RNA–Protein interactions for RNA: ENST00000461043.6

ERGIC3-211, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 728 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-211ENST00000461043 ARHGEF28Q8N1W1 1705 aaKnown RBP17.41■□□□□ 0.38
ERGIC3-211ENST00000461043 MST1RQ04912 1400 aa17.41■□□□□ 0.38
ERGIC3-211ENST00000461043 PRAM1Q96QH2 718 aa17.41■□□□□ 0.38
ERGIC3-211ENST00000461043 TRAK1Q9UPV9 953 aa17.41■□□□□ 0.38
ERGIC3-211ENST00000461043 RALGAPBQ86X10 1494 aa17.4■□□□□ 0.38
ERGIC3-211ENST00000461043 ATF3P18847 181 aa17.4■□□□□ 0.38
ERGIC3-211ENST00000461043 SLAIN2Q9P270 581 aa17.4■□□□□ 0.38
ERGIC3-211ENST00000461043 PIP4K2BP78356 416 aa17.39■□□□□ 0.37
ERGIC3-211ENST00000461043 ADGRB2O60241 1585 aa17.38■□□□□ 0.37
ERGIC3-211ENST00000461043 ROBO1Q9Y6N7 1651 aa17.38■□□□□ 0.37
ERGIC3-211ENST00000461043 ROCK2O75116 1388 aaKnown RBP17.37■□□□□ 0.37
ERGIC3-211ENST00000461043 C1orf167Q5SNV9 1468 aa17.36■□□□□ 0.37
ERGIC3-211ENST00000461043 POGKQ9P215 609 aa17.35■□□□□ 0.37
ERGIC3-211ENST00000461043 SCAF1Q9H7N4 1312 aaKnown RBP17.34■□□□□ 0.37
ERGIC3-211ENST00000461043 FMN2Q9NZ56 1722 aa17.34■□□□□ 0.37
ERGIC3-211ENST00000461043 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.36
ERGIC3-211ENST00000461043 HSPA1LP34931 641 aa17.32■□□□□ 0.36
ERGIC3-211ENST00000461043 BRINP3Q76B58 766 aa17.32■□□□□ 0.36
ERGIC3-211ENST00000461043 AHDC1Q5TGY3 1603 aaPredicted RBP17.31■□□□□ 0.36
ERGIC3-211ENST00000461043 MINK1Q8N4C8 1332 aaPredicted RBP17.29■□□□□ 0.36
ERGIC3-211ENST00000461043 CENPJQ9HC77 1338 aaPredicted RBP17.29■□□□□ 0.36
ERGIC3-211ENST00000461043 USP32Q8NFA0 1604 aa17.29■□□□□ 0.36
ERGIC3-211ENST00000461043 HIRIP3Q9BW71 556 aaPredicted RBP17.28■□□□□ 0.36
ERGIC3-211ENST00000461043 CARD11Q9BXL7 1154 aa17.28■□□□□ 0.36
ERGIC3-211ENST00000461043 ANKARQ7Z5J8 1434 aa17.28■□□□□ 0.36
ERGIC3-211ENST00000461043 NHSL1Q5SYE7 1610 aa17.28■□□□□ 0.36
ERGIC3-211ENST00000461043 QRICH2Q9H0J4 1663 aa17.27■□□□□ 0.36
ERGIC3-211ENST00000461043 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.36
ERGIC3-211ENST00000461043 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.35
ERGIC3-211ENST00000461043 TULP4Q9NRJ4 1543 aa17.26■□□□□ 0.35
ERGIC3-211ENST00000461043 COL16A1Q07092 1604 aaPredicted RBP17.26■□□□□ 0.35
ERGIC3-211ENST00000461043 ORAI2Q96SN7 254 aa17.26■□□□□ 0.35
ERGIC3-211ENST00000461043 SBNO2Q9Y2G9 1366 aa17.25■□□□□ 0.35
ERGIC3-211ENST00000461043 PHLPP1O60346 1717 aa17.24■□□□□ 0.35
ERGIC3-211ENST00000461043 ATP7BP35670 1465 aa17.24■□□□□ 0.35
ERGIC3-211ENST00000461043 PRR36Q9H6K5 1346 aa17.23■□□□□ 0.35
ERGIC3-211ENST00000461043 NUTM2FA1L443 756 aa17.23■□□□□ 0.35
ERGIC3-211ENST00000461043 ESCO1Q5FWF5 840 aa17.22■□□□□ 0.35
ERGIC3-211ENST00000461043 KIF1AQ12756 1690 aa17.22■□□□□ 0.35
ERGIC3-211ENST00000461043 CDK19Q9BWU1 502 aa17.21■□□□□ 0.35
ERGIC3-211ENST00000461043 RGPD8O14715 1765 aaPredicted RBP17.2■□□□□ 0.34
ERGIC3-211ENST00000461043 PXDNQ92626 1479 aa17.2■□□□□ 0.34
ERGIC3-211ENST00000461043 SOS2Q07890 1332 aaPredicted RBP17.2■□□□□ 0.34
ERGIC3-211ENST00000461043 TOPAZ1Q8N9V7 1692 aa17.2■□□□□ 0.34
ERGIC3-211ENST00000461043 USP47Q96K76 1375 aa17.19■□□□□ 0.34
ERGIC3-211ENST00000461043 DDX17Q92841 729 aaKnown RBP17.19■□□□□ 0.34
ERGIC3-211ENST00000461043 NUDT16Q96DE0 195 aaKnown RBP17.18■□□□□ 0.34
ERGIC3-211ENST00000461043 PHF8Q9UPP1 1060 aa17.18■□□□□ 0.34
ERGIC3-211ENST00000461043 NPHP3Q7Z494 1330 aa17.18■□□□□ 0.34
ERGIC3-211ENST00000461043 TESK2Q96S53 571 aa17.17■□□□□ 0.34
ERGIC3-211ENST00000461043 ITSN1Q15811 1721 aa17.16■□□□□ 0.34
ERGIC3-211ENST00000461043 ST20-MTHFSA0A0A6YYL1 179 aa17.16■□□□□ 0.34
ERGIC3-211ENST00000461043 EVC2Q86UK5 1308 aa17.16■□□□□ 0.34
ERGIC3-211ENST00000461043 JCADQ9P266 1359 aa17.15■□□□□ 0.34
ERGIC3-211ENST00000461043 FOXO3O43524 673 aa17.15■□□□□ 0.34
ERGIC3-211ENST00000461043 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
ERGIC3-211ENST00000461043 CABP2Q9NPB3 220 aa17.14■□□□□ 0.33
ERGIC3-211ENST00000461043 CCDC61Q9Y6R9 512 aa17.14■□□□□ 0.33
ERGIC3-211ENST00000461043 PLEKHG3A1L390 1219 aa17.13■□□□□ 0.33
ERGIC3-211ENST00000461043 SRPK2P78362 688 aaKnown RBP17.13■□□□□ 0.33
ERGIC3-211ENST00000461043 POLR3AO14802 1390 aaPredicted RBP17.13■□□□□ 0.33
ERGIC3-211ENST00000461043 PMFBP1Q8TBY8 1022 aa17.12■□□□□ 0.33
ERGIC3-211ENST00000461043 LRRC59Q96AG4 307 aaKnown RBP17.12■□□□□ 0.33
ERGIC3-211ENST00000461043 PNPLA6Q8IY17 1366 aa17.11■□□□□ 0.33
ERGIC3-211ENST00000461043 PPIP5K1Q6PFW1 1433 aa17.11■□□□□ 0.33
ERGIC3-211ENST00000461043 XPCQ01831 940 aaPredicted RBP17.1■□□□□ 0.33
ERGIC3-211ENST00000461043 PUS7Q96PZ0 661 aaKnown RBP17.1■□□□□ 0.33
ERGIC3-211ENST00000461043 TRPM3Q9HCF6 1732 aaPredicted RBP17.1■□□□□ 0.33
ERGIC3-211ENST00000461043 KRT28Q7Z3Y7 464 aa17.09■□□□□ 0.33
ERGIC3-211ENST00000461043 SBNO1A3KN83 1393 aa17.09■□□□□ 0.33
ERGIC3-211ENST00000461043 ATAD2Q6PL18 1390 aa17.09■□□□□ 0.33
ERGIC3-211ENST00000461043 MED1Q15648 1581 aaPredicted RBP17.09■□□□□ 0.33
ERGIC3-211ENST00000461043 COL22A1Q8NFW1 1626 aaPredicted RBP17.09■□□□□ 0.33
ERGIC3-211ENST00000461043 DISP3Q9P2K9 1392 aa17.08■□□□□ 0.32
ERGIC3-211ENST00000461043 SPATA31A3Q5VYP0 1347 aa17.08■□□□□ 0.32
ERGIC3-211ENST00000461043 SLC24A1O60721 1099 aa17.08■□□□□ 0.32
ERGIC3-211ENST00000461043 TNS3Q68CZ2 1445 aa17.07■□□□□ 0.32
ERGIC3-211ENST00000461043 ACEP12821 1306 aa17.07■□□□□ 0.32
ERGIC3-211ENST00000461043 SPATA31A6Q5VVP1 1343 aa17.07■□□□□ 0.32
ERGIC3-211ENST00000461043 LRP6O75581 1613 aa17.07■□□□□ 0.32
ERGIC3-211ENST00000461043 PSME1Q06323 249 aa17.06■□□□□ 0.32
ERGIC3-211ENST00000461043 NGDNQ8NEJ9 315 aaKnown RBP17.06■□□□□ 0.32
ERGIC3-211ENST00000461043 CABP1Q9NZU7 370 aa17.06■□□□□ 0.32
ERGIC3-211ENST00000461043 ALS2Q96Q42 1657 aa17.05■□□□□ 0.32
ERGIC3-211ENST00000461043 EIF4G2P78344 907 aaKnown RBP eCLIP17.05■□□□□ 0.32
ERGIC3-211ENST00000461043 CD163L1Q9NR16 1453 aa17.04■□□□□ 0.32
ERGIC3-211ENST00000461043 CPSF1Q10570 1443 aaKnown RBP17.04■□□□□ 0.32
ERGIC3-211ENST00000461043 HSPA5P11021 654 aaKnown RBP17.03■□□□□ 0.32
ERGIC3-211ENST00000461043 TMF1P82094 1093 aa17.03■□□□□ 0.32
ERGIC3-211ENST00000461043 SSH2Q76I76 1423 aa17.03■□□□□ 0.32
ERGIC3-211ENST00000461043 USP6P35125 1406 aa17.02■□□□□ 0.31
ERGIC3-211ENST00000461043 ARHGEF10O15013 1369 aa17.02■□□□□ 0.31
ERGIC3-211ENST00000461043 BRD4O60885 1362 aaPredicted RBP17.02■□□□□ 0.31
ERGIC3-211ENST00000461043 AKAP12Q02952 1782 aa17.01■□□□□ 0.31
ERGIC3-211ENST00000461043 NINLQ9Y2I6 1382 aa17.01■□□□□ 0.31
ERGIC3-211ENST00000461043 NRKQ7Z2Y5 1582 aa16.99■□□□□ 0.31
ERGIC3-211ENST00000461043 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
ERGIC3-211ENST00000461043 SLC12A5Q9H2X9 1139 aa16.98■□□□□ 0.31
ERGIC3-211ENST00000461043 MON2Q7Z3U7 1717 aa16.98■□□□□ 0.31
ERGIC3-211ENST00000461043 CRYBG1Q9Y4K1 1723 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms