RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 SMG6Q86US8 1419 aaKnown RBP21.91■■□□□ 1.1
CHRD-208ENST00000460627 MEX3CQ5U5Q3 659 aaKnown RBP21.91■■□□□ 1.1
CHRD-208ENST00000460627 PNISRQ8TF01 805 aaKnown RBP21.91■■□□□ 1.1
CHRD-208ENST00000460627 KDM5BQ9UGL1 1544 aa21.9■■□□□ 1.1
CHRD-208ENST00000460627 NECTIN2Q92692 538 aa21.9■■□□□ 1.1
CHRD-208ENST00000460627 ADGRF5Q8IZF2 1346 aa21.89■■□□□ 1.1
CHRD-208ENST00000460627 ITSN2Q9NZM3 1697 aa21.89■■□□□ 1.1
CHRD-208ENST00000460627 SPRYD3Q8NCJ5 442 aa21.89■■□□□ 1.1
CHRD-208ENST00000460627 FAM135AQ9P2D6 1515 aa21.89■■□□□ 1.09
CHRD-208ENST00000460627 FRAT2O75474 233 aaPredicted RBP21.87■■□□□ 1.09
CHRD-208ENST00000460627 GBP4Q96PP9 640 aa21.87■■□□□ 1.09
CHRD-208ENST00000460627 ZNF518AQ6AHZ1 1483 aa21.87■■□□□ 1.09
CHRD-208ENST00000460627 FAM161AQ3B820 660 aa21.87■■□□□ 1.09
CHRD-208ENST00000460627 DUOX2Q9NRD8 1548 aa21.86■■□□□ 1.09
CHRD-208ENST00000460627 SULT6B1Q6IMI4 303 aa21.86■■□□□ 1.09
CHRD-208ENST00000460627 ISY1Q9ULR0 285 aaKnown RBP21.86■■□□□ 1.09
CHRD-208ENST00000460627 G3V3G9 751 aa21.85■■□□□ 1.09
CHRD-208ENST00000460627 GNL2Q13823 731 aaKnown RBP21.85■■□□□ 1.09
CHRD-208ENST00000460627 DCAF8Q5TAQ9 597 aa21.85■■□□□ 1.09
CHRD-208ENST00000460627 A2MP01023 1474 aa21.85■■□□□ 1.09
CHRD-208ENST00000460627 PTMSP20962 102 aa21.85■■□□□ 1.09
CHRD-208ENST00000460627 NSD3Q9BZ95 1437 aa21.85■■□□□ 1.09
CHRD-208ENST00000460627 TATP17735 454 aaPredicted RBP21.84■■□□□ 1.09
CHRD-208ENST00000460627 LRRFIP1Q32MZ4 808 aaKnown RBP21.84■■□□□ 1.09
CHRD-208ENST00000460627 WAPLQ7Z5K2 1190 aa21.84■■□□□ 1.09
CHRD-208ENST00000460627 HSP90AB4PQ58FF6 505 aa21.84■■□□□ 1.09
CHRD-208ENST00000460627 PTPRKQ15262 1439 aa21.83■■□□□ 1.09
CHRD-208ENST00000460627 C14orf93Q9H972 538 aaKnown RBP21.83■■□□□ 1.09
CHRD-208ENST00000460627 SYCP2Q9BX26 1530 aa21.82■■□□□ 1.08
CHRD-208ENST00000460627 ST18O60284 1047 aa21.82■■□□□ 1.08
CHRD-208ENST00000460627 CCDC30Q5VVM6 783 aa21.82■■□□□ 1.08
CHRD-208ENST00000460627 NOS1P29475 1434 aa21.82■■□□□ 1.08
CHRD-208ENST00000460627 HTATSF1O43719 755 aaKnown RBP21.82■■□□□ 1.08
CHRD-208ENST00000460627 CEBPAP49715 358 aaPredicted RBP21.82■■□□□ 1.08
CHRD-208ENST00000460627 RILPL2Q969X0 211 aa21.82■■□□□ 1.08
CHRD-208ENST00000460627 WDR63Q8IWG1 891 aa21.81■■□□□ 1.08
CHRD-208ENST00000460627 CDCA7LQ96GN5 454 aa21.81■■□□□ 1.08
CHRD-208ENST00000460627 SLKQ9H2G2 1235 aaPredicted RBP21.81■■□□□ 1.08
CHRD-208ENST00000460627 SCAF11Q99590 1463 aaKnown RBP21.81■■□□□ 1.08
CHRD-208ENST00000460627 TCOF1Q13428 1488 aaKnown RBP21.81■■□□□ 1.08
CHRD-208ENST00000460627 TSHZ2Q9NRE2 1034 aa21.81■■□□□ 1.08
CHRD-208ENST00000460627 ABCC10Q5T3U5 1492 aa21.8■■□□□ 1.08
CHRD-208ENST00000460627 PLCB2Q00722 1185 aa21.8■■□□□ 1.08
CHRD-208ENST00000460627 ABCC2Q92887 1545 aa21.8■■□□□ 1.08
CHRD-208ENST00000460627 FCHSD2O94868 740 aa21.8■■□□□ 1.08
CHRD-208ENST00000460627 CT47B1P0C2W7 299 aaPredicted RBP21.8■■□□□ 1.08
CHRD-208ENST00000460627 PDE4AP27815 886 aa21.8■■□□□ 1.08
CHRD-208ENST00000460627 RIC3Q7Z5B4 369 aa21.8■■□□□ 1.08
CHRD-208ENST00000460627 AMOTL2Q9Y2J4 779 aa21.8■■□□□ 1.08
CHRD-208ENST00000460627 EXOSC9Q06265 439 aaKnown RBP21.8■■□□□ 1.08
CHRD-208ENST00000460627 IPO9Q96P70 1041 aaKnown RBP21.8■■□□□ 1.08
CHRD-208ENST00000460627 G3BP1Q13283 466 aaKnown RBP eCLIP21.79■■□□□ 1.08
CHRD-208ENST00000460627 KCNH5Q8NCM2 988 aa21.79■■□□□ 1.08
CHRD-208ENST00000460627 RUFY2Q8WXA3 655 aa21.78■■□□□ 1.08
CHRD-208ENST00000460627 TWISTNBQ3B726 338 aaPredicted RBP21.78■■□□□ 1.08
CHRD-208ENST00000460627 TRAPPC8Q9Y2L5 1435 aa21.78■■□□□ 1.08
CHRD-208ENST00000460627 TNRQ92752 1358 aa21.78■■□□□ 1.08
CHRD-208ENST00000460627 IFIT2P09913 472 aaKnown RBP21.78■■□□□ 1.08
CHRD-208ENST00000460627 PRDM11Q9NQV5 511 aa21.78■■□□□ 1.08
CHRD-208ENST00000460627 ABCA5Q8WWZ7 1642 aa21.78■■□□□ 1.08
CHRD-208ENST00000460627 DISP1Q96F81 1524 aa21.77■■□□□ 1.08
CHRD-208ENST00000460627 WASLO00401 505 aaPredicted RBP21.77■■□□□ 1.08
CHRD-208ENST00000460627 DIAPH3Q9NSV4 1193 aa21.77■■□□□ 1.08
CHRD-208ENST00000460627 GOLGA6L6A8MZA4 724 aa21.77■■□□□ 1.07
CHRD-208ENST00000460627 NRDCO43847 1150 aa21.77■■□□□ 1.07
CHRD-208ENST00000460627 PANK1Q8TE04 598 aa21.77■■□□□ 1.07
CHRD-208ENST00000460627 GNAI3P08754 354 aa21.76■■□□□ 1.07
CHRD-208ENST00000460627 ZNF530Q6P9A1 599 aaPredicted RBP21.76■■□□□ 1.07
CHRD-208ENST00000460627 USP35Q9P2H5 1018 aa21.76■■□□□ 1.07
CHRD-208ENST00000460627 KIF3AQ9Y496 699 aa21.76■■□□□ 1.07
CHRD-208ENST00000460627 REC8O95072 547 aa21.75■■□□□ 1.07
CHRD-208ENST00000460627 UBTFL1P0CB47 393 aaPredicted RBP21.75■■□□□ 1.07
CHRD-208ENST00000460627 PDE3AQ14432 1141 aa21.75■■□□□ 1.07
CHRD-208ENST00000460627 STRN4Q9NRL3 753 aa21.75■■□□□ 1.07
CHRD-208ENST00000460627 HSP90B1P14625 803 aaKnown RBP21.75■■□□□ 1.07
CHRD-208ENST00000460627 RRS1Q15050 365 aaKnown RBP21.74■■□□□ 1.07
CHRD-208ENST00000460627 CHMP4CQ96CF2 233 aa21.74■■□□□ 1.07
CHRD-208ENST00000460627 MSH5O43196 834 aa21.74■■□□□ 1.07
CHRD-208ENST00000460627 TOM1L2Q6ZVM7 507 aa21.74■■□□□ 1.07
CHRD-208ENST00000460627 SPG7Q9UQ90 795 aa21.74■■□□□ 1.07
CHRD-208ENST00000460627 AIMP1Q12904 312 aaKnown RBP21.74■■□□□ 1.07
CHRD-208ENST00000460627 C11orf95C9JLR9 678 aaPredicted RBP21.73■■□□□ 1.07
CHRD-208ENST00000460627 SHANK2Q9UPX8 1470 aa21.73■■□□□ 1.07
CHRD-208ENST00000460627 TOMM22Q9NS69 142 aa21.72■■□□□ 1.07
CHRD-208ENST00000460627 PHF8Q9UPP1 1060 aa21.71■■□□□ 1.07
CHRD-208ENST00000460627 ZNF428Q96B54 188 aa21.71■■□□□ 1.07
CHRD-208ENST00000460627 CFAP43Q8NDM7 1665 aa21.7■■□□□ 1.07
CHRD-208ENST00000460627 PBRM1Q86U86 1689 aa21.7■■□□□ 1.06
CHRD-208ENST00000460627 L1TD1Q5T7N2 865 aaKnown RBP21.7■■□□□ 1.06
CHRD-208ENST00000460627 HDGFL1Q5TGJ6 251 aa21.7■■□□□ 1.06
CHRD-208ENST00000460627 NINLQ9Y2I6 1382 aa21.7■■□□□ 1.06
CHRD-208ENST00000460627 UHRF1BP1LA0JNW5 1464 aa21.69■■□□□ 1.06
CHRD-208ENST00000460627 TSR2Q969E8 191 aaKnown RBP21.69■■□□□ 1.06
CHRD-208ENST00000460627 NFE2L2Q16236 605 aa21.68■■□□□ 1.06
CHRD-208ENST00000460627 SYAP1Q96A49 352 aaPredicted RBP21.68■■□□□ 1.06
CHRD-208ENST00000460627 ERC2O15083 957 aa21.68■■□□□ 1.06
CHRD-208ENST00000460627 LNPKQ9C0E8 428 aa21.68■■□□□ 1.06
CHRD-208ENST00000460627 CCDC184Q52MB2 194 aa21.68■■□□□ 1.06
CHRD-208ENST00000460627 ZKSCAN1P17029 563 aaPredicted RBP21.67■■□□□ 1.06
CHRD-208ENST00000460627 XPCQ01831 940 aaPredicted RBP21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms