RNA–Protein interactions for RNA: ENST00000459004.1

SCARNA18-201, small Cajal body-specific RNA 18, humanhuman

BASIC

Gene SCARNA18, Length 134 nt, Biotype snoRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA18-201ENST00000459004 NKX2-3Q8TAU0 364 aa6.74□□□□□ -1.33
SCARNA18-201ENST00000459004 SPSB2Q99619 263 aa6.74□□□□□ -1.33
SCARNA18-201ENST00000459004 GOPCQ9HD26 462 aa6.74□□□□□ -1.33
SCARNA18-201ENST00000459004 POLR3EQ9NVU0 708 aa6.74□□□□□ -1.33
SCARNA18-201ENST00000459004 PCDHGC3Q9UN70 934 aa6.74□□□□□ -1.33
SCARNA18-201ENST00000459004 TLL1O43897 1013 aa6.73□□□□□ -1.33
SCARNA18-201ENST00000459004 LIMD1Q9UGP4 676 aa6.73□□□□□ -1.33
SCARNA18-201ENST00000459004 C6orf229H3BNL8 230 aa6.72□□□□□ -1.33
SCARNA18-201ENST00000459004 MTMR2Q13614 643 aa6.72□□□□□ -1.33
SCARNA18-201ENST00000459004 PRPF38BQ5VTL8 546 aaKnown RBP6.72□□□□□ -1.33
SCARNA18-201ENST00000459004 USB1Q9BQ65 265 aaKnown RBP6.72□□□□□ -1.33
SCARNA18-201ENST00000459004 PCDHB15Q9Y5E8 787 aa6.72□□□□□ -1.33
SCARNA18-201ENST00000459004 SPDYE5A6NIY4 337 aa6.71□□□□□ -1.34
SCARNA18-201ENST00000459004 GGCXP38435 758 aa6.71□□□□□ -1.34
SCARNA18-201ENST00000459004 MSS51Q4VC12 460 aa6.71□□□□□ -1.34
SCARNA18-201ENST00000459004 SYMPKQ92797 1274 aaKnown RBP6.71□□□□□ -1.34
SCARNA18-201ENST00000459004 PCMTD1Q96MG8 357 aaPredicted RBP6.71□□□□□ -1.34
SCARNA18-201ENST00000459004 SLC6A16Q9GZN6 736 aa6.71□□□□□ -1.34
SCARNA18-201ENST00000459004 ZBTB3Q9H5J0 574 aa6.71□□□□□ -1.34
SCARNA18-201ENST00000459004 ATP1B4Q9UN42 357 aaPredicted RBP6.71□□□□□ -1.34
SCARNA18-201ENST00000459004 LILRB3O75022 631 aa6.7□□□□□ -1.34
SCARNA18-201ENST00000459004 CSPP1Q1MSJ5 1256 aa6.7□□□□□ -1.34
SCARNA18-201ENST00000459004 RETREG3Q86VR2 466 aa6.7□□□□□ -1.34
SCARNA18-201ENST00000459004 FAM160A2Q8N612 972 aaPredicted RBP6.7□□□□□ -1.34
SCARNA18-201ENST00000459004 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.7□□□□□ -1.34
SCARNA18-201ENST00000459004 A0A0G2JS52 829 aa6.69□□□□□ -1.34
SCARNA18-201ENST00000459004 HRCP23327 699 aa6.69□□□□□ -1.34
SCARNA18-201ENST00000459004 PPP1R18Q6NYC8 613 aa6.69□□□□□ -1.34
SCARNA18-201ENST00000459004 PROCA1Q8NCQ7 364 aaPredicted RBP6.69□□□□□ -1.34
SCARNA18-201ENST00000459004 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.69□□□□□ -1.34
SCARNA18-201ENST00000459004 NUTM2BA6NNL0 878 aaPredicted RBP6.68□□□□□ -1.34
SCARNA18-201ENST00000459004 NUTM2EB1AL46 878 aaPredicted RBP6.68□□□□□ -1.34
SCARNA18-201ENST00000459004 S1PR4O95977 384 aa6.68□□□□□ -1.34
SCARNA18-201ENST00000459004 NUTM2DQ5VT03 806 aaPredicted RBP6.68□□□□□ -1.34
SCARNA18-201ENST00000459004 NUTM2AQ8IVF1 878 aaPredicted RBP6.68□□□□□ -1.34
SCARNA18-201ENST00000459004 CABLES1Q8TDN4 633 aa6.68□□□□□ -1.34
SCARNA18-201ENST00000459004 MMP16P51512 607 aa6.67□□□□□ -1.34
SCARNA18-201ENST00000459004 QPCTQ16769 361 aa6.67□□□□□ -1.34
SCARNA18-201ENST00000459004 TMEM132AQ24JP5 1023 aa6.67□□□□□ -1.34
SCARNA18-201ENST00000459004 PRR7Q8TB68 274 aa6.67□□□□□ -1.34
SCARNA18-201ENST00000459004 JUNDP17535 347 aa6.66□□□□□ -1.34
SCARNA18-201ENST00000459004 RTL5Q5HYW3 569 aaPredicted RBP6.66□□□□□ -1.34
SCARNA18-201ENST00000459004 PPP2R2DQ66LE6 453 aa6.66□□□□□ -1.34
SCARNA18-201ENST00000459004 RNF223E7ERA6 249 aa6.65□□□□□ -1.34
SCARNA18-201ENST00000459004 DXOO77932 396 aaKnown RBP6.65□□□□□ -1.34
SCARNA18-201ENST00000459004 DESI1Q6ICB0 168 aa6.65□□□□□ -1.34
SCARNA18-201ENST00000459004 ANKLE1Q8NAG6 615 aa6.65□□□□□ -1.34
SCARNA18-201ENST00000459004 PRDM9Q9NQV7 894 aa6.65□□□□□ -1.34
SCARNA18-201ENST00000459004 CFAP99D6REC4 459 aa6.64□□□□□ -1.35
SCARNA18-201ENST00000459004 PPEF1O14829 653 aaPredicted RBP6.64□□□□□ -1.35
SCARNA18-201ENST00000459004 RGS20O76081 388 aa6.62□□□□□ -1.35
SCARNA18-201ENST00000459004 RFC5P40937 340 aa6.62□□□□□ -1.35
SCARNA18-201ENST00000459004 FBXO31Q5XUX0 539 aaPredicted RBP6.62□□□□□ -1.35
SCARNA18-201ENST00000459004 HELBQ8NG08 1087 aaPredicted RBP6.62□□□□□ -1.35
SCARNA18-201ENST00000459004 FCF1Q9Y324 198 aaKnown RBP6.62□□□□□ -1.35
SCARNA18-201ENST00000459004 PTPRNQ16849 979 aa6.61□□□□□ -1.35
SCARNA18-201ENST00000459004 TMEM259Q4ZIN3 620 aa6.61□□□□□ -1.35
SCARNA18-201ENST00000459004 LYPD8Q6UX82 237 aa6.61□□□□□ -1.35
SCARNA18-201ENST00000459004 TSC1Q92574 1164 aa6.61□□□□□ -1.35
SCARNA18-201ENST00000459004 CCDC24Q8N4L8 307 aa6.6□□□□□ -1.35
SCARNA18-201ENST00000459004 NUDT12Q9BQG2 462 aa6.6□□□□□ -1.35
SCARNA18-201ENST00000459004 ZBTB24O43167 697 aaPredicted RBP6.59□□□□□ -1.35
SCARNA18-201ENST00000459004 AP1G2O75843 785 aa6.59□□□□□ -1.35
SCARNA18-201ENST00000459004 CCNYL3P0C7X3 344 aa6.59□□□□□ -1.35
SCARNA18-201ENST00000459004 CTDSPL2Q05D32 466 aa6.59□□□□□ -1.35
SCARNA18-201ENST00000459004 EVA1BQ9NVM1 165 aa6.59□□□□□ -1.35
SCARNA18-201ENST00000459004 KCNH2Q12809 1159 aa6.58□□□□□ -1.36
SCARNA18-201ENST00000459004 PLA2G2CQ5R387 149 aa6.58□□□□□ -1.36
SCARNA18-201ENST00000459004 V9GY48 417 aaPredicted RBP6.58□□□□□ -1.36
SCARNA18-201ENST00000459004 PER1O15534 1290 aaPredicted RBP6.57□□□□□ -1.36
SCARNA18-201ENST00000459004 SLC19A1P41440 591 aa6.57□□□□□ -1.36
SCARNA18-201ENST00000459004 RPIAP49247 311 aa6.57□□□□□ -1.36
SCARNA18-201ENST00000459004 LIAT1Q6ZQX7 453 aa6.57□□□□□ -1.36
SCARNA18-201ENST00000459004 BANK1Q8NDB2 785 aa6.57□□□□□ -1.36
SCARNA18-201ENST00000459004 PRKD2Q9BZL6 878 aa6.57□□□□□ -1.36
SCARNA18-201ENST00000459004 CD2BP2O95400 341 aaKnown RBP6.55□□□□□ -1.36
SCARNA18-201ENST00000459004 F12P00748 615 aaPredicted RBP6.55□□□□□ -1.36
SCARNA18-201ENST00000459004 USP17L8P0C7I0 530 aa6.55□□□□□ -1.36
SCARNA18-201ENST00000459004 CTHP32929 405 aa6.55□□□□□ -1.36
SCARNA18-201ENST00000459004 PTCRAQ6ISU1 281 aaPredicted RBP6.55□□□□□ -1.36
SCARNA18-201ENST00000459004 EMID1Q96A84 441 aaPredicted RBP6.55□□□□□ -1.36
SCARNA18-201ENST00000459004 SPRYD7Q5W111 196 aa6.54□□□□□ -1.36
SCARNA18-201ENST00000459004 LRRN4Q8WUT4 740 aa6.54□□□□□ -1.36
SCARNA18-201ENST00000459004 ZNF598Q86UK7 904 aaKnown RBP6.53□□□□□ -1.36
SCARNA18-201ENST00000459004 UNC93B1Q9H1C4 597 aa6.53□□□□□ -1.36
SCARNA18-201ENST00000459004 MAP10Q9P2G4 905 aa6.53□□□□□ -1.36
SCARNA18-201ENST00000459004 TRIM32Q13049 653 aa6.52□□□□□ -1.37
SCARNA18-201ENST00000459004 ARMC2Q8NEN0 867 aa6.52□□□□□ -1.37
SCARNA18-201ENST00000459004 NR6A1Q15406 480 aa6.51□□□□□ -1.37
SCARNA18-201ENST00000459004 SOCS7O14512 581 aa6.5□□□□□ -1.37
SCARNA18-201ENST00000459004 ZNF697Q5TEC3 545 aa6.5□□□□□ -1.37
SCARNA18-201ENST00000459004 BAP1Q92560 729 aa6.5□□□□□ -1.37
SCARNA18-201ENST00000459004 HMX1Q9NP08 348 aaPredicted RBP6.5□□□□□ -1.37
SCARNA18-201ENST00000459004 SNRKQ9NRH2 765 aa6.5□□□□□ -1.37
SCARNA18-201ENST00000459004 APBB1O00213 710 aa6.49□□□□□ -1.37
SCARNA18-201ENST00000459004 WNT7BP56706 349 aa6.49□□□□□ -1.37
SCARNA18-201ENST00000459004 PNMA1Q8ND90 353 aa6.49□□□□□ -1.37
SCARNA18-201ENST00000459004 ZNF511Q8NB15 262 aa6.48□□□□□ -1.37
SCARNA18-201ENST00000459004 GPKOWQ92917 476 aaPredicted RBP eCLIP6.48□□□□□ -1.37
SCARNA18-201ENST00000459004 GJD4Q96KN9 370 aaPredicted RBP6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms