RNA–Protein interactions for RNA: ENST00000459990.5

SYN3-205, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-205ENST00000459990 PIK3C2GO75747 1445 aa14.8□□□□□ -0.04
SYN3-205ENST00000459990 RGPD8O14715 1765 aaPredicted RBP14.8□□□□□ -0.04
SYN3-205ENST00000459990 SOS2Q07890 1332 aaPredicted RBP14.79□□□□□ -0.04
SYN3-205ENST00000459990 LRRC59Q96AG4 307 aaKnown RBP14.79□□□□□ -0.04
SYN3-205ENST00000459990 MYOM2P54296 1465 aa14.78□□□□□ -0.04
SYN3-205ENST00000459990 UPF1Q92900 1129 aaKnown RBP eCLIP14.78□□□□□ -0.04
SYN3-205ENST00000459990 PLEKHH1Q9ULM0 1364 aa14.77□□□□□ -0.04
SYN3-205ENST00000459990 C8orf37Q96NL8 207 aa14.77□□□□□ -0.05
SYN3-205ENST00000459990 RXRBP28702 533 aa14.76□□□□□ -0.05
SYN3-205ENST00000459990 KIF1AQ12756 1690 aa14.75□□□□□ -0.05
SYN3-205ENST00000459990 NRXN1Q9ULB1 1477 aa14.75□□□□□ -0.05
SYN3-205ENST00000459990 EP400Q96L91 3159 aa14.75□□□□□ -0.05
SYN3-205ENST00000459990 ABCA3Q99758 1704 aa14.75□□□□□ -0.05
SYN3-205ENST00000459990 LRPPRCP42704 1394 aaKnown RBP14.74□□□□□ -0.05
SYN3-205ENST00000459990 MPHOSPH9Q99550 1183 aa14.74□□□□□ -0.05
SYN3-205ENST00000459990 ANKRD30BQ9BXX2 1392 aa14.73□□□□□ -0.05
SYN3-205ENST00000459990 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.73□□□□□ -0.05
SYN3-205ENST00000459990 ADAMTS2O95450 1211 aa14.73□□□□□ -0.05
SYN3-205ENST00000459990 RGL3Q3MIN7 710 aa14.73□□□□□ -0.05
SYN3-205ENST00000459990 WAPLQ7Z5K2 1190 aa14.72□□□□□ -0.05
SYN3-205ENST00000459990 USP32Q8NFA0 1604 aa14.72□□□□□ -0.05
SYN3-205ENST00000459990 YTHDC2Q9H6S0 1430 aaKnown RBP14.72□□□□□ -0.05
SYN3-205ENST00000459990 TMEM132EQ6IEE7 984 aa14.71□□□□□ -0.05
SYN3-205ENST00000459990 ABCC11Q96J66 1382 aa14.71□□□□□ -0.06
SYN3-205ENST00000459990 ATRNO75882 1429 aa14.7□□□□□ -0.06
SYN3-205ENST00000459990 XPCQ01831 940 aaPredicted RBP14.7□□□□□ -0.06
SYN3-205ENST00000459990 STK26Q9P289 416 aa14.7□□□□□ -0.06
SYN3-205ENST00000459990 NUTM2FA1L443 756 aa14.69□□□□□ -0.06
SYN3-205ENST00000459990 QTRT2Q9H974 415 aaKnown RBP14.69□□□□□ -0.06
SYN3-205ENST00000459990 BCL9LQ86UU0 1499 aa14.69□□□□□ -0.06
SYN3-205ENST00000459990 ADGRB1O14514 1584 aa14.68□□□□□ -0.06
SYN3-205ENST00000459990 NPHP3Q7Z494 1330 aa14.68□□□□□ -0.06
SYN3-205ENST00000459990 RBM6P78332 1123 aaKnown RBP14.68□□□□□ -0.06
SYN3-205ENST00000459990 ESCO1Q5FWF5 840 aa14.68□□□□□ -0.06
SYN3-205ENST00000459990 ADGRB2O60241 1585 aa14.68□□□□□ -0.06
SYN3-205ENST00000459990 GLI3P10071 1580 aa14.68□□□□□ -0.06
SYN3-205ENST00000459990 PLCH1Q4KWH8 1693 aa14.68□□□□□ -0.06
SYN3-205ENST00000459990 FOXO3O43524 673 aa14.67□□□□□ -0.06
SYN3-205ENST00000459990 NGLY1Q96IV0 654 aa14.67□□□□□ -0.06
SYN3-205ENST00000459990 RAB3GAP2Q9H2M9 1393 aa14.66□□□□□ -0.06
SYN3-205ENST00000459990 FNBP4Q8N3X1 1017 aaPredicted RBP14.66□□□□□ -0.06
SYN3-205ENST00000459990 BRWD3Q6RI45 1802 aa14.66□□□□□ -0.06
SYN3-205ENST00000459990 TRPM3Q9HCF6 1732 aaPredicted RBP14.66□□□□□ -0.06
SYN3-205ENST00000459990 DLC1Q96QB1 1528 aa14.66□□□□□ -0.06
SYN3-205ENST00000459990 USP21Q9UK80 565 aa14.65□□□□□ -0.06
SYN3-205ENST00000459990 SLIT2O94813 1529 aa14.64□□□□□ -0.07
SYN3-205ENST00000459990 CRYBG1Q9Y4K1 1723 aa14.63□□□□□ -0.07
SYN3-205ENST00000459990 CFAP70Q5T0N1 1121 aa14.63□□□□□ -0.07
SYN3-205ENST00000459990 C14orf93Q9H972 538 aaKnown RBP14.63□□□□□ -0.07
SYN3-205ENST00000459990 ARHGEF28Q8N1W1 1705 aaKnown RBP14.63□□□□□ -0.07
SYN3-205ENST00000459990 ALS2Q96Q42 1657 aa14.62□□□□□ -0.07
SYN3-205ENST00000459990 TNS3Q68CZ2 1445 aa14.62□□□□□ -0.07
SYN3-205ENST00000459990 NRAPQ86VF7 1730 aa14.62□□□□□ -0.07
SYN3-205ENST00000459990 TRPC5Q9UL62 973 aaPredicted RBP14.62□□□□□ -0.07
SYN3-205ENST00000459990 NWD2Q9ULI1 1742 aa14.62□□□□□ -0.07
SYN3-205ENST00000459990 SPATA31A3Q5VYP0 1347 aa14.62□□□□□ -0.07
SYN3-205ENST00000459990 SRCAPQ6ZRS2 3230 aa14.62□□□□□ -0.07
SYN3-205ENST00000459990 ATAD2Q6PL18 1390 aa14.6□□□□□ -0.07
SYN3-205ENST00000459990 RALGAPBQ86X10 1494 aa14.59□□□□□ -0.07
SYN3-205ENST00000459990 SIRT1Q96EB6 747 aa14.58□□□□□ -0.08
SYN3-205ENST00000459990 PRAM1Q96QH2 718 aa14.58□□□□□ -0.08
SYN3-205ENST00000459990 DHX57Q6P158 1386 aaKnown RBP14.58□□□□□ -0.08
SYN3-205ENST00000459990 SAFB2Q14151 953 aaKnown RBP eCLIP14.57□□□□□ -0.08
SYN3-205ENST00000459990 ANKARQ7Z5J8 1434 aa14.57□□□□□ -0.08
SYN3-205ENST00000459990 TULP4Q9NRJ4 1543 aa14.56□□□□□ -0.08
SYN3-205ENST00000459990 KRT28Q7Z3Y7 464 aa14.56□□□□□ -0.08
SYN3-205ENST00000459990 TOPAZ1Q8N9V7 1692 aa14.55□□□□□ -0.08
SYN3-205ENST00000459990 GJD4Q96KN9 370 aaPredicted RBP14.55□□□□□ -0.08
SYN3-205ENST00000459990 PHF8Q9UPP1 1060 aa14.55□□□□□ -0.08
SYN3-205ENST00000459990 ITSN1Q15811 1721 aa14.55□□□□□ -0.08
SYN3-205ENST00000459990 CABLES1Q8TDN4 633 aa14.54□□□□□ -0.08
SYN3-205ENST00000459990 PRR36Q9H6K5 1346 aa14.54□□□□□ -0.08
SYN3-205ENST00000459990 SBNO1A3KN83 1393 aa14.54□□□□□ -0.08
SYN3-205ENST00000459990 PHRF1Q9P1Y6 1649 aaKnown RBP14.53□□□□□ -0.08
SYN3-205ENST00000459990 ATP7BP35670 1465 aa14.52□□□□□ -0.08
SYN3-205ENST00000459990 UNC5CLQ8IV45 518 aa14.52□□□□□ -0.09
SYN3-205ENST00000459990 COL14A1Q05707 1796 aaKnown RBP14.52□□□□□ -0.09
SYN3-205ENST00000459990 ACIN1Q9UKV3 1341 aaKnown RBP14.51□□□□□ -0.09
SYN3-205ENST00000459990 PLEKHG5O94827 1062 aa14.51□□□□□ -0.09
SYN3-205ENST00000459990 PMFBP1Q8TBY8 1022 aa14.51□□□□□ -0.09
SYN3-205ENST00000459990 HIRIP3Q9BW71 556 aaPredicted RBP14.51□□□□□ -0.09
SYN3-205ENST00000459990 TRAK1Q9UPV9 953 aa14.51□□□□□ -0.09
SYN3-205ENST00000459990 ARHGEF10O15013 1369 aa14.5□□□□□ -0.09
SYN3-205ENST00000459990 KIAA1210Q9ULL0 1709 aa14.5□□□□□ -0.09
SYN3-205ENST00000459990 MINK1Q8N4C8 1332 aaPredicted RBP14.49□□□□□ -0.09
SYN3-205ENST00000459990 DCAF11Q8TEB1 546 aa14.48□□□□□ -0.09
SYN3-205ENST00000459990 POGKQ9P215 609 aa14.48□□□□□ -0.09
SYN3-205ENST00000459990 THSD7AQ9UPZ6 1657 aa14.48□□□□□ -0.09
SYN3-205ENST00000459990 KDM2AQ9Y2K7 1162 aa14.47□□□□□ -0.09
SYN3-205ENST00000459990 PSME1Q06323 249 aa14.46□□□□□ -0.09
SYN3-205ENST00000459990 BLMP54132 1417 aaPredicted RBP14.46□□□□□ -0.09
SYN3-205ENST00000459990 TNS1Q9HBL0 1735 aaKnown RBP14.46□□□□□ -0.1
SYN3-205ENST00000459990 FAM83GA6ND36 823 aa14.45□□□□□ -0.1
SYN3-205ENST00000459990 VPS72Q15906 364 aa14.45□□□□□ -0.1
SYN3-205ENST00000459990 LMOD2Q6P5Q4 547 aa14.45□□□□□ -0.1
SYN3-205ENST00000459990 NRKQ7Z2Y5 1582 aa14.44□□□□□ -0.1
SYN3-205ENST00000459990 WASLO00401 505 aaPredicted RBP14.44□□□□□ -0.1
SYN3-205ENST00000459990 HAP1P54257 671 aaPredicted RBP14.44□□□□□ -0.1
SYN3-205ENST00000459990 SEPT12Q8IYM1 358 aa14.44□□□□□ -0.1
SYN3-205ENST00000459990 EIF3AQ14152 1382 aaKnown RBP14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms