000461289 PTPRNQ16849 979 aa12.08□□□□□ -0.48
CHL1-209ENST00000461289 ARID3AQ99856 593 aa12.08□□□□□ -0.48
CHL1-209ENST00000461289 FNBP4Q8N3X1 1017 aaPredicted RBP12.07□□□□□ -0.48
CHL1-209ENST00000461289 HCSTQ9UBK5 93 aa12.07□□□□□ -0.48
CHL1-209ENST00000461289 FAM160A2Q8N612 972 aaPredicted RBP12.06□□□□□ -0.48
CHL1-209ENST00000461289 TJAP1Q5JTD0 557 aa12.05□□□□□ -0.48
CHL1-209ENST00000461289 EPS8L1Q8TE68 723 aa12.05□□□□□ -0.48
CHL1-209ENST00000461289 ZNF516Q92618 1163 aa12.05□□□□□ -0.48
CHL1-209ENST00000461289 PRDM9Q9NQV7 894 aa12.05□□□□□ -0.48
CHL1-209ENST00000461289 DXOO77932 396 aaKnown RBP12.04□□□□□ -0.48
CHL1-209ENST00000461289 CCNYL3P0C7X3 344 aa12.04□□□□□ -0.48
CHL1-209ENST00000461289 NUDT12Q9BQG2 462 aa12.04□□□□□ -0.48
CHL1-209ENST00000461289 SLC6A16Q9GZN6 736 aa12.04□□□□□ -0.48
CHL1-209ENST00000461289 WASHC4Q2M389 1173 aa12.03□□□□□ -0.48
CHL1-209ENST00000461289 MMP16P51512 607 aa12.02□□□□□ -0.49
CHL1-209ENST00000461289 CCDC24Q8N4L8 307 aa12.01□□□□□ -0.49
CHL1-209ENST00000461289 CCDC97Q96F63 343 aaPredicted RBP12.01□□□□□ -0.49
CHL1-209ENST00000461289 C1orf115Q9H7X2 142 aa12.01□□□□□ -0.49
CHL1-209ENST00000461289 MAP10Q9P2G4 905 aa12.01□□□□□ -0.49
CHL1-209ENST00000461289 F12P00748 615 aaPredicted RBP11.98□□□□□ -0.49
CHL1-209ENST00000461289 IRF5Q13568 498 aa11.98□□□□□ -0.49
CHL1-209ENST00000461289 CCDC82Q8N4S0 544 aa11.98□□□□□ -0.49
CHL1-209ENST00000461289 ARMC2Q8NEN0 867 aa11.98□□□□□ -0.49
CHL1-209ENST00000461289 CALR3Q96L12 384 aaKnown RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms