RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 KIF7Q2M1P5 1343 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 PANK3Q9H999 370 aa10.82□□□□□ -0.68
BRCA1-205ENST00000461221 FANCIQ9NVI1 1328 aa10.81□□□□□ -0.68
BRCA1-205ENST00000461221 MRE11P49959 708 aa10.81□□□□□ -0.68
BRCA1-205ENST00000461221 ZBED9Q6R2W3 1325 aa10.81□□□□□ -0.68
BRCA1-205ENST00000461221 TSPYL1Q9H0U9 437 aa10.81□□□□□ -0.68
BRCA1-205ENST00000461221 MAGEC2Q9UBF1 373 aaPredicted RBP10.81□□□□□ -0.68
BRCA1-205ENST00000461221 SYCP1Q15431 976 aa10.8□□□□□ -0.68
BRCA1-205ENST00000461221 GOLGA6L7A0A1B0GV03 622 aa10.8□□□□□ -0.68
BRCA1-205ENST00000461221 SDF4Q9BRK5 362 aa10.8□□□□□ -0.68
BRCA1-205ENST00000461221 CCDC144AA2RUR9 1427 aa10.79□□□□□ -0.68
BRCA1-205ENST00000461221 DIAPH1O60610 1272 aaKnown RBP10.79□□□□□ -0.68
BRCA1-205ENST00000461221 FKBP5Q13451 457 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-205ENST00000461221 SART3Q15020 963 aaKnown RBP10.79□□□□□ -0.68
BRCA1-205ENST00000461221 NUTM2DQ5VT03 806 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-205ENST00000461221 TXLNBQ8N3L3 684 aa10.79□□□□□ -0.68
BRCA1-205ENST00000461221 PLIN1O60240 522 aa10.79□□□□□ -0.68
BRCA1-205ENST00000461221 NASPP49321 788 aaPredicted RBP10.79□□□□□ -0.68
BRCA1-205ENST00000461221 PAF1Q8N7H5 531 aa10.79□□□□□ -0.68
BRCA1-205ENST00000461221 WASHC2AQ641Q2 1341 aa10.79□□□□□ -0.68
BRCA1-205ENST00000461221 NUTM2FA1L443 756 aa10.79□□□□□ -0.68
BRCA1-205ENST00000461221 TXLNAP40222 546 aa10.79□□□□□ -0.68
BRCA1-205ENST00000461221 CCDC18Q5T9S5 1454 aa10.79□□□□□ -0.68
BRCA1-205ENST00000461221 GOLGA6L10A6NI86 522 aa10.78□□□□□ -0.68
BRCA1-205ENST00000461221 VGFO15240 615 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-205ENST00000461221 CDC45O75419 566 aa10.78□□□□□ -0.68
BRCA1-205ENST00000461221 FOSBP53539 338 aa10.78□□□□□ -0.68
BRCA1-205ENST00000461221 MBD3O95983 291 aa10.78□□□□□ -0.68
BRCA1-205ENST00000461221 NEFHP12036 1026 aa10.78□□□□□ -0.68
BRCA1-205ENST00000461221 WASHC4Q2M389 1173 aa10.78□□□□□ -0.68
BRCA1-205ENST00000461221 AXDND1Q5T1B0 1012 aaPredicted RBP10.78□□□□□ -0.68
BRCA1-205ENST00000461221 CDK5RAP3Q96JB5 506 aa10.78□□□□□ -0.68
BRCA1-205ENST00000461221 LUC7LQ9NQ29 371 aaKnown RBP10.78□□□□□ -0.68
BRCA1-205ENST00000461221 HMGN5P82970 282 aaKnown RBP10.78□□□□□ -0.68
BRCA1-205ENST00000461221 C22orf23Q9BZE7 217 aa10.78□□□□□ -0.68
BRCA1-205ENST00000461221 TMEM132AQ24JP5 1023 aa10.77□□□□□ -0.68
BRCA1-205ENST00000461221 KINO60870 393 aaKnown RBP10.77□□□□□ -0.69
BRCA1-205ENST00000461221 GNAI1P63096 354 aa10.77□□□□□ -0.69
BRCA1-205ENST00000461221 TRIM5Q9C035 493 aa10.77□□□□□ -0.69
BRCA1-205ENST00000461221 CT47B1P0C2W7 299 aaPredicted RBP10.77□□□□□ -0.69
BRCA1-205ENST00000461221 RABEP1Q15276 862 aa10.77□□□□□ -0.69
BRCA1-205ENST00000461221 SEPT7Q16181 437 aaKnown RBP10.77□□□□□ -0.69
BRCA1-205ENST00000461221 CCAR1Q8IX12 1150 aaKnown RBP10.77□□□□□ -0.69
BRCA1-205ENST00000461221 KIAA0754O94854 1291 aa10.77□□□□□ -0.69
BRCA1-205ENST00000461221 SMC2O95347 1197 aa10.77□□□□□ -0.69
BRCA1-205ENST00000461221 ZNHIT6Q9NWK9 470 aaKnown RBP10.77□□□□□ -0.69
BRCA1-205ENST00000461221 CNTROBQ8N137 903 aa10.76□□□□□ -0.69
BRCA1-205ENST00000461221 PLCD4Q9BRC7 762 aa10.76□□□□□ -0.69
BRCA1-205ENST00000461221 RIPK4P57078 832 aa10.76□□□□□ -0.69
BRCA1-205ENST00000461221 TTLL5Q6EMB2 1281 aa10.76□□□□□ -0.69
BRCA1-205ENST00000461221 ZNF396Q96N95 335 aaPredicted RBP10.76□□□□□ -0.69
BRCA1-205ENST00000461221 EZRP15311 586 aaKnown RBP10.76□□□□□ -0.69
BRCA1-205ENST00000461221 CCDC27Q2M243 656 aa10.76□□□□□ -0.69
BRCA1-205ENST00000461221 SLC3A2P08195 630 aaKnown RBP10.75□□□□□ -0.69
BRCA1-205ENST00000461221 PDCP20941 246 aa10.75□□□□□ -0.69
BRCA1-205ENST00000461221 HNRNPMP52272 730 aaKnown RBP eCLIP10.75□□□□□ -0.69
BRCA1-205ENST00000461221 SAMD1Q6SPF0 538 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-205ENST00000461221 TSPY26PQ9H489 355 aa10.75□□□□□ -0.69
BRCA1-205ENST00000461221 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-205ENST00000461221 TBC1D2BQ9UPU7 963 aa10.75□□□□□ -0.69
BRCA1-205ENST00000461221 BAZ1AQ9NRL2 1556 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-205ENST00000461221 ST20-MTHFSA0A0A6YYL1 179 aa10.75□□□□□ -0.69
BRCA1-205ENST00000461221 HIP1O00291 1037 aa10.75□□□□□ -0.69
BRCA1-205ENST00000461221 MCM2P49736 904 aa10.75□□□□□ -0.69
BRCA1-205ENST00000461221 NEUROD6Q96NK8 337 aa10.75□□□□□ -0.69
BRCA1-205ENST00000461221 IKQ13123 557 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-205ENST00000461221 INCENPQ9NQS7 918 aa10.75□□□□□ -0.69
BRCA1-205ENST00000461221 APAF1O14727 1248 aa10.75□□□□□ -0.69
BRCA1-205ENST00000461221 SKIDA1Q1XH10 827 aa10.74□□□□□ -0.69
BRCA1-205ENST00000461221 RUNDC1Q96C34 613 aa10.74□□□□□ -0.69
BRCA1-205ENST00000461221 DACH1Q9UI36 760 aa10.74□□□□□ -0.69
BRCA1-205ENST00000461221 HSP90AB3PQ58FF7 597 aa10.74□□□□□ -0.69
BRCA1-205ENST00000461221 RIC3Q7Z5B4 369 aa10.74□□□□□ -0.69
BRCA1-205ENST00000461221 TSPYL4Q9UJ04 414 aa10.74□□□□□ -0.69
BRCA1-205ENST00000461221 KRT18P05783 430 aaKnown RBP10.74□□□□□ -0.69
BRCA1-205ENST00000461221 FYB1O15117 783 aa10.74□□□□□ -0.69
BRCA1-205ENST00000461221 NACADO15069 1562 aa10.74□□□□□ -0.69
BRCA1-205ENST00000461221 ERLIN1O75477 346 aa10.73□□□□□ -0.69
BRCA1-205ENST00000461221 NECTIN2Q92692 538 aa10.73□□□□□ -0.69
BRCA1-205ENST00000461221 SYTL4Q96C24 671 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-205ENST00000461221 JMYQ8N9B5 988 aa10.73□□□□□ -0.69
BRCA1-205ENST00000461221 EIF3JO75822 258 aaKnown RBP10.73□□□□□ -0.69
BRCA1-205ENST00000461221 ANKRD62A6NC57 917 aa10.73□□□□□ -0.69
BRCA1-205ENST00000461221 UBTFL1P0CB47 393 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-205ENST00000461221 USP8P40818 1118 aa10.73□□□□□ -0.69
BRCA1-205ENST00000461221 PRKRIP1Q9H875 184 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-205ENST00000461221 ENOX2Q16206 610 aaKnown RBP10.73□□□□□ -0.69
BRCA1-205ENST00000461221 FSD1Q9BTV5 496 aa10.73□□□□□ -0.69
BRCA1-205ENST00000461221 STIM1Q13586 685 aa10.72□□□□□ -0.69
BRCA1-205ENST00000461221 CCDC181Q5TID7 509 aa10.72□□□□□ -0.69
BRCA1-205ENST00000461221 MEX3CQ5U5Q3 659 aaKnown RBP10.72□□□□□ -0.69
BRCA1-205ENST00000461221 SOGA1O94964 1423 aa10.72□□□□□ -0.69
BRCA1-205ENST00000461221 IQCEQ6IPM2 695 aa10.72□□□□□ -0.69
BRCA1-205ENST00000461221 CAVIN1Q6NZI2 390 aaKnown RBP10.72□□□□□ -0.69
BRCA1-205ENST00000461221 LNPKQ9C0E8 428 aa10.72□□□□□ -0.69
BRCA1-205ENST00000461221 PDCL3Q9H2J4 239 aa10.72□□□□□ -0.69
BRCA1-205ENST00000461221 PPFIBP1Q86W92 1011 aa10.71□□□□□ -0.69
BRCA1-205ENST00000461221 RAPGEF4Q8WZA2 1011 aa10.71□□□□□ -0.69
BRCA1-205ENST00000461221 PSME1Q06323 249 aa10.71□□□□□ -0.7
BRCA1-205ENST00000461221 STK38Q15208 465 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms