RNA–Protein interactions for RNA: ENST00000458578.6

UBE2L3-202, Transcript of ubiquitin conjugating enzyme E2 L3, humanhuman

TSL 2 BASIC

Gene UBE2L3, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2L3-202ENST00000458578 FOXD4L1Q9NU39 408 aa14.67□□□□□ -0.06
UBE2L3-202ENST00000458578 TSR2Q969E8 191 aaKnown RBP14.67□□□□□ -0.06
UBE2L3-202ENST00000458578 RUNDC1Q96C34 613 aa14.65□□□□□ -0.06
UBE2L3-202ENST00000458578 CLTCL1P53675 1640 aa14.65□□□□□ -0.06
UBE2L3-202ENST00000458578 ABCC1P33527 1531 aa14.65□□□□□ -0.06
UBE2L3-202ENST00000458578 ITPRIPQ8IWB1 547 aa14.65□□□□□ -0.06
UBE2L3-202ENST00000458578 U2AF1L5P0DN76 240 aaPredicted RBP14.64□□□□□ -0.07
UBE2L3-202ENST00000458578 MTHFSP49914 203 aa14.64□□□□□ -0.07
UBE2L3-202ENST00000458578 U2AF1Q01081 240 aaKnown RBP eCLIP14.64□□□□□ -0.07
UBE2L3-202ENST00000458578 CHMP5Q9NZZ3 219 aa14.64□□□□□ -0.07
UBE2L3-202ENST00000458578 CFAP65Q6ZU64 1925 aaKnown RBP14.64□□□□□ -0.07
UBE2L3-202ENST00000458578 CLASP1Q7Z460 1538 aa14.64□□□□□ -0.07
UBE2L3-202ENST00000458578 HSCBQ8IWL3 235 aa14.64□□□□□ -0.07
UBE2L3-202ENST00000458578 RNF17Q9BXT8 1623 aaKnown RBP14.64□□□□□ -0.07
UBE2L3-202ENST00000458578 SYNMO15061 1565 aa14.63□□□□□ -0.07
UBE2L3-202ENST00000458578 ZCCHC11Q5TAX3 1644 aaKnown RBP14.63□□□□□ -0.07
UBE2L3-202ENST00000458578 SMC4Q9NTJ3 1288 aa14.63□□□□□ -0.07
UBE2L3-202ENST00000458578 MVPQ14764 893 aaKnown RBP14.62□□□□□ -0.07
UBE2L3-202ENST00000458578 MYH16Q9H6N6 1097 aa14.62□□□□□ -0.07
UBE2L3-202ENST00000458578 FSD2A1L4K1 749 aa14.62□□□□□ -0.07
UBE2L3-202ENST00000458578 TRPM2O94759 1503 aa14.62□□□□□ -0.07
UBE2L3-202ENST00000458578 IQGAP1P46940 1657 aa14.62□□□□□ -0.07
UBE2L3-202ENST00000458578 DZIP1LQ8IYY4 767 aaKnown RBP14.62□□□□□ -0.07
UBE2L3-202ENST00000458578 VSIG10Q8N0Z9 540 aa14.62□□□□□ -0.07
UBE2L3-202ENST00000458578 NINLQ9Y2I6 1382 aa14.61□□□□□ -0.07
UBE2L3-202ENST00000458578 HSP90AA1P07900 732 aaKnown RBP14.61□□□□□ -0.07
UBE2L3-202ENST00000458578 ZKSCAN2Q63HK3 967 aa14.61□□□□□ -0.07
UBE2L3-202ENST00000458578 ERVK-7P63135 1459 aa14.61□□□□□ -0.07
UBE2L3-202ENST00000458578 PTPRTO14522 1441 aa14.61□□□□□ -0.07
UBE2L3-202ENST00000458578 VIRMAQ69YN4 1812 aaKnown RBP14.61□□□□□ -0.07
UBE2L3-202ENST00000458578 GRPEL1Q9HAV7 217 aa14.6□□□□□ -0.07
UBE2L3-202ENST00000458578 NPC1L1Q9UHC9 1359 aa14.6□□□□□ -0.07
UBE2L3-202ENST00000458578 U2SURPO15042 1029 aaKnown RBP14.6□□□□□ -0.07
UBE2L3-202ENST00000458578 NSD3Q9BZ95 1437 aa14.6□□□□□ -0.07
UBE2L3-202ENST00000458578 HSP90AA2PQ14568 343 aaPredicted RBP14.6□□□□□ -0.07
UBE2L3-202ENST00000458578 FANCAO15360 1455 aa14.6□□□□□ -0.07
UBE2L3-202ENST00000458578 NGEFQ8N5V2 710 aa14.59□□□□□ -0.07
UBE2L3-202ENST00000458578 STAC3Q96MF2 364 aa14.59□□□□□ -0.07
UBE2L3-202ENST00000458578 LNPKQ9C0E8 428 aa14.59□□□□□ -0.07
UBE2L3-202ENST00000458578 MRE11P49959 708 aa14.59□□□□□ -0.07
UBE2L3-202ENST00000458578 TRIM44Q96DX7 344 aaPredicted RBP14.59□□□□□ -0.07
UBE2L3-202ENST00000458578 SPHKAPQ2M3C7 1700 aa14.59□□□□□ -0.07
UBE2L3-202ENST00000458578 ZFYVE16Q7Z3T8 1539 aa14.59□□□□□ -0.07
UBE2L3-202ENST00000458578 CLCN1P35523 988 aa14.58□□□□□ -0.07
UBE2L3-202ENST00000458578 EXOSC9Q06265 439 aaKnown RBP14.58□□□□□ -0.07
UBE2L3-202ENST00000458578 NOS1P29475 1434 aa14.58□□□□□ -0.07
UBE2L3-202ENST00000458578 HSP90AB1P08238 724 aaKnown RBP14.58□□□□□ -0.08
UBE2L3-202ENST00000458578 SHROOM2Q13796 1616 aa14.58□□□□□ -0.08
UBE2L3-202ENST00000458578 CFAP53Q96M91 514 aa14.58□□□□□ -0.08
UBE2L3-202ENST00000458578 STK26Q9P289 416 aa14.58□□□□□ -0.08
UBE2L3-202ENST00000458578 POLR3AO14802 1390 aaPredicted RBP14.57□□□□□ -0.08
UBE2L3-202ENST00000458578 MYOM1P52179 1685 aa14.57□□□□□ -0.08
UBE2L3-202ENST00000458578 ERBB4Q15303 1308 aa14.57□□□□□ -0.08
UBE2L3-202ENST00000458578 TRIM27P14373 513 aa14.57□□□□□ -0.08
UBE2L3-202ENST00000458578 GLIPR1L2Q4G1C9 344 aa14.57□□□□□ -0.08
UBE2L3-202ENST00000458578 WDR63Q8IWG1 891 aa14.57□□□□□ -0.08
UBE2L3-202ENST00000458578 KDM5AP29375 1690 aaKnown RBP14.56□□□□□ -0.08
UBE2L3-202ENST00000458578 ADGRL1O94910 1474 aa14.56□□□□□ -0.08
UBE2L3-202ENST00000458578 ESPNB1AK53 854 aa14.56□□□□□ -0.08
UBE2L3-202ENST00000458578 CABP2Q9NPB3 220 aa14.56□□□□□ -0.08
UBE2L3-202ENST00000458578 RTEL1-TNFRSF6BF6WH68 1400 aa14.56□□□□□ -0.08
UBE2L3-202ENST00000458578 CEP152O94986 1710 aa14.55□□□□□ -0.08
UBE2L3-202ENST00000458578 ATP7AQ04656 1500 aa14.55□□□□□ -0.08
UBE2L3-202ENST00000458578 DDX11L8A8MPP1 907 aa14.55□□□□□ -0.08
UBE2L3-202ENST00000458578 GAS2L3Q86XJ1 694 aa14.55□□□□□ -0.08
UBE2L3-202ENST00000458578 SSH1Q8WYL5 1049 aa14.55□□□□□ -0.08
UBE2L3-202ENST00000458578 TNPO1Q92973 898 aaKnown RBP14.55□□□□□ -0.08
UBE2L3-202ENST00000458578 NOB1Q9ULX3 412 aaKnown RBP14.55□□□□□ -0.08
UBE2L3-202ENST00000458578 TMEM57Q8N5G2 664 aa14.54□□□□□ -0.08
UBE2L3-202ENST00000458578 AAMPQ13685 434 aa14.53□□□□□ -0.08
UBE2L3-202ENST00000458578 SLC24A1O60721 1099 aa14.52□□□□□ -0.08
UBE2L3-202ENST00000458578 PKNOX2Q96KN3 472 aa14.52□□□□□ -0.08
UBE2L3-202ENST00000458578 ABCA6Q8N139 1617 aa14.52□□□□□ -0.09
UBE2L3-202ENST00000458578 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
UBE2L3-202ENST00000458578 C1orf115Q9H7X2 142 aa14.52□□□□□ -0.09
UBE2L3-202ENST00000458578 DDX19BQ9UMR2 479 aa14.51□□□□□ -0.09
UBE2L3-202ENST00000458578 TET3O43151 1660 aa14.51□□□□□ -0.09
UBE2L3-202ENST00000458578 ATF7IPQ6VMQ6 1270 aa14.51□□□□□ -0.09
UBE2L3-202ENST00000458578 ZNF692Q9BU19 519 aaPredicted RBP14.51□□□□□ -0.09
UBE2L3-202ENST00000458578 GGNBP2Q9H3C7 697 aa14.51□□□□□ -0.09
UBE2L3-202ENST00000458578 CD2BP2O95400 341 aaKnown RBP14.5□□□□□ -0.09
UBE2L3-202ENST00000458578 PHF23Q9BUL5 403 aaPredicted RBP14.5□□□□□ -0.09
UBE2L3-202ENST00000458578 ZMYND15Q9H091 742 aa14.5□□□□□ -0.09
UBE2L3-202ENST00000458578 MAP3K4Q9Y6R4 1608 aa14.5□□□□□ -0.09
UBE2L3-202ENST00000458578 SRPK2P78362 688 aaKnown RBP14.5□□□□□ -0.09
UBE2L3-202ENST00000458578 GBP4Q96PP9 640 aa14.5□□□□□ -0.09
UBE2L3-202ENST00000458578 C14orf93Q9H972 538 aaKnown RBP14.5□□□□□ -0.09
UBE2L3-202ENST00000458578 NCLP19338 710 aaKnown RBP14.49□□□□□ -0.09
UBE2L3-202ENST00000458578 ANKRD45Q5TZF3 282 aa14.49□□□□□ -0.09
UBE2L3-202ENST00000458578 NPM1P06748 294 aaKnown RBP eCLIP14.48□□□□□ -0.09
UBE2L3-202ENST00000458578 UHRF1BP1LA0JNW5 1464 aa14.48□□□□□ -0.09
UBE2L3-202ENST00000458578 RAPGEF3O95398 923 aa14.47□□□□□ -0.09
UBE2L3-202ENST00000458578 HDAC1Q13547 482 aaPredicted RBP14.47□□□□□ -0.09
UBE2L3-202ENST00000458578 SSFA2P28290 1259 aa14.47□□□□□ -0.09
UBE2L3-202ENST00000458578 ELL2O00472 640 aaPredicted RBP14.47□□□□□ -0.09
UBE2L3-202ENST00000458578 TMPOP42166 694 aaKnown RBP14.46□□□□□ -0.09
UBE2L3-202ENST00000458578 RIPK4P57078 832 aa14.46□□□□□ -0.09
UBE2L3-202ENST00000458578 SMC5Q8IY18 1101 aa14.46□□□□□ -0.09
UBE2L3-202ENST00000458578 KIF1BO60333 1816 aa14.46□□□□□ -0.09
UBE2L3-202ENST00000458578 FBLN1P23142 703 aa14.46□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms