RNA–Protein interactions for RNA: ENST00000461239.2

ECHDC1-212, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-212ENST00000461239 RCCD1A6NED2 376 aa12.94□□□□□ -0.34
ECHDC1-212ENST00000461239 PTPREP23469 700 aa12.93□□□□□ -0.34
ECHDC1-212ENST00000461239 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.93□□□□□ -0.34
ECHDC1-212ENST00000461239 POLR3EQ9NVU0 708 aa12.93□□□□□ -0.34
ECHDC1-212ENST00000461239 ABCA8O94911 1581 aa12.93□□□□□ -0.34
ECHDC1-212ENST00000461239 EFCAB5A4FU69 1503 aa12.92□□□□□ -0.34
ECHDC1-212ENST00000461239 ABCC2Q92887 1545 aa12.92□□□□□ -0.34
ECHDC1-212ENST00000461239 MCM6Q14566 821 aa12.91□□□□□ -0.34
ECHDC1-212ENST00000461239 TBC1D2Q9BYX2 928 aa12.91□□□□□ -0.34
ECHDC1-212ENST00000461239 SNPHO15079 494 aa12.9□□□□□ -0.34
ECHDC1-212ENST00000461239 TRIM6-TRIM34B2RNG4 842 aa12.89□□□□□ -0.35
ECHDC1-212ENST00000461239 CLK2P49760 499 aaKnown RBP12.89□□□□□ -0.35
ECHDC1-212ENST00000461239 NUDT18Q6ZVK8 323 aa12.89□□□□□ -0.35
ECHDC1-212ENST00000461239 MARVELD3Q96A59 401 aa12.89□□□□□ -0.35
ECHDC1-212ENST00000461239 KDM5BQ9UGL1 1544 aa12.88□□□□□ -0.35
ECHDC1-212ENST00000461239 CD46P15529 392 aa12.88□□□□□ -0.35
ECHDC1-212ENST00000461239 NBPF26B4DH59 902 aa12.87□□□□□ -0.35
ECHDC1-212ENST00000461239 DIXDC1Q155Q3 683 aa12.87□□□□□ -0.35
ECHDC1-212ENST00000461239 TATDN2Q93075 761 aa12.87□□□□□ -0.35
ECHDC1-212ENST00000461239 C1orf115Q9H7X2 142 aa12.87□□□□□ -0.35
ECHDC1-212ENST00000461239 DNAJB2P25686 324 aa12.86□□□□□ -0.35
ECHDC1-212ENST00000461239 PNMA3Q9UL41 463 aa12.86□□□□□ -0.35
ECHDC1-212ENST00000461239 MAPKBP1O60336 1514 aa12.86□□□□□ -0.35
ECHDC1-212ENST00000461239 SPIRE2Q8WWL2 714 aa12.85□□□□□ -0.35
ECHDC1-212ENST00000461239 TMEM134Q9H6X4 195 aa12.85□□□□□ -0.35
ECHDC1-212ENST00000461239 CLIP1P30622 1438 aa12.85□□□□□ -0.35
ECHDC1-212ENST00000461239 A6NJR5 290 aa12.84□□□□□ -0.35
ECHDC1-212ENST00000461239 PROX2Q3B8N5 592 aa12.84□□□□□ -0.35
ECHDC1-212ENST00000461239 CLUAP1Q96AJ1 413 aa12.84□□□□□ -0.35
ECHDC1-212ENST00000461239 LIMD1Q9UGP4 676 aa12.84□□□□□ -0.35
ECHDC1-212ENST00000461239 ATP10BO94823 1461 aa12.84□□□□□ -0.35
ECHDC1-212ENST00000461239 NUP153P49790 1475 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-212ENST00000461239 ZCCHC11Q5TAX3 1644 aaKnown RBP12.84□□□□□ -0.35
ECHDC1-212ENST00000461239 RAPGEF6Q8TEU7 1601 aa12.84□□□□□ -0.35
ECHDC1-212ENST00000461239 CEP162Q5TB80 1403 aa12.83□□□□□ -0.36
ECHDC1-212ENST00000461239 ASXL2Q76L83 1435 aa12.83□□□□□ -0.36
ECHDC1-212ENST00000461239 ARID3CA6NKF2 412 aa12.83□□□□□ -0.36
ECHDC1-212ENST00000461239 FBXO31Q5XUX0 539 aaPredicted RBP12.83□□□□□ -0.36
ECHDC1-212ENST00000461239 PACS2Q86VP3 889 aa12.83□□□□□ -0.36
ECHDC1-212ENST00000461239 SULF1Q8IWU6 871 aa12.83□□□□□ -0.36
ECHDC1-212ENST00000461239 KCNK17Q96T54 332 aa12.82□□□□□ -0.36
ECHDC1-212ENST00000461239 ATP1B4Q9UN42 357 aaPredicted RBP12.82□□□□□ -0.36
ECHDC1-212ENST00000461239 ABCC10Q5T3U5 1492 aa12.81□□□□□ -0.36
ECHDC1-212ENST00000461239 DDX11L8A8MPP1 907 aa12.81□□□□□ -0.36
ECHDC1-212ENST00000461239 SMAPO00193 183 aa12.8□□□□□ -0.36
ECHDC1-212ENST00000461239 FMN1Q68DA7 1419 aa12.79□□□□□ -0.36
ECHDC1-212ENST00000461239 RFC5P40937 340 aa12.79□□□□□ -0.36
ECHDC1-212ENST00000461239 PPP2R2DQ66LE6 453 aa12.79□□□□□ -0.36
ECHDC1-212ENST00000461239 RIC3Q7Z5B4 369 aa12.79□□□□□ -0.36
ECHDC1-212ENST00000461239 DIP2BQ9P265 1576 aa12.78□□□□□ -0.36
ECHDC1-212ENST00000461239 TUSC1Q2TAM9 212 aa12.78□□□□□ -0.36
ECHDC1-212ENST00000461239 ZBED2Q9BTP6 218 aa12.78□□□□□ -0.36
ECHDC1-212ENST00000461239 KIF13AQ9H1H9 1805 aa12.78□□□□□ -0.36
ECHDC1-212ENST00000461239 SPTLC1O15269 473 aa12.77□□□□□ -0.37
ECHDC1-212ENST00000461239 FAM69CQ0P6D2 419 aa12.77□□□□□ -0.37
ECHDC1-212ENST00000461239 SPDYE5A6NIY4 337 aa12.76□□□□□ -0.37
ECHDC1-212ENST00000461239 TRAK2O60296 914 aa12.76□□□□□ -0.37
ECHDC1-212ENST00000461239 RSBN1LQ6PCB5 846 aaPredicted RBP12.76□□□□□ -0.37
ECHDC1-212ENST00000461239 WDR7Q9Y4E6 1490 aa12.76□□□□□ -0.37
ECHDC1-212ENST00000461239 EPRSP07814 1512 aaKnown RBP12.76□□□□□ -0.37
ECHDC1-212ENST00000461239 MOXD2PA6NHM9 499 aa12.75□□□□□ -0.37
ECHDC1-212ENST00000461239 APBB1O00213 710 aa12.75□□□□□ -0.37
ECHDC1-212ENST00000461239 CDK13Q14004 1512 aaKnown RBP12.75□□□□□ -0.37
ECHDC1-212ENST00000461239 NUTM1Q86Y26 1132 aa12.75□□□□□ -0.37
ECHDC1-212ENST00000461239 BANK1Q8NDB2 785 aa12.75□□□□□ -0.37
ECHDC1-212ENST00000461239 CASKIN1Q8WXD9 1431 aa12.75□□□□□ -0.37
ECHDC1-212ENST00000461239 KIAA1468Q9P260 1216 aa12.75□□□□□ -0.37
ECHDC1-212ENST00000461239 PCF11O94913 1555 aaKnown RBP12.74□□□□□ -0.37
ECHDC1-212ENST00000461239 POM121Q96HA1 1249 aa12.74□□□□□ -0.37
ECHDC1-212ENST00000461239 LRRIQ1Q96JM4 1722 aa12.74□□□□□ -0.37
ECHDC1-212ENST00000461239 PSEN2P49810 448 aa12.73□□□□□ -0.37
ECHDC1-212ENST00000461239 POTEEQ6S8J3 1075 aa12.73□□□□□ -0.37
ECHDC1-212ENST00000461239 KCNH8Q96L42 1107 aa12.73□□□□□ -0.37
ECHDC1-212ENST00000461239 GLI2P10070 1586 aa12.73□□□□□ -0.37
ECHDC1-212ENST00000461239 GJA5P36382 358 aa12.72□□□□□ -0.37
ECHDC1-212ENST00000461239 SNRKQ9NRH2 765 aa12.72□□□□□ -0.37
ECHDC1-212ENST00000461239 HECW1Q76N89 1606 aa12.71□□□□□ -0.37
ECHDC1-212ENST00000461239 NDUFV2P19404 249 aa12.71□□□□□ -0.37
ECHDC1-212ENST00000461239 TMEM259Q4ZIN3 620 aa12.71□□□□□ -0.37
ECHDC1-212ENST00000461239 FNBP4Q8N3X1 1017 aaPredicted RBP12.71□□□□□ -0.37
ECHDC1-212ENST00000461239 RDH13Q8NBN7 331 aa12.71□□□□□ -0.37
ECHDC1-212ENST00000461239 KRTAP3-3Q9BYR6 98 aa12.71□□□□□ -0.37
ECHDC1-212ENST00000461239 KRTAP3-2Q9BYR7 98 aa12.71□□□□□ -0.37
ECHDC1-212ENST00000461239 PROSER2Q86WR7 435 aaPredicted RBP12.7□□□□□ -0.38
ECHDC1-212ENST00000461239 ARID3AQ99856 593 aa12.7□□□□□ -0.38
ECHDC1-212ENST00000461239 FYCO1Q9BQS8 1478 aa12.7□□□□□ -0.38
ECHDC1-212ENST00000461239 QPCTQ16769 361 aa12.69□□□□□ -0.38
ECHDC1-212ENST00000461239 SLC4A5Q9BY07 1137 aa12.69□□□□□ -0.38
ECHDC1-212ENST00000461239 RABGEF1Q9UJ41 708 aa12.69□□□□□ -0.38
ECHDC1-212ENST00000461239 POTEB3A0JP26 581 aa12.68□□□□□ -0.38
ECHDC1-212ENST00000461239 ARHGAP33O14559 1287 aa12.68□□□□□ -0.38
ECHDC1-212ENST00000461239 LILRB3O75022 631 aa12.68□□□□□ -0.38
ECHDC1-212ENST00000461239 KDM4AO75164 1064 aa12.68□□□□□ -0.38
ECHDC1-212ENST00000461239 GCGRP47871 477 aa12.68□□□□□ -0.38
ECHDC1-212ENST00000461239 CSPP1Q1MSJ5 1256 aa12.68□□□□□ -0.38
ECHDC1-212ENST00000461239 POTEBQ6S5H4 581 aa12.68□□□□□ -0.38
ECHDC1-212ENST00000461239 COG6Q9Y2V7 657 aa12.68□□□□□ -0.38
ECHDC1-212ENST00000461239 PCDHB15Q9Y5E8 787 aa12.68□□□□□ -0.38
ECHDC1-212ENST00000461239 PPRC1Q5VV67 1664 aaKnown RBP12.67□□□□□ -0.38
ECHDC1-212ENST00000461239 PLEKHD1A6NEE1 506 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms