RNA–Protein interactions for RNA: ENST00000459918.1

HPS4-207, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-207ENST00000459918 TRPC5Q9UL62 973 aaPredicted RBP12.02□□□□□ -0.49
HPS4-207ENST00000459918 MARF1Q9Y4F3 1742 aaKnown RBP12.02□□□□□ -0.49
HPS4-207ENST00000459918 LAMC1P11047 1609 aa12□□□□□ -0.49
HPS4-207ENST00000459918 EP400Q96L91 3159 aa12□□□□□ -0.49
HPS4-207ENST00000459918 PTCH1Q13635 1447 aa12□□□□□ -0.49
HPS4-207ENST00000459918 COL22A1Q8NFW1 1626 aaPredicted RBP12□□□□□ -0.49
HPS4-207ENST00000459918 ORAI2Q96SN7 254 aa11.99□□□□□ -0.49
HPS4-207ENST00000459918 ESCO1Q5FWF5 840 aa11.97□□□□□ -0.49
HPS4-207ENST00000459918 PPARGC1BQ86YN6 1023 aaKnown RBP11.97□□□□□ -0.49
HPS4-207ENST00000459918 ROBO2Q9HCK4 1378 aa11.96□□□□□ -0.49
HPS4-207ENST00000459918 SOS2Q07890 1332 aaPredicted RBP11.96□□□□□ -0.49
HPS4-207ENST00000459918 NPHP3Q7Z494 1330 aa11.96□□□□□ -0.49
HPS4-207ENST00000459918 VGFO15240 615 aaPredicted RBP11.96□□□□□ -0.49
HPS4-207ENST00000459918 PPLO60437 1756 aa11.96□□□□□ -0.49
HPS4-207ENST00000459918 ATRNO75882 1429 aa11.95□□□□□ -0.5
HPS4-207ENST00000459918 HAP1P54257 671 aaPredicted RBP11.95□□□□□ -0.5
HPS4-207ENST00000459918 XPCQ01831 940 aaPredicted RBP11.95□□□□□ -0.5
HPS4-207ENST00000459918 CDC42BPGQ6DT37 1551 aa11.95□□□□□ -0.5
HPS4-207ENST00000459918 HFM1A2PYH4 1435 aa11.94□□□□□ -0.5
HPS4-207ENST00000459918 NCBP3Q53F19 620 aaKnown RBP11.94□□□□□ -0.5
HPS4-207ENST00000459918 FNBP4Q8N3X1 1017 aaPredicted RBP11.94□□□□□ -0.5
HPS4-207ENST00000459918 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.94□□□□□ -0.5
HPS4-207ENST00000459918 LRPPRCP42704 1394 aaKnown RBP11.93□□□□□ -0.5
HPS4-207ENST00000459918 NUTM2FA1L443 756 aa11.93□□□□□ -0.5
HPS4-207ENST00000459918 SF3B2Q13435 895 aaKnown RBP11.93□□□□□ -0.5
HPS4-207ENST00000459918 CCDC125Q86Z20 511 aa11.93□□□□□ -0.5
HPS4-207ENST00000459918 MYOM2P54296 1465 aa11.92□□□□□ -0.5
HPS4-207ENST00000459918 FOXO3O43524 673 aa11.92□□□□□ -0.5
HPS4-207ENST00000459918 PLEKHG5O94827 1062 aa11.92□□□□□ -0.5
HPS4-207ENST00000459918 BRWD3Q6RI45 1802 aa11.91□□□□□ -0.5
HPS4-207ENST00000459918 PXDNQ92626 1479 aa11.91□□□□□ -0.5
HPS4-207ENST00000459918 GJD4Q96KN9 370 aaPredicted RBP11.91□□□□□ -0.5
HPS4-207ENST00000459918 KIF1AQ12756 1690 aa11.91□□□□□ -0.5
HPS4-207ENST00000459918 BCL9LQ86UU0 1499 aa11.9□□□□□ -0.5
HPS4-207ENST00000459918 A0A0G2JS52 829 aa11.9□□□□□ -0.5
HPS4-207ENST00000459918 MYT1Q01538 1121 aa11.9□□□□□ -0.5
HPS4-207ENST00000459918 STK26Q9P289 416 aa11.9□□□□□ -0.5
HPS4-207ENST00000459918 CCDC9Q9Y3X0 531 aaKnown RBP11.9□□□□□ -0.5
HPS4-207ENST00000459918 RPGRIP1LQ68CZ1 1315 aa11.89□□□□□ -0.51
HPS4-207ENST00000459918 BLMP54132 1417 aaPredicted RBP11.89□□□□□ -0.51
HPS4-207ENST00000459918 NAIPQ13075 1403 aa11.89□□□□□ -0.51
HPS4-207ENST00000459918 USP32Q8NFA0 1604 aa11.89□□□□□ -0.51
HPS4-207ENST00000459918 IFT172Q9UG01 1749 aa11.89□□□□□ -0.51
HPS4-207ENST00000459918 PLCH1Q4KWH8 1693 aa11.88□□□□□ -0.51
HPS4-207ENST00000459918 SLC4A1APQ9BWU0 796 aaKnown RBP11.88□□□□□ -0.51
HPS4-207ENST00000459918 FMN2Q9NZ56 1722 aa11.88□□□□□ -0.51
HPS4-207ENST00000459918 RALGAPBQ86X10 1494 aa11.88□□□□□ -0.51
HPS4-207ENST00000459918 GLI3P10071 1580 aa11.88□□□□□ -0.51
HPS4-207ENST00000459918 PRAG1Q86YV5 1406 aa11.87□□□□□ -0.51
HPS4-207ENST00000459918 KNDC1Q76NI1 1749 aa11.87□□□□□ -0.51
HPS4-207ENST00000459918 UNC5CLQ8IV45 518 aa11.87□□□□□ -0.51
HPS4-207ENST00000459918 RGPD8O14715 1765 aaPredicted RBP11.87□□□□□ -0.51
HPS4-207ENST00000459918 CCDC144AA2RUR9 1427 aa11.86□□□□□ -0.51
HPS4-207ENST00000459918 C1QBPQ07021 282 aaKnown RBP11.86□□□□□ -0.51
HPS4-207ENST00000459918 LMOD2Q6P5Q4 547 aa11.86□□□□□ -0.51
HPS4-207ENST00000459918 RRBP1Q9P2E9 1410 aaKnown RBP11.86□□□□□ -0.51
HPS4-207ENST00000459918 WAPLQ7Z5K2 1190 aa11.85□□□□□ -0.51
HPS4-207ENST00000459918 DEFB132Q7Z7B7 95 aa11.85□□□□□ -0.51
HPS4-207ENST00000459918 NWD2Q9ULI1 1742 aa11.85□□□□□ -0.51
HPS4-207ENST00000459918 ABCA3Q99758 1704 aa11.84□□□□□ -0.51
HPS4-207ENST00000459918 NPM3O75607 178 aaKnown RBP11.84□□□□□ -0.51
HPS4-207ENST00000459918 RGL3Q3MIN7 710 aa11.84□□□□□ -0.51
HPS4-207ENST00000459918 LRP5O75197 1615 aa11.83□□□□□ -0.52
HPS4-207ENST00000459918 SLIT2O94813 1529 aa11.83□□□□□ -0.52
HPS4-207ENST00000459918 KRT28Q7Z3Y7 464 aa11.83□□□□□ -0.52
HPS4-207ENST00000459918 SPATA31A3Q5VYP0 1347 aa11.83□□□□□ -0.52
HPS4-207ENST00000459918 PSME1Q06323 249 aa11.82□□□□□ -0.52
HPS4-207ENST00000459918 SEPT12Q8IYM1 358 aa11.82□□□□□ -0.52
HPS4-207ENST00000459918 TNS3Q68CZ2 1445 aa11.82□□□□□ -0.52
HPS4-207ENST00000459918 ADGRF5Q8IZF2 1346 aa11.82□□□□□ -0.52
HPS4-207ENST00000459918 PSDA5PKW4 1024 aaPredicted RBP11.81□□□□□ -0.52
HPS4-207ENST00000459918 TMEM132EQ6IEE7 984 aa11.81□□□□□ -0.52
HPS4-207ENST00000459918 KRT27Q7Z3Y8 459 aa11.81□□□□□ -0.52
HPS4-207ENST00000459918 CABLES1Q8TDN4 633 aa11.81□□□□□ -0.52
HPS4-207ENST00000459918 PLEKHH1Q9ULM0 1364 aa11.8□□□□□ -0.52
HPS4-207ENST00000459918 RGPD1P0DJD0 1748 aa11.8□□□□□ -0.52
HPS4-207ENST00000459918 TECPR2O15040 1411 aa11.8□□□□□ -0.52
HPS4-207ENST00000459918 BAG6P46379 1132 aa11.8□□□□□ -0.52
HPS4-207ENST00000459918 ANKRD30BQ9BXX2 1392 aa11.79□□□□□ -0.52
HPS4-207ENST00000459918 VPS72Q15906 364 aa11.79□□□□□ -0.52
HPS4-207ENST00000459918 PHF8Q9UPP1 1060 aa11.79□□□□□ -0.52
HPS4-207ENST00000459918 ARHGEF10O15013 1369 aa11.79□□□□□ -0.52
HPS4-207ENST00000459918 YTHDC2Q9H6S0 1430 aaKnown RBP11.78□□□□□ -0.52
HPS4-207ENST00000459918 SAFB2Q14151 953 aaKnown RBP eCLIP11.78□□□□□ -0.52
HPS4-207ENST00000459918 ABCC11Q96J66 1382 aa11.77□□□□□ -0.53
HPS4-207ENST00000459918 NRAPQ86VF7 1730 aa11.77□□□□□ -0.53
HPS4-207ENST00000459918 PIK3C2GO75747 1445 aa11.77□□□□□ -0.53
HPS4-207ENST00000459918 FAM98CQ17RN3 349 aaKnown RBP11.76□□□□□ -0.53
HPS4-207ENST00000459918 COL14A1Q05707 1796 aaKnown RBP11.76□□□□□ -0.53
HPS4-207ENST00000459918 NRXN1Q9ULB1 1477 aa11.76□□□□□ -0.53
HPS4-207ENST00000459918 PMFBP1Q8TBY8 1022 aa11.75□□□□□ -0.53
HPS4-207ENST00000459918 POGKQ9P215 609 aa11.75□□□□□ -0.53
HPS4-207ENST00000459918 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
HPS4-207ENST00000459918 BTG4Q9NY30 223 aa11.74□□□□□ -0.53
HPS4-207ENST00000459918 SBNO1A3KN83 1393 aa11.74□□□□□ -0.53
HPS4-207ENST00000459918 DHX57Q6P158 1386 aaKnown RBP11.74□□□□□ -0.53
HPS4-207ENST00000459918 SPATA31E1Q6ZUB1 1445 aa11.74□□□□□ -0.53
HPS4-207ENST00000459918 PRAM1Q96QH2 718 aa11.73□□□□□ -0.53
HPS4-207ENST00000459918 TNS1Q9HBL0 1735 aaKnown RBP11.72□□□□□ -0.53
HPS4-207ENST00000459918 TRPM3Q9HCF6 1732 aaPredicted RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms