RNA–Protein interactions for RNA: ENST00000460810.1

CCDC58-202, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-202ENST00000460810 MMP16P51512 607 aa9.11□□□□□ -0.95
CCDC58-202ENST00000460810 HAP1P54257 671 aaPredicted RBP9.11□□□□□ -0.95
CCDC58-202ENST00000460810 MAP2K5Q13163 448 aa9.11□□□□□ -0.95
CCDC58-202ENST00000460810 AXIN1O15169 862 aa9.1□□□□□ -0.95
CCDC58-202ENST00000460810 WNT7AO00755 349 aa9.09□□□□□ -0.95
CCDC58-202ENST00000460810 KDM4AO75164 1064 aa9.09□□□□□ -0.95
CCDC58-202ENST00000460810 TTC24A2A3L6 582 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-202ENST00000460810 TULP1O00294 542 aaPredicted RBP9.08□□□□□ -0.96
CCDC58-202ENST00000460810 IRF6O14896 467 aa9.08□□□□□ -0.96
CCDC58-202ENST00000460810 USP46P62068 366 aa9.08□□□□□ -0.96
CCDC58-202ENST00000460810 TREML4Q6UXN2 200 aa9.08□□□□□ -0.96
CCDC58-202ENST00000460810 TRIM32Q13049 653 aa9.07□□□□□ -0.96
CCDC58-202ENST00000460810 USB1Q9BQ65 265 aaKnown RBP9.07□□□□□ -0.96
CCDC58-202ENST00000460810 DACH1Q9UI36 760 aa9.07□□□□□ -0.96
CCDC58-202ENST00000460810 MINK1Q8N4C8 1332 aaPredicted RBP9.06□□□□□ -0.96
CCDC58-202ENST00000460810 DXOO77932 396 aaKnown RBP9.06□□□□□ -0.96
CCDC58-202ENST00000460810 SNIP1Q8TAD8 396 aaKnown RBP9.06□□□□□ -0.96
CCDC58-202ENST00000460810 KDM2AQ9Y2K7 1162 aa9.06□□□□□ -0.96
CCDC58-202ENST00000460810 LCE2AQ5TA79 106 aaPredicted RBP9.05□□□□□ -0.96
CCDC58-202ENST00000460810 GMPR2Q9P2T1 348 aaKnown RBP9.04□□□□□ -0.96
CCDC58-202ENST00000460810 C11orf95C9JLR9 678 aaPredicted RBP9.03□□□□□ -0.96
CCDC58-202ENST00000460810 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
CCDC58-202ENST00000460810 REPIN1Q9BWE0 567 aaKnown RBP9.03□□□□□ -0.96
CCDC58-202ENST00000460810 SMPD1P17405 629 aa9.02□□□□□ -0.97
CCDC58-202ENST00000460810 HOXA2O43364 376 aa9.01□□□□□ -0.97
CCDC58-202ENST00000460810 MRGPRX2Q96LB1 330 aa9.01□□□□□ -0.97
CCDC58-202ENST00000460810 WNT7BP56706 349 aa8.99□□□□□ -0.97
CCDC58-202ENST00000460810 CCDC24Q8N4L8 307 aa8.99□□□□□ -0.97
CCDC58-202ENST00000460810 GPCPD1Q9NPB8 672 aa8.99□□□□□ -0.97
CCDC58-202ENST00000460810 WFS1O76024 890 aa8.98□□□□□ -0.97
CCDC58-202ENST00000460810 CLCN1P35523 988 aa8.98□□□□□ -0.97
CCDC58-202ENST00000460810 HLA-CQ95604 372 aa8.98□□□□□ -0.97
CCDC58-202ENST00000460810 J3QL48 77 aa8.97□□□□□ -0.97
CCDC58-202ENST00000460810 RC3H1Q5TC82 1133 aaKnown RBP8.97□□□□□ -0.97
CCDC58-202ENST00000460810 VSIG10Q8N0Z9 540 aa8.97□□□□□ -0.97
CCDC58-202ENST00000460810 CCDC102AQ96A19 550 aa8.97□□□□□ -0.97
CCDC58-202ENST00000460810 ATP13A2Q9NQ11 1180 aa8.97□□□□□ -0.97
CCDC58-202ENST00000460810 FAM217BQ9NTX9 383 aaPredicted RBP8.97□□□□□ -0.97
CCDC58-202ENST00000460810 JUNDP17535 347 aa8.96□□□□□ -0.98
CCDC58-202ENST00000460810 SENP2Q9HC62 589 aa8.96□□□□□ -0.98
CCDC58-202ENST00000460810 SKOR1P84550 965 aa8.95□□□□□ -0.98
CCDC58-202ENST00000460810 NUTM1Q86Y26 1132 aa8.95□□□□□ -0.98
CCDC58-202ENST00000460810 NFX1Q12986 1120 aaKnown RBP8.94□□□□□ -0.98
CCDC58-202ENST00000460810 RETREG3Q86VR2 466 aa8.94□□□□□ -0.98
CCDC58-202ENST00000460810 GUCA2AQ02747 115 aa8.93□□□□□ -0.98
CCDC58-202ENST00000460810 KRI1Q8N9T8 703 aaKnown RBP8.93□□□□□ -0.98
CCDC58-202ENST00000460810 HPS1Q92902 700 aa8.93□□□□□ -0.98
CCDC58-202ENST00000460810 KIFC2Q96AC6 838 aa8.93□□□□□ -0.98
CCDC58-202ENST00000460810 TRIM47Q96LD4 638 aa8.93□□□□□ -0.98
CCDC58-202ENST00000460810 SYMPKQ92797 1274 aaKnown RBP8.92□□□□□ -0.98
CCDC58-202ENST00000460810 NUDT12Q9BQG2 462 aa8.92□□□□□ -0.98
CCDC58-202ENST00000460810 WIPF1O43516 503 aa8.91□□□□□ -0.98
CCDC58-202ENST00000460810 SIAH2O43255 324 aa8.89□□□□□ -0.99
CCDC58-202ENST00000460810 FDX1P10109 184 aa8.89□□□□□ -0.99
CCDC58-202ENST00000460810 SNRPBP14678 240 aaKnown RBP8.89□□□□□ -0.99
CCDC58-202ENST00000460810 TERTO14746 1132 aaKnown RBP8.88□□□□□ -0.99
CCDC58-202ENST00000460810 ALDH1A1P00352 501 aa8.88□□□□□ -0.99
CCDC58-202ENST00000460810 PTCRAQ6ISU1 281 aaPredicted RBP8.88□□□□□ -0.99
CCDC58-202ENST00000460810 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.88□□□□□ -0.99
CCDC58-202ENST00000460810 SSTR3P32745 418 aaPredicted RBP8.87□□□□□ -0.99
CCDC58-202ENST00000460810 INSM1Q01101 510 aaPredicted RBP8.87□□□□□ -0.99
CCDC58-202ENST00000460810 EHBP1Q8NDI1 1231 aa8.87□□□□□ -0.99
CCDC58-202ENST00000460810 PCDHGC3Q9UN70 934 aa8.87□□□□□ -0.99
CCDC58-202ENST00000460810 C6orf229H3BNL8 230 aa8.86□□□□□ -0.99
CCDC58-202ENST00000460810 CCNYL3P0C7X3 344 aa8.86□□□□□ -0.99
CCDC58-202ENST00000460810 MS4A1P11836 297 aa8.86□□□□□ -0.99
CCDC58-202ENST00000460810 STK17AQ9UEE5 414 aa8.86□□□□□ -0.99
CCDC58-202ENST00000460810 PTPRNQ16849 979 aa8.85□□□□□ -0.99
CCDC58-202ENST00000460810 EVA1BQ9NVM1 165 aa8.85□□□□□ -0.99
CCDC58-202ENST00000460810 SH3BP2P78314 561 aa8.84□□□□□ -0.99
CCDC58-202ENST00000460810 SPIRE2Q8WWL2 714 aa8.84□□□□□ -0.99
CCDC58-202ENST00000460810 WASF2Q9Y6W5 498 aa8.83□□□□□ -1
CCDC58-202ENST00000460810 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
CCDC58-202ENST00000460810 DESI1Q6ICB0 168 aa8.82□□□□□ -1
CCDC58-202ENST00000460810 BARGINQ6ZT62 677 aa8.82□□□□□ -1
CCDC58-202ENST00000460810 CAPN5O15484 640 aaPredicted RBP8.81□□□□□ -1
CCDC58-202ENST00000460810 AMHR2Q16671 573 aa8.81□□□□□ -1
CCDC58-202ENST00000460810 UNC93B1Q9H1C4 597 aa8.81□□□□□ -1
CCDC58-202ENST00000460810 MOXD2PA6NHM9 499 aa8.8□□□□□ -1
CCDC58-202ENST00000460810 NDUFV2P19404 249 aa8.8□□□□□ -1
CCDC58-202ENST00000460810 KCNH2Q12809 1159 aa8.8□□□□□ -1
CCDC58-202ENST00000460810 TTLL12Q14166 644 aaPredicted RBP8.8□□□□□ -1
CCDC58-202ENST00000460810 LCE2CQ5TA81 110 aa8.8□□□□□ -1
CCDC58-202ENST00000460810 MPNDQ8N594 471 aa8.8□□□□□ -1
CCDC58-202ENST00000460810 SLC16A10Q8TF71 515 aa8.8□□□□□ -1
CCDC58-202ENST00000460810 GJA5P36382 358 aa8.79□□□□□ -1
CCDC58-202ENST00000460810 MTMR2Q13614 643 aa8.79□□□□□ -1
CCDC58-202ENST00000460810 NPAS3Q8IXF0 933 aa8.79□□□□□ -1
CCDC58-202ENST00000460810 PRR7Q8TB68 274 aa8.79□□□□□ -1
CCDC58-202ENST00000460810 NXF1Q9UBU9 619 aaKnown RBP8.79□□□□□ -1
CCDC58-202ENST00000460810 PLEKHG3A1L390 1219 aa8.78□□□□□ -1
CCDC58-202ENST00000460810 ZMYND10O75800 440 aa8.78□□□□□ -1
CCDC58-202ENST00000460810 VARSP26640 1264 aaKnown RBP8.78□□□□□ -1
CCDC58-202ENST00000460810 DIXDC1Q155Q3 683 aa8.78□□□□□ -1
CCDC58-202ENST00000460810 TRIM46Q7Z4K8 759 aa8.78□□□□□ -1
CCDC58-202ENST00000460810 BAP1Q92560 729 aa8.78□□□□□ -1
CCDC58-202ENST00000460810 ZNF511Q8NB15 262 aa8.77□□□□□ -1.01
CCDC58-202ENST00000460810 GIGYF2Q6Y7W6 1299 aaKnown RBP8.76□□□□□ -1.01
CCDC58-202ENST00000460810 BMP1P13497 986 aa8.75□□□□□ -1.01
CCDC58-202ENST00000460810 LINC01559Q495D7 138 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms