RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 QRICH2Q9H0J4 1663 aa19.14■□□□□ 0.65
ERCC3-205ENST00000460485 NEFLP07196 543 aa19.13■□□□□ 0.65
ERCC3-205ENST00000460485 PROSER2Q86WR7 435 aaPredicted RBP19.13■□□□□ 0.65
ERCC3-205ENST00000460485 TMEM2Q9UHN6 1383 aa19.13■□□□□ 0.65
ERCC3-205ENST00000460485 SETD1AO15047 1707 aaKnown RBP19.12■□□□□ 0.65
ERCC3-205ENST00000460485 MYO5BQ9ULV0 1848 aa19.11■□□□□ 0.65
ERCC3-205ENST00000460485 ZNF772Q68DY9 489 aaPredicted RBP19.11■□□□□ 0.65
ERCC3-205ENST00000460485 SLAIN2Q9P270 581 aa19.11■□□□□ 0.65
ERCC3-205ENST00000460485 ARHGEF28Q8N1W1 1705 aaKnown RBP19.11■□□□□ 0.65
ERCC3-205ENST00000460485 NLRP13Q86W25 1043 aa19.1■□□□□ 0.65
ERCC3-205ENST00000460485 VGFO15240 615 aaPredicted RBP19.09■□□□□ 0.65
ERCC3-205ENST00000460485 ASXL1Q8IXJ9 1541 aa19.09■□□□□ 0.65
ERCC3-205ENST00000460485 LRPPRCP42704 1394 aaKnown RBP19.08■□□□□ 0.65
ERCC3-205ENST00000460485 SPATA31A6Q5VVP1 1343 aa19.08■□□□□ 0.65
ERCC3-205ENST00000460485 ADGRF5Q8IZF2 1346 aa19.08■□□□□ 0.65
ERCC3-205ENST00000460485 C14orf93Q9H972 538 aaKnown RBP19.08■□□□□ 0.64
ERCC3-205ENST00000460485 MSH6P52701 1360 aa19.07■□□□□ 0.64
ERCC3-205ENST00000460485 USP32Q8NFA0 1604 aa19.07■□□□□ 0.64
ERCC3-205ENST00000460485 PER1O15534 1290 aaPredicted RBP19.07■□□□□ 0.64
ERCC3-205ENST00000460485 TMC1Q8TDI8 760 aa19.07■□□□□ 0.64
ERCC3-205ENST00000460485 PHLPP1O60346 1717 aa19.06■□□□□ 0.64
ERCC3-205ENST00000460485 NKTRP30414 1462 aaKnown RBP19.06■□□□□ 0.64
ERCC3-205ENST00000460485 PUS7Q96PZ0 661 aaKnown RBP19.06■□□□□ 0.64
ERCC3-205ENST00000460485 STAG3Q9UJ98 1225 aa19.06■□□□□ 0.64
ERCC3-205ENST00000460485 SUPT16HQ9Y5B9 1047 aaKnown RBP19.06■□□□□ 0.64
ERCC3-205ENST00000460485 ERICH6BQ5W0A0 696 aa19.04■□□□□ 0.64
ERCC3-205ENST00000460485 FAM9BQ8IZU0 186 aa19.04■□□□□ 0.64
ERCC3-205ENST00000460485 SLC26A8Q96RN1 970 aa19.04■□□□□ 0.64
ERCC3-205ENST00000460485 CFAP70Q5T0N1 1121 aa19.03■□□□□ 0.64
ERCC3-205ENST00000460485 CENPJQ9HC77 1338 aaPredicted RBP19.02■□□□□ 0.64
ERCC3-205ENST00000460485 CCDC184Q52MB2 194 aa19.02■□□□□ 0.64
ERCC3-205ENST00000460485 PNISRQ8TF01 805 aaKnown RBP19.02■□□□□ 0.64
ERCC3-205ENST00000460485 RBM33Q96EV2 1170 aaKnown RBP19.02■□□□□ 0.64
ERCC3-205ENST00000460485 CHGAP10645 457 aaKnown RBP19.01■□□□□ 0.63
ERCC3-205ENST00000460485 RXRBP28702 533 aa19.01■□□□□ 0.63
ERCC3-205ENST00000460485 IDI1Q13907 227 aa19.01■□□□□ 0.63
ERCC3-205ENST00000460485 NWD1Q149M9 1564 aa19.01■□□□□ 0.63
ERCC3-205ENST00000460485 PANK3Q9H999 370 aa19■□□□□ 0.63
ERCC3-205ENST00000460485 KNSTRNQ9Y448 316 aa19■□□□□ 0.63
ERCC3-205ENST00000460485 NCOA3Q9Y6Q9 1424 aa19■□□□□ 0.63
ERCC3-205ENST00000460485 CDK12Q9NYV4 1490 aaPredicted RBP18.99■□□□□ 0.63
ERCC3-205ENST00000460485 MEX3CQ5U5Q3 659 aaKnown RBP18.99■□□□□ 0.63
ERCC3-205ENST00000460485 COL16A1Q07092 1604 aaPredicted RBP18.99■□□□□ 0.63
ERCC3-205ENST00000460485 SMG6Q86US8 1419 aaKnown RBP18.99■□□□□ 0.63
ERCC3-205ENST00000460485 NINLQ9Y2I6 1382 aa18.98■□□□□ 0.63
ERCC3-205ENST00000460485 LRP6O75581 1613 aa18.97■□□□□ 0.63
ERCC3-205ENST00000460485 DLC1Q96QB1 1528 aa18.95■□□□□ 0.62
ERCC3-205ENST00000460485 BLMP54132 1417 aaPredicted RBP18.95■□□□□ 0.62
ERCC3-205ENST00000460485 SRCAPQ6ZRS2 3230 aa18.94■□□□□ 0.62
ERCC3-205ENST00000460485 CHD2O14647 1828 aaKnown RBP18.93■□□□□ 0.62
ERCC3-205ENST00000460485 KNDC1Q76NI1 1749 aa18.92■□□□□ 0.62
ERCC3-205ENST00000460485 HDGFP51858 240 aaKnown RBP18.92■□□□□ 0.62
ERCC3-205ENST00000460485 CADPS2Q86UW7 1296 aa18.92■□□□□ 0.62
ERCC3-205ENST00000460485 SHPRHQ149N8 1683 aa18.92■□□□□ 0.62
ERCC3-205ENST00000460485 BCANQ96GW7 911 aa18.91■□□□□ 0.62
ERCC3-205ENST00000460485 AHDC1Q5TGY3 1603 aaPredicted RBP18.9■□□□□ 0.62
ERCC3-205ENST00000460485 PDE3BQ13370 1112 aa18.9■□□□□ 0.62
ERCC3-205ENST00000460485 AMER1Q5JTC6 1135 aaPredicted RBP18.9■□□□□ 0.62
ERCC3-205ENST00000460485 C19orf44Q9H6X5 657 aa18.9■□□□□ 0.62
ERCC3-205ENST00000460485 TBX22Q9Y458 520 aa18.9■□□□□ 0.62
ERCC3-205ENST00000460485 NSD2O96028 1365 aa18.9■□□□□ 0.62
ERCC3-205ENST00000460485 FKBP8Q14318 412 aa18.89■□□□□ 0.61
ERCC3-205ENST00000460485 EVC2Q86UK5 1308 aa18.89■□□□□ 0.61
ERCC3-205ENST00000460485 TULP4Q9NRJ4 1543 aa18.89■□□□□ 0.61
ERCC3-205ENST00000460485 NUDCQ9Y266 331 aa18.88■□□□□ 0.61
ERCC3-205ENST00000460485 PLEKHG1Q9ULL1 1385 aa18.88■□□□□ 0.61
ERCC3-205ENST00000460485 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.87■□□□□ 0.61
ERCC3-205ENST00000460485 ANKRD26Q9UPS8 1709 aa18.87■□□□□ 0.61
ERCC3-205ENST00000460485 YTHDC2Q9H6S0 1430 aaKnown RBP18.86■□□□□ 0.61
ERCC3-205ENST00000460485 ATF3P18847 181 aa18.86■□□□□ 0.61
ERCC3-205ENST00000460485 RIMS2Q9UQ26 1411 aa18.85■□□□□ 0.61
ERCC3-205ENST00000460485 CC2D1BQ5T0F9 858 aaKnown RBP18.85■□□□□ 0.61
ERCC3-205ENST00000460485 ATAD2Q6PL18 1390 aa18.84■□□□□ 0.61
ERCC3-205ENST00000460485 AFF2P51816 1311 aa18.83■□□□□ 0.61
ERCC3-205ENST00000460485 RBM6P78332 1123 aaKnown RBP18.83■□□□□ 0.6
ERCC3-205ENST00000460485 C14orf37Q86TY3 774 aa18.83■□□□□ 0.6
ERCC3-205ENST00000460485 NGEFQ8N5V2 710 aa18.83■□□□□ 0.6
ERCC3-205ENST00000460485 TRAK1Q9UPV9 953 aa18.83■□□□□ 0.6
ERCC3-205ENST00000460485 ANKRD36BQ8N2N9 1353 aa18.82■□□□□ 0.6
ERCC3-205ENST00000460485 PPP2R1AP30153 589 aa18.82■□□□□ 0.6
ERCC3-205ENST00000460485 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.82■□□□□ 0.6
ERCC3-205ENST00000460485 NRXN3Q9Y4C0 1643 aa18.82■□□□□ 0.6
ERCC3-205ENST00000460485 PIK3R4Q99570 1358 aa18.81■□□□□ 0.6
ERCC3-205ENST00000460485 QTRT2Q9H974 415 aaKnown RBP18.81■□□□□ 0.6
ERCC3-205ENST00000460485 DIP2AQ14689 1571 aa18.81■□□□□ 0.6
ERCC3-205ENST00000460485 NUTM2BA6NNL0 878 aaPredicted RBP18.8■□□□□ 0.6
ERCC3-205ENST00000460485 NUTM2EB1AL46 878 aaPredicted RBP18.8■□□□□ 0.6
ERCC3-205ENST00000460485 BRINP3Q76B58 766 aa18.8■□□□□ 0.6
ERCC3-205ENST00000460485 NUTM2AQ8IVF1 878 aaPredicted RBP18.8■□□□□ 0.6
ERCC3-205ENST00000460485 CGNL1Q0VF96 1302 aa18.78■□□□□ 0.6
ERCC3-205ENST00000460485 NSD3Q9BZ95 1437 aa18.78■□□□□ 0.6
ERCC3-205ENST00000460485 WDR43Q15061 677 aaKnown RBP eCLIP18.78■□□□□ 0.6
ERCC3-205ENST00000460485 LRRC59Q96AG4 307 aaKnown RBP18.78■□□□□ 0.6
ERCC3-205ENST00000460485 POLR3AO14802 1390 aaPredicted RBP18.78■□□□□ 0.6
ERCC3-205ENST00000460485 RNF123Q5XPI4 1314 aa18.77■□□□□ 0.6
ERCC3-205ENST00000460485 CNGB1Q14028 1251 aaPredicted RBP18.77■□□□□ 0.6
ERCC3-205ENST00000460485 KIF20BQ96Q89 1820 aa18.77■□□□□ 0.59
ERCC3-205ENST00000460485 RGS12O14924 1447 aa18.76■□□□□ 0.59
ERCC3-205ENST00000460485 TECPR2O15040 1411 aa18.76■□□□□ 0.59
ERCC3-205ENST00000460485 TMEM132EQ6IEE7 984 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 726.2 ms